RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 ZNF345Q14585 488 aa8.73□□□□□ -1.01
USH1C-208ENST00000529563 AKR1C8PQ5T2L2 129 aa8.73□□□□□ -1.01
USH1C-208ENST00000529563 RPL7L1Q6DKI1 246 aaKnown RBP8.73□□□□□ -1.01
USH1C-208ENST00000529563 ZNF738Q8NE65 137 aa8.73□□□□□ -1.01
USH1C-208ENST00000529563 OR10G4Q8NGN3 311 aa8.73□□□□□ -1.01
USH1C-208ENST00000529563 OR10G9Q8NGN4 311 aa8.73□□□□□ -1.01
USH1C-208ENST00000529563 OR10G7Q8NGN6 311 aa8.73□□□□□ -1.01
USH1C-208ENST00000529563 SLC50A1Q9BRV3 221 aa8.73□□□□□ -1.01
USH1C-208ENST00000529563 ZNF471Q9BX82 626 aaPredicted RBP8.73□□□□□ -1.01
USH1C-208ENST00000529563 AAMDCQ9H7C9 122 aa8.73□□□□□ -1.01
USH1C-208ENST00000529563 FUT9Q9Y231 359 aa8.73□□□□□ -1.01
USH1C-208ENST00000529563 RFNGQ9Y644 331 aa8.73□□□□□ -1.01
USH1C-208ENST00000529563 HERC2O95714 4834 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 TRAV5A0A0B4J249 113 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 SMIM9A6NGZ8 99 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 CXCL2P19875 107 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 ATP6V0CP27449 155 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 SERF2P84101 59 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 ZFP69Q49AA0 526 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 KHDC3LQ587J8 217 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 GCSAMLQ5JQS6 135 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 SOHLH1Q5JUK2 328 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 FAM122CQ6P4D5 195 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 TCTE3Q8IZS6 198 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 KCNRGQ8N5I3 272 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 OR2G3Q8NGZ4 309 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 BLNKQ8WV28 456 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 PSMG3Q9BT73 122 aaPredicted RBP8.72□□□□□ -1.01
USH1C-208ENST00000529563 PAXXQ9BUH6 204 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 OR51M1Q9H341 326 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 GOLT1BQ9Y3E0 138 aa8.72□□□□□ -1.01
USH1C-208ENST00000529563 IGLV2-18A0A075B6J9 118 aa8.71□□□□□ -1.02
USH1C-208ENST00000529563 SNRPCP09234 159 aaKnown RBP8.71□□□□□ -1.02
USH1C-208ENST00000529563 PSG9Q00887 426 aa8.71□□□□□ -1.02
USH1C-208ENST00000529563 SPATA31B1PQ5VZV4 182 aa8.71□□□□□ -1.02
USH1C-208ENST00000529563 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.71□□□□□ -1.02
USH1C-208ENST00000529563 FOXI2Q6ZQN5 318 aa8.71□□□□□ -1.02
USH1C-208ENST00000529563 MIR17HGQ75NE6 70 aa8.71□□□□□ -1.02
USH1C-208ENST00000529563 IQCF2Q8IXL9 164 aa8.71□□□□□ -1.02
USH1C-208ENST00000529563 ST6GAL2Q96JF0 529 aa8.71□□□□□ -1.02
USH1C-208ENST00000529563 HYLS1Q96M11 299 aa8.71□□□□□ -1.02
USH1C-208ENST00000529563 NEU1Q99519 415 aa8.71□□□□□ -1.02
USH1C-208ENST00000529563 NIPSNAP3BQ9BS92 247 aa8.71□□□□□ -1.02
USH1C-208ENST00000529563 TMEM208Q9BTX3 173 aa8.71□□□□□ -1.02
USH1C-208ENST00000529563 ACTR3CQ9C0K3 210 aaPredicted RBP8.71□□□□□ -1.02
USH1C-208ENST00000529563 A0A087X0K7 114 aa8.7□□□□□ -1.02
USH1C-208ENST00000529563 H3BTX0 84 aa8.7□□□□□ -1.02
USH1C-208ENST00000529563 BCL2L11O43521 198 aa8.7□□□□□ -1.02
USH1C-208ENST00000529563 DUSP14O95147 198 aaKnown RBP8.7□□□□□ -1.02
USH1C-208ENST00000529563 HBE1P02100 147 aa8.7□□□□□ -1.02
USH1C-208ENST00000529563 C1QBP02746 253 aa8.7□□□□□ -1.02
USH1C-208ENST00000529563 HIST1H1EP10412 219 aaKnown RBP8.7□□□□□ -1.02
USH1C-208ENST00000529563 CDC34P49427 236 aaPredicted RBP8.7□□□□□ -1.02
USH1C-208ENST00000529563 UBE2L3P68036 154 aaKnown RBP8.7□□□□□ -1.02
USH1C-208ENST00000529563 GDF5OSQ5U4N7 250 aa8.7□□□□□ -1.02
USH1C-208ENST00000529563 FAM222AQ5U5X8 452 aa8.7□□□□□ -1.02
USH1C-208ENST00000529563 EIF5AL1Q6IS14 154 aaKnown RBP8.7□□□□□ -1.02
USH1C-208ENST00000529563 TMUB2Q71RG4 321 aa8.7□□□□□ -1.02
USH1C-208ENST00000529563 SAV1Q9H4B6 383 aaPredicted RBP8.7□□□□□ -1.02
USH1C-208ENST00000529563 TMEM14CQ9P0S9 112 aa8.7□□□□□ -1.02
USH1C-208ENST00000529563 OR10J4P0C629 311 aa8.69□□□□□ -1.02
USH1C-208ENST00000529563 MED14OSP0DP75 135 aa8.69□□□□□ -1.02
USH1C-208ENST00000529563 TPT1P13693 172 aaKnown RBP8.69□□□□□ -1.02
USH1C-208ENST00000529563 CSN1S1P47710 185 aa8.69□□□□□ -1.02
USH1C-208ENST00000529563 DEFB1P60022 68 aa8.69□□□□□ -1.02
USH1C-208ENST00000529563 RAB2AP61019 212 aa8.69□□□□□ -1.02
USH1C-208ENST00000529563 FAM74A1Q5RGS3 127 aa8.69□□□□□ -1.02
USH1C-208ENST00000529563 MORN5Q5VZ52 161 aa8.69□□□□□ -1.02
USH1C-208ENST00000529563 IGFL4Q6B9Z1 124 aa8.69□□□□□ -1.02
USH1C-208ENST00000529563 ZNF705AQ6ZN79 300 aaPredicted RBP8.69□□□□□ -1.02
USH1C-208ENST00000529563 RNF182Q8N6D2 247 aa8.69□□□□□ -1.02
USH1C-208ENST00000529563 OR11H4Q8NGC9 324 aa8.69□□□□□ -1.02
USH1C-208ENST00000529563 OR10J6PQ8NGY7 276 aa8.69□□□□□ -1.02
USH1C-208ENST00000529563 RNF141Q8WVD5 230 aa8.69□□□□□ -1.02
USH1C-208ENST00000529563 FAM210BQ96KR6 192 aa8.69□□□□□ -1.02
USH1C-208ENST00000529563 LOC102723971A0A1B0GUV8 181 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 ZNF705FA8MVS1 300 aaPredicted RBP8.68□□□□□ -1.02
USH1C-208ENST00000529563 G3V3Q6 166 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 NBEAP1P0C6P0 100 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 ZNF705DP0CH99 300 aaPredicted RBP8.68□□□□□ -1.02
USH1C-208ENST00000529563 ZNF705BP0CI00 300 aaPredicted RBP8.68□□□□□ -1.02
USH1C-208ENST00000529563 PYYP10082 97 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 DAD1P61803 113 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 PSG3Q16557 428 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 RRN3P1Q2M238 152 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 LGALS9BQ3B8N2 356 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 PQLC2Q6ZP29 291 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 ATG101Q9BSB4 218 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 SLC25A2Q9BXI2 301 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 SLC35B3Q9H1N7 401 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 SH3BGRL3Q9H299 93 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 DKK2Q9UBU2 259 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 PRELID1Q9Y255 219 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 VPS13DQ5THJ4 4388 aa8.68□□□□□ -1.02
USH1C-208ENST00000529563 TRBV19A0A075B6N1 114 aa8.67□□□□□ -1.02
USH1C-208ENST00000529563 RTL8CO15255 209 aa8.67□□□□□ -1.02
USH1C-208ENST00000529563 HMGB3O15347 200 aaKnown RBP8.67□□□□□ -1.02
USH1C-208ENST00000529563 HIST1H1AQ02539 215 aaPredicted RBP8.67□□□□□ -1.02
USH1C-208ENST00000529563 PDE6HQ13956 83 aa8.67□□□□□ -1.02
USH1C-208ENST00000529563 STOML3Q8TAV4 291 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms