RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 OR2G3Q8NGZ4 309 aa11.61□□□□□ -0.55
TSPAN4-218ENST00000529566 BLNKQ8WV28 456 aa11.61□□□□□ -0.55
TSPAN4-218ENST00000529566 RNF141Q8WVD5 230 aa11.61□□□□□ -0.55
TSPAN4-218ENST00000529566 DNAH1Q9P2D7 4330 aa11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 SMIM9A6NGZ8 99 aa11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 BOLA2-SMG1P6H3BVE0 249 aa11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 M0R3E3 92 aa11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 EIF3GO75821 320 aaKnown RBP eCLIP11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 AMBPP02760 352 aa11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 OR10J4P0C629 311 aa11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 ATP6V0CP27449 155 aa11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 RAB2AP61019 212 aa11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 ACOT6Q3I5F7 207 aaPredicted RBP11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 EXOC3-AS1Q8N2X6 119 aa11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 HSD17B11Q8NBQ5 300 aa11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 C11orf45Q8TAV5 145 aa11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 PSMG3Q9BT73 122 aaPredicted RBP11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 RYR2Q92736 4967 aa11.6□□□□□ -0.55
TSPAN4-218ENST00000529566 NPIPB6E9PJ23 425 aa11.59□□□□□ -0.55
TSPAN4-218ENST00000529566 PMS2P11Q13670 270 aa11.59□□□□□ -0.55
TSPAN4-218ENST00000529566 RPL7L1Q6DKI1 246 aaKnown RBP11.59□□□□□ -0.55
TSPAN4-218ENST00000529566 BAP18Q8IXM2 172 aa11.59□□□□□ -0.55
TSPAN4-218ENST00000529566 PRELID1Q9Y255 219 aa11.59□□□□□ -0.55
TSPAN4-218ENST00000529566 GOLT1BQ9Y3E0 138 aa11.59□□□□□ -0.55
TSPAN4-218ENST00000529566 TRAV12-2A0A075B6T6 113 aa11.58□□□□□ -0.56
TSPAN4-218ENST00000529566 IGHV3OR16-12A0A075B7B8 117 aa11.58□□□□□ -0.56
TSPAN4-218ENST00000529566 CXorf65A6NEN9 183 aa11.58□□□□□ -0.56
TSPAN4-218ENST00000529566 OR7C2O60412 319 aa11.58□□□□□ -0.56
TSPAN4-218ENST00000529566 CT45A10P0DMU9 189 aa11.58□□□□□ -0.56
TSPAN4-218ENST00000529566 CEMP1Q6PRD7 247 aaPredicted RBP11.58□□□□□ -0.56
TSPAN4-218ENST00000529566 RPP25LQ8N5L8 163 aaKnown RBP11.58□□□□□ -0.56
TSPAN4-218ENST00000529566 OR10J6PQ8NGY7 276 aa11.58□□□□□ -0.56
TSPAN4-218ENST00000529566 PHYHIPLQ96FC7 376 aa11.58□□□□□ -0.56
TSPAN4-218ENST00000529566 SH3BGRL3Q9H299 93 aa11.58□□□□□ -0.56
TSPAN4-218ENST00000529566 CYTL1Q9NRR1 136 aa11.58□□□□□ -0.56
TSPAN4-218ENST00000529566 CELA1Q9UNI1 258 aa11.58□□□□□ -0.56
TSPAN4-218ENST00000529566 ARPC5O15511 151 aa11.57□□□□□ -0.56
TSPAN4-218ENST00000529566 INSP01308 110 aa11.57□□□□□ -0.56
TSPAN4-218ENST00000529566 TAS2R45P59539 299 aa11.57□□□□□ -0.56
TSPAN4-218ENST00000529566 SERF2P84101 59 aa11.57□□□□□ -0.56
TSPAN4-218ENST00000529566 ICAM4Q14773 271 aa11.57□□□□□ -0.56
TSPAN4-218ENST00000529566 KIR3DS1Q14943 382 aa11.57□□□□□ -0.56
TSPAN4-218ENST00000529566 KHDC3LQ587J8 217 aa11.57□□□□□ -0.56
TSPAN4-218ENST00000529566 OR11H4Q8NGC9 324 aa11.57□□□□□ -0.56
TSPAN4-218ENST00000529566 OR10G4Q8NGN3 311 aa11.57□□□□□ -0.56
TSPAN4-218ENST00000529566 OR10G9Q8NGN4 311 aa11.57□□□□□ -0.56
TSPAN4-218ENST00000529566 OR10G7Q8NGN6 311 aa11.57□□□□□ -0.56
TSPAN4-218ENST00000529566 PHLDA1Q8WV24 401 aaPredicted RBP11.57□□□□□ -0.56
TSPAN4-218ENST00000529566 ALMS1Q8TCU4 4167 aa11.56□□□□□ -0.56
TSPAN4-218ENST00000529566 NUPR2A6NF83 97 aa11.56□□□□□ -0.56
TSPAN4-218ENST00000529566 PRM2P04554 102 aa11.56□□□□□ -0.56
TSPAN4-218ENST00000529566 CDKN1BP46527 198 aa11.56□□□□□ -0.56
TSPAN4-218ENST00000529566 FAM122CQ6P4D5 195 aa11.56□□□□□ -0.56
TSPAN4-218ENST00000529566 ODF3Q96PU9 254 aa11.56□□□□□ -0.56
TSPAN4-218ENST00000529566 AGPAT4-IT1Q9H0P7 198 aa11.56□□□□□ -0.56
TSPAN4-218ENST00000529566 AAMDCQ9H7C9 122 aa11.56□□□□□ -0.56
TSPAN4-218ENST00000529566 BORCS7-ASMTA0A0B4J1R7 106 aa11.55□□□□□ -0.56
TSPAN4-218ENST00000529566 A0A1W2PPV4 95 aa11.55□□□□□ -0.56
TSPAN4-218ENST00000529566 RANP62826 216 aaKnown RBP11.55□□□□□ -0.56
TSPAN4-218ENST00000529566 UBE2L3P68036 154 aaKnown RBP11.55□□□□□ -0.56
TSPAN4-218ENST00000529566 ERCC8Q13216 396 aa11.55□□□□□ -0.56
TSPAN4-218ENST00000529566 Q6ZNX1 250 aa11.55□□□□□ -0.56
TSPAN4-218ENST00000529566 LYPD1Q8N2G4 141 aa11.55□□□□□ -0.56
TSPAN4-218ENST00000529566 FAM19A4Q96LR4 140 aa11.55□□□□□ -0.56
TSPAN4-218ENST00000529566 PPP1R14DQ9NXH3 145 aa11.55□□□□□ -0.56
TSPAN4-218ENST00000529566 HYDINQ4G0P3 5121 aa11.55□□□□□ -0.56
TSPAN4-218ENST00000529566 LCE6AA0A183 80 aa11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 TMEM189A5PLL7 270 aa11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 HMSDA8MTL9 139 aa11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 TAAR5O14804 337 aa11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 HMGB3O15347 200 aaKnown RBP11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 HBE1P02100 147 aa11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 C12orf74Q32Q52 190 aa11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 PQLC2Q6ZP29 291 aa11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 C9orf47Q6ZRZ4 202 aa11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 RAB24Q969Q5 203 aa11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 GNPNAT1Q96EK6 184 aaPredicted RBP11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 LINC00477Q96M19 166 aa11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 VGLL1Q99990 258 aa11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 Q9H3A6 140 aa11.54□□□□□ -0.56
TSPAN4-218ENST00000529566 IGKV2-40A0A087WW87 121 aaPredicted RBP11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 LOC102723971A0A1B0GUV8 181 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 ZNF705GA8MUZ8 300 aaPredicted RBP11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 JTBO76095 146 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 IGKV2D-40P01614 121 aaPredicted RBP11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 MBP02144 154 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 STAG3L2P0CL84 134 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 STAG3L3P0CL85 134 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 AZU1P20160 251 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 TSPOP30536 169 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 CDC34P49427 236 aaPredicted RBP11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 ZNF345Q14585 488 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 RRN3P1Q2M238 152 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 GFI1BQ5VTD9 330 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 TMEM256Q8N2U0 113 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 KCNRGQ8N5I3 272 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 SUN5Q8TC36 379 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 ST6GAL2Q96JF0 529 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 TMEM208Q9BTX3 173 aa11.53□□□□□ -0.56
TSPAN4-218ENST00000529566 PLAC8L1A1L4L8 177 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms