RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 FAM231CP0DMU5 169 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 RPL5P46777 297 aaKnown RBP4.55□□□□□ -1.68
CSDE1-213ENST00000530784 AP2S1P53680 142 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-213ENST00000530784 PIGPP57054 158 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 NUTF2P61970 127 aaKnown RBP4.55□□□□□ -1.68
CSDE1-213ENST00000530784 DHRS2Q13268 280 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 TIGITQ495A1 244 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 RNASE10Q5GAN6 216 aaKnown RBP4.55□□□□□ -1.68
CSDE1-213ENST00000530784 ZNF767PQ75MW2 155 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 ARRDC1Q8N5I2 433 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 CCDC71LQ8N9Z2 235 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 YIPF6Q96EC8 236 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
CSDE1-213ENST00000530784 MRPL36Q9P0J6 103 aaKnown RBP4.55□□□□□ -1.68
CSDE1-213ENST00000530784 HECTD4Q9Y4D8 3996 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 IGLV8-61A0A075B6I0 122 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 HPGDSO60760 199 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 TNFAIP8O95379 198 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 IGKV1-17P01599 117 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 IL4P05112 153 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 IGLC1P0CG04 106 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 SLC25A4P12235 298 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 TBPP20226 339 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 NPY1RP25929 384 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 HTR2BP41595 481 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 RND2P52198 227 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 SNRPD3P62318 126 aaKnown RBP4.54□□□□□ -1.68
CSDE1-213ENST00000530784 C12orf74Q32Q52 190 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 BSXQ3C1V8 233 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 SP6Q3SY56 376 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 LHFPL1Q86WI0 220 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 OR1S2Q8NGQ3 325 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 Q8WTZ3 238 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 COPZ2Q9P299 210 aa4.54□□□□□ -1.68
CSDE1-213ENST00000530784 A0A087WXM4 84 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 A0A0G2JRQ6 117 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 FAM25AB3EWG3 89 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 FAM25CB3EWG5 89 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 FAM25GB3EWG6 89 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 M0R2N4 97 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 GSTZ1O43708 216 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-213ENST00000530784 B3GALNT1O75752 331 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 SERF1AO75920 110 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 CD3DP04234 171 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 SPART-AS1P0CW21 52 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 OR10J1P30954 320 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 SPCS3P61009 180 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 YPEL3P61236 119 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-213ENST00000530784 NCS1P62166 190 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 USF2Q15853 346 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-213ENST00000530784 SCGB2B2Q4G0G5 96 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 PRSS54Q6PEW0 395 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 CEND1Q8N111 149 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 OR13C8Q8NGS7 320 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 OR52E5Q8NH55 327 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 ZFAND1Q8TCF1 268 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 RNASEH2CQ8TDP1 164 aaKnown RBP4.53□□□□□ -1.68
CSDE1-213ENST00000530784 SCRT1Q9BWW7 348 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 BATF3Q9NR55 127 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-213ENST00000530784 XCL2Q9UBD3 114 aa4.53□□□□□ -1.68
CSDE1-213ENST00000530784 KMT2AQ03164 3969 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 TMEM189A5PLL7 270 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 CEBPZOSA8MTT3 80 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 H3BMM0 161 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 IFNA10P01566 189 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 IFNA21P01568 189 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 OR5AC1P0C628 307 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 HLA-DRB4P13762 266 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 NUP62P37198 522 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-213ENST00000530784 RORCP51449 518 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 EMP1P54849 157 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 TAS2R19P59542 299 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 VBP1P61758 197 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 LGALS9BQ3B8N2 356 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 ZNF705AQ6ZN79 300 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-213ENST00000530784 UBE2DNLQ8IWF7 75 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 TERB2Q8NHR7 220 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 MARCH1Q8TCQ1 289 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 C15orf40Q8WUR7 153 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 AP3S1Q92572 193 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 RBPMSQ93062 196 aaKnown RBP4.52□□□□□ -1.69
CSDE1-213ENST00000530784 ACY3Q96HD9 319 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 TMEM222Q9H0R3 208 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 EXTL2Q9UBQ6 330 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 MTFP1Q9UDX5 166 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 C14orf166Q9Y224 244 aaKnown RBP4.52□□□□□ -1.69
CSDE1-213ENST00000530784 HLA-DRB4X5D2U9 266 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 DNAH10Q8IVF4 4471 aa4.52□□□□□ -1.69
CSDE1-213ENST00000530784 VPS13DQ5THJ4 4388 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 SMIM9A6NGZ8 99 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 ZNF705FA8MVS1 300 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-213ENST00000530784 CDS2O95674 445 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 RAB3DO95716 219 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 CD74P04233 296 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 ZNF705DP0CH99 300 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-213ENST00000530784 ZNF705BP0CI00 300 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-213ENST00000530784 RD3LP0DJH9 198 aa4.51□□□□□ -1.69
CSDE1-213ENST00000530784 RPL32P62910 135 aaKnown RBP4.51□□□□□ -1.69
CSDE1-213ENST00000530784 SURF2Q15527 256 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms