RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 TRIM16LQ309B1 348 aa3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 PSMG4Q5JS54 123 aa3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 CLVS1Q8IUQ0 354 aaPredicted RBP3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 OR4X1Q8NH49 305 aa3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 RNASE11Q8TAA1 199 aaKnown RBP3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 GPX8Q8TED1 209 aa3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 DCANP1Q8TF63 244 aa3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 CLEC5AQ9NY25 188 aa3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 A0A1B0GVY2 172 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 SMCO3A2RU48 225 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 IGKV1-17P01599 117 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 IGKV1-5P01602 117 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 P0C879 139 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 CT45A10P0DMU9 189 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 PIGPP57054 158 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 PLP1P60201 277 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 C12orf74Q32Q52 190 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 ZNF506Q5JVG8 444 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 GPR107Q5VW38 600 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 SNX29P2Q8IUI4 249 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 CCDC71LQ8N9Z2 235 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 CSNK1G2-AS1Q8NCQ2 148 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 OR1S2Q8NGQ3 325 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 Q8WTZ3 238 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 COPZ2Q9P299 210 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 CELA1Q9UNI1 258 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 AGRNO00468 2067 aa3.56□□□□□ -1.84
AMBRA1-209ENST00000529963 C3orf85A0A1B0GTC6 90 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 TMEM189A5PLL7 270 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 E9PLD3 99 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 M0R2N4 97 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 RTL8CO15255 209 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 GSTZ1O43708 216 aaPredicted RBP3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 IFNA10P01566 189 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 IFNA21P01568 189 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 APOA1P02647 267 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 STAG3L3P0CL85 134 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 SPART-AS1P0CW21 52 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 SLC25A4P12235 298 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 OR10J1P30954 320 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 TGFBR1P36897 503 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 NUP62P37198 522 aaPredicted RBP3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 ETV6P41212 452 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 HTR2BP41595 481 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 HNRNPA3P51991 378 aaKnown RBP3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 SPCS3P61009 180 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 LGALS9BQ3B8N2 356 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 RNASE10Q5GAN6 216 aaKnown RBP3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 SOHLH1Q5JUK2 328 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 ZNF767PQ75MW2 155 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 UBE2DNLQ8IWF7 75 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 ARRDC1Q8N5I2 433 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 ZFAND1Q8TCF1 268 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 FAM210BQ96KR6 192 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 TP53RKQ96S44 253 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 NAA50Q9GZZ1 169 aaKnown RBP3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 MRPL36Q9P0J6 103 aaKnown RBP3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 XCL2Q9UBD3 114 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 COMMD3Q9UBI1 195 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 CSDC2Q9Y534 153 aaKnown RBP3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 HSPG2P98160 4391 aa3.55□□□□□ -1.84
AMBRA1-209ENST00000529963 SMIM9A6NGZ8 99 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 H3BMM0 161 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 IL4P05112 153 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 IGLC1P0CG04 106 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 HLA-DRB4P13762 266 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 TBPP20226 339 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 RND2P52198 227 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 KRTAP10-5P60370 271 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 YPEL3P61236 119 aaPredicted RBP3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 VBP1P61758 197 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 BSXQ3C1V8 233 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 PRSS54Q6PEW0 395 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 LHFPL1Q86WI0 220 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 OR52E5Q8NH55 327 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 RNASEH2CQ8TDP1 164 aaKnown RBP3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 YIPF6Q96EC8 236 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 CHTOPQ9Y3Y2 248 aaKnown RBP3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 RFNGQ9Y644 331 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 HLA-DRB4X5D2U9 266 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 IGLV2-18A0A075B6J9 118 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 A0A0G2JRQ6 117 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 CEBPZOSA8MTT3 80 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 ZNF705FA8MVS1 300 aaPredicted RBP3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 FAM25EA8MYX2 175 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 FAM25AB3EWG3 89 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 FAM25CB3EWG5 89 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 FAM25GB3EWG6 89 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 CD74P04233 296 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 CD3DP04234 171 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 ZNF705DP0CH99 300 aaPredicted RBP3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 ZNF705BP0CI00 300 aaPredicted RBP3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 RD3LP0DJH9 198 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 LEPP41159 167 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 EMP1P54849 157 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 NCS1P62166 190 aa3.54□□□□□ -1.84
AMBRA1-209ENST00000529963 USF2Q15853 346 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms