RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 DEFB4AO15263 64 aa13.76□□□□□ -0.21
PACSIN3-208ENST00000531226 UBE2L3P68036 154 aaKnown RBP13.76□□□□□ -0.21
PACSIN3-208ENST00000531226 SERF2P84101 59 aa13.76□□□□□ -0.21
PACSIN3-208ENST00000531226 SPINK13Q1W4C9 94 aa13.76□□□□□ -0.21
PACSIN3-208ENST00000531226 FAM122CQ6P4D5 195 aa13.76□□□□□ -0.21
PACSIN3-208ENST00000531226 Q6ZNX1 250 aa13.76□□□□□ -0.21
PACSIN3-208ENST00000531226 OR10G4Q8NGN3 311 aa13.76□□□□□ -0.21
PACSIN3-208ENST00000531226 OR10G9Q8NGN4 311 aa13.76□□□□□ -0.21
PACSIN3-208ENST00000531226 OR10G7Q8NGN6 311 aa13.76□□□□□ -0.21
PACSIN3-208ENST00000531226 OR10J6PQ8NGY7 276 aa13.76□□□□□ -0.21
PACSIN3-208ENST00000531226 IGF2BP2-AS1Q96M15 143 aa13.76□□□□□ -0.21
PACSIN3-208ENST00000531226 SH3BGRL3Q9H299 93 aa13.76□□□□□ -0.21
PACSIN3-208ENST00000531226 AAMDCQ9H7C9 122 aa13.76□□□□□ -0.21
PACSIN3-208ENST00000531226 M0R2Z0 102 aa13.75□□□□□ -0.21
PACSIN3-208ENST00000531226 M0R3E3 92 aa13.75□□□□□ -0.21
PACSIN3-208ENST00000531226 ZNF345Q14585 488 aa13.75□□□□□ -0.21
PACSIN3-208ENST00000531226 EXOC3-AS1Q8N2X6 119 aa13.75□□□□□ -0.21
PACSIN3-208ENST00000531226 GNPNAT1Q96EK6 184 aaPredicted RBP13.75□□□□□ -0.21
PACSIN3-208ENST00000531226 PHYHIPLQ96FC7 376 aa13.75□□□□□ -0.21
PACSIN3-208ENST00000531226 NEU1Q99519 415 aa13.75□□□□□ -0.21
PACSIN3-208ENST00000531226 GOLT1BQ9Y3E0 138 aa13.75□□□□□ -0.21
PACSIN3-208ENST00000531226 HMSDA8MTL9 139 aa13.74□□□□□ -0.21
PACSIN3-208ENST00000531226 CRXO43186 299 aaPredicted RBP13.74□□□□□ -0.21
PACSIN3-208ENST00000531226 EIF3GO75821 320 aaKnown RBP eCLIP13.74□□□□□ -0.21
PACSIN3-208ENST00000531226 MBP02144 154 aa13.74□□□□□ -0.21
PACSIN3-208ENST00000531226 RBMY1A1P0DJD3 496 aaKnown RBP13.74□□□□□ -0.21
PACSIN3-208ENST00000531226 RBMY1CP0DJD4 496 aa13.74□□□□□ -0.21
PACSIN3-208ENST00000531226 CDC34P49427 236 aaPredicted RBP13.74□□□□□ -0.21
PACSIN3-208ENST00000531226 RBMY1FQ15415 496 aaKnown RBP13.74□□□□□ -0.21
PACSIN3-208ENST00000531226 PQLC2Q6ZP29 291 aa13.74□□□□□ -0.21
PACSIN3-208ENST00000531226 C1orf158Q8N1D5 194 aa13.74□□□□□ -0.21
PACSIN3-208ENST00000531226 OR11H4Q8NGC9 324 aa13.74□□□□□ -0.21
PACSIN3-208ENST00000531226 PPP1R14DQ9NXH3 145 aa13.74□□□□□ -0.21
PACSIN3-208ENST00000531226 IGHV3OR16-12A0A075B7B8 117 aa13.73□□□□□ -0.21
PACSIN3-208ENST00000531226 NPIPB6E9PJ23 425 aa13.73□□□□□ -0.21
PACSIN3-208ENST00000531226 JTBO76095 146 aa13.73□□□□□ -0.21
PACSIN3-208ENST00000531226 INSP01308 110 aa13.73□□□□□ -0.21
PACSIN3-208ENST00000531226 ICAM4Q14773 271 aa13.73□□□□□ -0.21
PACSIN3-208ENST00000531226 RPP25LQ8N5L8 163 aaKnown RBP13.73□□□□□ -0.21
PACSIN3-208ENST00000531226 SMIM9A6NGZ8 99 aa13.72□□□□□ -0.21
PACSIN3-208ENST00000531226 CDKN1BP46527 198 aa13.72□□□□□ -0.21
PACSIN3-208ENST00000531226 BAP18Q8IXM2 172 aa13.72□□□□□ -0.21
PACSIN3-208ENST00000531226 LYPD1Q8N2G4 141 aa13.72□□□□□ -0.21
PACSIN3-208ENST00000531226 KCNRGQ8N5I3 272 aa13.72□□□□□ -0.21
PACSIN3-208ENST00000531226 CYTL1Q9NRR1 136 aa13.72□□□□□ -0.21
PACSIN3-208ENST00000531226 TRAV12-2A0A075B6T6 113 aa13.71□□□□□ -0.21
PACSIN3-208ENST00000531226 PMS2P11Q13670 270 aa13.71□□□□□ -0.21
PACSIN3-208ENST00000531226 C11orf45Q8TAV5 145 aa13.71□□□□□ -0.21
PACSIN3-208ENST00000531226 ST6GAL2Q96JF0 529 aa13.71□□□□□ -0.21
PACSIN3-208ENST00000531226 ODF3Q96PU9 254 aa13.71□□□□□ -0.21
PACSIN3-208ENST00000531226 ARPC5LQ9BPX5 153 aa13.71□□□□□ -0.21
PACSIN3-208ENST00000531226 HMGB3O15347 200 aaKnown RBP13.7□□□□□ -0.22
PACSIN3-208ENST00000531226 STAG3L2P0CL84 134 aa13.7□□□□□ -0.22
PACSIN3-208ENST00000531226 STAG3L3P0CL85 134 aa13.7□□□□□ -0.22
PACSIN3-208ENST00000531226 RANP62826 216 aaKnown RBP13.7□□□□□ -0.22
PACSIN3-208ENST00000531226 RAB24Q969Q5 203 aa13.7□□□□□ -0.22
PACSIN3-208ENST00000531226 TMEM208Q9BTX3 173 aa13.7□□□□□ -0.22
PACSIN3-208ENST00000531226 Q9H3A6 140 aa13.7□□□□□ -0.22
PACSIN3-208ENST00000531226 CSMD3Q7Z407 3707 aa13.69□□□□□ -0.22
PACSIN3-208ENST00000531226 A0A0D9SG52 128 aa13.69□□□□□ -0.22
PACSIN3-208ENST00000531226 CXorf65A6NEN9 183 aa13.69□□□□□ -0.22
PACSIN3-208ENST00000531226 HBE1P02100 147 aa13.69□□□□□ -0.22
PACSIN3-208ENST00000531226 ARL14EPLP0DKL9 152 aa13.69□□□□□ -0.22
PACSIN3-208ENST00000531226 TSPOP30536 169 aa13.69□□□□□ -0.22
PACSIN3-208ENST00000531226 ACTR3CQ9C0K3 210 aaPredicted RBP13.69□□□□□ -0.22
PACSIN3-208ENST00000531226 CT45A10P0DMU9 189 aa13.68□□□□□ -0.22
PACSIN3-208ENST00000531226 NANOS2P60321 138 aaKnown RBP13.68□□□□□ -0.22
PACSIN3-208ENST00000531226 TCTE3Q8IZS6 198 aa13.68□□□□□ -0.22
PACSIN3-208ENST00000531226 STARD9Q9P2P6 4700 aa13.68□□□□□ -0.22
PACSIN3-208ENST00000531226 KMT2CQ8NEZ4 4911 aaKnown RBP13.67□□□□□ -0.22
PACSIN3-208ENST00000531226 IGKV2-40A0A087WW87 121 aaPredicted RBP13.67□□□□□ -0.22
PACSIN3-208ENST00000531226 TMEM189A5PLL7 270 aa13.67□□□□□ -0.22
PACSIN3-208ENST00000531226 NUPR2A6NF83 97 aa13.67□□□□□ -0.22
PACSIN3-208ENST00000531226 IGKV2D-40P01614 121 aaPredicted RBP13.67□□□□□ -0.22
PACSIN3-208ENST00000531226 LEPP41159 167 aa13.67□□□□□ -0.22
PACSIN3-208ENST00000531226 ERCC8Q13216 396 aa13.67□□□□□ -0.22
PACSIN3-208ENST00000531226 RRN3P1Q2M238 152 aa13.67□□□□□ -0.22
PACSIN3-208ENST00000531226 C9orf47Q6ZRZ4 202 aa13.67□□□□□ -0.22
PACSIN3-208ENST00000531226 TMEM256Q8N2U0 113 aa13.67□□□□□ -0.22
PACSIN3-208ENST00000531226 LINC00477Q96M19 166 aa13.67□□□□□ -0.22
PACSIN3-208ENST00000531226 KANTRA0A1W2PQU2 76 aa13.66□□□□□ -0.22
PACSIN3-208ENST00000531226 BCL2L11O43521 198 aa13.66□□□□□ -0.22
PACSIN3-208ENST00000531226 CSN1S1P47710 185 aa13.66□□□□□ -0.22
PACSIN3-208ENST00000531226 KIR3DS1Q14943 382 aa13.66□□□□□ -0.22
PACSIN3-208ENST00000531226 AKR1C8PQ5T2L2 129 aa13.66□□□□□ -0.22
PACSIN3-208ENST00000531226 SSX7Q7RTT5 188 aa13.66□□□□□ -0.22
PACSIN3-208ENST00000531226 C20orf144Q9BQM9 153 aa13.66□□□□□ -0.22
PACSIN3-208ENST00000531226 AGPAT4-IT1Q9H0P7 198 aa13.66□□□□□ -0.22
PACSIN3-208ENST00000531226 OTORQ9NRC9 128 aa13.66□□□□□ -0.22
PACSIN3-208ENST00000531226 CELA1Q9UNI1 258 aa13.66□□□□□ -0.22
PACSIN3-208ENST00000531226 CTXND1A0A1B0GTU2 59 aa13.65□□□□□ -0.22
PACSIN3-208ENST00000531226 LOC102723971A0A1B0GUV8 181 aa13.65□□□□□ -0.22
PACSIN3-208ENST00000531226 CXorf1O96002 111 aa13.65□□□□□ -0.22
PACSIN3-208ENST00000531226 GCHFRP30047 84 aa13.65□□□□□ -0.22
PACSIN3-208ENST00000531226 FAM74A1Q5RGS3 127 aa13.65□□□□□ -0.22
PACSIN3-208ENST00000531226 TMEM78Q5T7P6 136 aa13.65□□□□□ -0.22
PACSIN3-208ENST00000531226 GFI1BQ5VTD9 330 aa13.65□□□□□ -0.22
PACSIN3-208ENST00000531226 SUN5Q8TC36 379 aa13.65□□□□□ -0.22
PACSIN3-208ENST00000531226 RXFP4Q8TDU9 374 aa13.65□□□□□ -0.22
PACSIN3-208ENST00000531226 PHLDA1Q8WV24 401 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 204.8 ms