RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 GRIFINA4D1Z8 144 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 C5orf49A4QMS7 147 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 KIR3DP1A8MWS1 328 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 F2Z2F3 143 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 FNDC10F2Z333 226 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 M0R1B8 84 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 CCL25O15444 150 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 TCF21O43680 179 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 MRPL33O75394 65 aaKnown RBP2.98□□□□□ -1.93
USP47-209ENST00000530041 KLF7O75840 302 aaPredicted RBP2.98□□□□□ -1.93
USP47-209ENST00000530041 S1PR2O95136 353 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 OR2H2O95918 312 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 ORM1P02763 201 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 OR5G3P0C626 314 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 ARL14EPLP0DKL9 152 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 CBLN1P23435 193 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 G6PCP35575 357 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 RHOBP62745 196 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 RPL19P84098 196 aaKnown RBP2.98□□□□□ -1.93
USP47-209ENST00000530041 ZNF90Q03938 601 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 EGFEM1PQ0D2K5 195 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 MORN2Q502X0 79 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 SPATA45Q537H7 98 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 GUSBP11Q6P575 273 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 LINC00173Q6ZV60 143 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 WDR86Q86TI4 376 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 LRP11Q86VZ4 500 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 NIT1Q86X76 327 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 BAGE3Q86Y29 109 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 BAGE2Q86Y30 109 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 TMEM61Q8N0U2 210 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 C14orf178Q8N769 122 aaPredicted RBP2.98□□□□□ -1.93
USP47-209ENST00000530041 SIGLECL1Q8N7X8 197 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 OR2M7Q8NG81 312 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 OR4P4Q8NGL7 312 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 CDX2Q99626 313 aaPredicted RBP2.98□□□□□ -1.93
USP47-209ENST00000530041 HSD17B10Q99714 261 aaKnown RBP2.98□□□□□ -1.93
USP47-209ENST00000530041 MGST2Q99735 147 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 RTL8AQ9BWD3 113 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 GGTLC1Q9BX51 225 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 MRPL27Q9P0M9 148 aaKnown RBP2.98□□□□□ -1.93
USP47-209ENST00000530041 TRAPPC2LQ9UL33 140 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 LAMTOR2Q9Y2Q5 125 aa2.98□□□□□ -1.93
USP47-209ENST00000530041 RBM7Q9Y580 266 aaKnown RBP2.98□□□□□ -1.93
USP47-209ENST00000530041 YTHDF2Q9Y5A9 579 aaKnown RBP2.98□□□□□ -1.93
USP47-209ENST00000530041 SPAG17Q6Q759 2223 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 TRAV38-1A0A0B4J264 116 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 SMIM27A0A1W2PRY6 76 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 IGLC7A0M8Q6 106 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 PANO1I0J062 215 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 J3QLI3 93 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 SLC17A3O00476 420 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 ISLRO14498 428 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 CRXO43186 299 aaPredicted RBP2.97□□□□□ -1.93
USP47-209ENST00000530041 ZNF324O75467 553 aaPredicted RBP2.97□□□□□ -1.93
USP47-209ENST00000530041 MT-CO2P00403 227 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 IGLV1-47P01700 117 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 IGLV2-8P01709 118 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 HLA-DQA1P01909 254 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 HBZP02008 142 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 PPBPP02775 128 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 LINC00869P0C866 280 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 C3orf79P0CE67 100 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 DEFA4P12838 97 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 TSPOP30536 169 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 MYCNOSP40205 109 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 ZNF83P51522 516 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 EDDM3BP56851 147 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 CACNG7P62955 275 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 ARG2P78540 354 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 RHOGP84095 191 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 PLGLB1Q02325 96 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 CD164Q04900 197 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 REG3AQ06141 175 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 ZNF816Q0VGE8 651 aaPredicted RBP2.97□□□□□ -1.93
USP47-209ENST00000530041 GTF3C1Q12789 2109 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 MMDQ15546 238 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 PMCHL1Q16048 86 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 RASL11AQ6T310 242 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 TMEM251Q8N6I4 163 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 ST6GALNAC3Q8NDV1 305 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 ABHD3Q8WU67 409 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 C22orf15Q8WYQ4 148 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 GALMQ96C23 342 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 STARD4Q96DR4 205 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 C16orf74Q96GX8 76 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 KCNS1Q96KK3 526 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 C19orf24Q9BVV8 132 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 SAMD10Q9BYL1 202 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 COMMD5Q9GZQ3 224 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 DEFB127Q9H1M4 99 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 OR2D2Q9H210 308 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 BET1LQ9NYM9 111 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 TBL2Q9Y4P3 447 aaKnown RBP2.97□□□□□ -1.93
USP47-209ENST00000530041 HTTP42858 3142 aa2.97□□□□□ -1.93
USP47-209ENST00000530041 KIAA0100Q14667 2235 aaKnown RBP2.96□□□□□ -1.94
USP47-209ENST00000530041 RAI1Q7Z5J4 1906 aaPredicted RBP2.96□□□□□ -1.94
USP47-209ENST00000530041 TRAV30A0A087WSZ9 112 aa2.96□□□□□ -1.94
USP47-209ENST00000530041 IGHV1-69-2A0A0G2JMI3 117 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms