RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 MRPL51Q4U2R6 128 aaKnown RBP6.17□□□□□ -1.42
CTNND1-223ENST00000529986 C2orf66Q6UXQ4 117 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 CEND1Q8N111 149 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 LY6G5BQ8NDX9 201 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 ZC2HC1AQ96GY0 325 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 PRADC1Q9BSG0 188 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 C1QTNF4Q9BXJ3 329 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 MRPL35Q9NZE8 188 aaKnown RBP6.17□□□□□ -1.42
CTNND1-223ENST00000529986 DKK2Q9UBU2 259 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.17□□□□□ -1.42
CTNND1-223ENST00000529986 TRACP01848 142 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 CLPSP04118 112 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 HLA-DRB4P13762 266 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 FHL1Q13642 323 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 TDRG1Q3Y452 100 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 SH2D6Q7Z4S9 175 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 HLA-DRB4X5D2U9 266 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 DOCK6Q96HP0 2047 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 PTPRDP23468 1912 aa6.17□□□□□ -1.42
CTNND1-223ENST00000529986 IGKV1D-17A0A075B6S4 117 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 IGLC7A0M8Q6 106 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 DKK1O94907 266 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 CFHR1Q03591 330 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 SPACA3Q8IXA5 215 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 TMEM190Q8WZ59 177 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 UBE2E2Q96LR5 201 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 SIGLEC8Q9NYZ4 499 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 A0A087WX48 190 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 IL18BPO95998 194 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 EFNA4P52798 201 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 HAMPP81172 84 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 GAGE12JA6NER3 117 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 K7EMI3 77 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 SOCS3O14543 225 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 GAGE7O76087 117 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 GAGE12FP0CL80 117 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 GAGE12GP0CL81 117 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 GAGE12IP0CL82 117 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 RPL36AP83881 106 aaKnown RBP6.16□□□□□ -1.42
CTNND1-223ENST00000529986 GAGE4Q13068 117 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 BOD1L2Q8IYS8 172 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 C15orf53Q8NAA6 179 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 NTN5Q8WTR8 489 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-223ENST00000529986 RPL36ALQ969Q0 106 aaKnown RBP6.16□□□□□ -1.42
CTNND1-223ENST00000529986 TMEM126AQ9H061 195 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 SIGLEC9Q9Y336 463 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 IL17RELQ6ZVW7 336 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 OR11H6Q8NGC7 330 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 DNAJC30Q96LL9 226 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 TRBV6-6A0A0A6YYG2 114 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 SMIM27A0A1W2PRY6 76 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 PFN2P35080 140 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 VMO1Q7Z5L0 202 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 RNASE6Q93091 150 aaKnown RBP6.16□□□□□ -1.42
CTNND1-223ENST00000529986 ARFGEF3Q5TH69 2177 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 MYLKQ15746 1914 aa6.16□□□□□ -1.42
CTNND1-223ENST00000529986 FRMPD3Q5JV73 1810 aa6.15□□□□□ -1.42
CTNND1-223ENST00000529986 TEX48A0A1B0GUV7 120 aa6.15□□□□□ -1.42
CTNND1-223ENST00000529986 NPYP01303 97 aa6.15□□□□□ -1.42
CTNND1-223ENST00000529986 CARD19Q96LW7 228 aa6.15□□□□□ -1.42
CTNND1-223ENST00000529986 ROS1P08922 2347 aa6.15□□□□□ -1.42
CTNND1-223ENST00000529986 A0A1W2PPI3 338 aa6.15□□□□□ -1.42
CTNND1-223ENST00000529986 NUPR1O60356 82 aa6.15□□□□□ -1.42
CTNND1-223ENST00000529986 IGKV1-39P01597 117 aa6.15□□□□□ -1.42
CTNND1-223ENST00000529986 IGKV1D-39P04432 117 aa6.15□□□□□ -1.42
CTNND1-223ENST00000529986 ARTNQ5T4W7 220 aa6.15□□□□□ -1.42
CTNND1-223ENST00000529986 Q8N8P6 123 aa6.15□□□□□ -1.42
CTNND1-223ENST00000529986 GAFA1Q96PS6 74 aa6.15□□□□□ -1.42
CTNND1-223ENST00000529986 TINCRA0A1B0GVN0 87 aa6.15□□□□□ -1.43
CTNND1-223ENST00000529986 CRYBA4P53673 196 aa6.15□□□□□ -1.43
CTNND1-223ENST00000529986 LGALS9BQ3B8N2 356 aa6.15□□□□□ -1.43
CTNND1-223ENST00000529986 LGALS9CQ6DKI2 356 aa6.15□□□□□ -1.43
CTNND1-223ENST00000529986 C9orf139Q6ZV77 190 aa6.15□□□□□ -1.43
CTNND1-223ENST00000529986 PCP2Q8IVA1 136 aa6.15□□□□□ -1.43
CTNND1-223ENST00000529986 LYPD1Q8N2G4 141 aa6.15□□□□□ -1.43
CTNND1-223ENST00000529986 VGLL1Q99990 258 aa6.15□□□□□ -1.43
CTNND1-223ENST00000529986 SHANK2-AS3Q9BTD1 123 aa6.15□□□□□ -1.43
CTNND1-223ENST00000529986 C12orf74Q32Q52 190 aa6.15□□□□□ -1.43
CTNND1-223ENST00000529986 ZNF492Q9P255 531 aa6.15□□□□□ -1.43
CTNND1-223ENST00000529986 ANAPC10Q9UM13 185 aa6.15□□□□□ -1.43
CTNND1-223ENST00000529986 IGHV3-16A0A0C4DH30 117 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 PRSS46E5RG02 174 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 LYPD2Q6UXB3 125 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 PRO1854Q9UHT4 67 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 K7EN84 100 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 THBDP07204 575 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 C5orf64Q2M2E5 130 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 BRD3OSQ6XYD6 125 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 RPL35AP18077 110 aaKnown RBP6.14□□□□□ -1.43
CTNND1-223ENST00000529986 OVOL2Q9BRP0 275 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 TANC1Q9C0D5 1861 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 GAGE5Q13069 117 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 GAGE6Q13070 117 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 ZNF672Q499Z4 452 aaPredicted RBP6.14□□□□□ -1.43
CTNND1-223ENST00000529986 SUMO4Q6EEV6 95 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 Q6ZS49 121 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 C3orf56Q8N813 242 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 TMEM178BH3BS89 294 aa6.14□□□□□ -1.43
CTNND1-223ENST00000529986 WISP1O95388 367 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms