RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	C5orf56	Q8N8D9	126 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	ZNF738	Q8NE65	137 aa		11.43	□□□□□ -0.58
NR1H3-231	ENST00000529540	TLN2	Q9Y4G6	2542 aa		11.42	□□□□□ -0.58
NR1H3-231	ENST00000529540	SUB1	P53999	127 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
NR1H3-231	ENST00000529540	HILS1	P60008	231 aa		11.42	□□□□□ -0.58
NR1H3-231	ENST00000529540	SSBP2	P81877	361 aa	Predicted RBP	11.42	□□□□□ -0.58
NR1H3-231	ENST00000529540	UBE2V1	Q13404	147 aa		11.42	□□□□□ -0.58
NR1H3-231	ENST00000529540	RNASEK	Q6P5S7	137 aa	Known RBP	11.42	□□□□□ -0.58
NR1H3-231	ENST00000529540	ZNF562	Q6V9R5	426 aa		11.42	□□□□□ -0.58
NR1H3-231	ENST00000529540	TMEM219	Q86XT9	240 aa		11.42	□□□□□ -0.58
NR1H3-231	ENST00000529540	OR4F17	Q8NGA8	305 aa		11.42	□□□□□ -0.58
NR1H3-231	ENST00000529540	CHCHD1	Q96BP2	118 aa	Known RBP	11.42	□□□□□ -0.58
NR1H3-231	ENST00000529540	NPFFR1	Q9GZQ6	430 aa		11.42	□□□□□ -0.58
NR1H3-231	ENST00000529540	EPDR1	Q9UM22	224 aa		11.42	□□□□□ -0.58
NR1H3-231	ENST00000529540	SVEP1	Q4LDE5	3571 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	HIGD1C	A8MV81	97 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540		K7EP13	123 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	CCL25	O15444	150 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	CRX	O43186	299 aa	Predicted RBP	11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	IGLL1	P15814	213 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	HBB	P68871	147 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	MAJIN	Q3KP22	176 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	LEMD1	Q68G75	181 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	PVRIG	Q6DKI7	326 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	ATOH7	Q8N100	152 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	URB1-AS1	Q96HZ7	61 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	SRSF8	Q9BRL6	282 aa	Known RBP	11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	TMEM70	Q9BUB7	260 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	MLST8	Q9BVC4	326 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	PRSS22	Q9GZN4	317 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	RPP21	Q9H633	154 aa	Known RBP	11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	ST20	Q9HBF5	79 aa		11.41	□□□□□ -0.58
NR1H3-231	ENST00000529540	HIVEP1	P15822	2718 aa		11.4	□□□□□ -0.58
NR1H3-231	ENST00000529540	TRAV34	A0A0B4J273	112 aa		11.4	□□□□□ -0.58
NR1H3-231	ENST00000529540	CGB1	A6NKQ9	187 aa		11.4	□□□□□ -0.58
NR1H3-231	ENST00000529540	CNIH1	O95406	144 aa		11.4	□□□□□ -0.58
NR1H3-231	ENST00000529540	HINT1	P49773	126 aa	Predicted RBP	11.4	□□□□□ -0.58
NR1H3-231	ENST00000529540	PTTG1IP	P53801	180 aa		11.4	□□□□□ -0.58
NR1H3-231	ENST00000529540		Q56UQ5	140 aa		11.4	□□□□□ -0.58
NR1H3-231	ENST00000529540	GFRA4	Q9GZZ7	299 aa		11.4	□□□□□ -0.58
NR1H3-231	ENST00000529540	DNAJC9-AS1	A6NH13	148 aa		11.4	□□□□□ -0.59
NR1H3-231	ENST00000529540	CORT	O00230	105 aa		11.4	□□□□□ -0.59
NR1H3-231	ENST00000529540	RPL27A	P46776	148 aa	Known RBP	11.4	□□□□□ -0.59
NR1H3-231	ENST00000529540	UNQ5815/PRO19632	Q6UWF5	114 aa		11.4	□□□□□ -0.59
NR1H3-231	ENST00000529540	NPIPB3	Q92617	1050 aa		11.4	□□□□□ -0.59
NR1H3-231	ENST00000529540	GPR82	Q96P67	336 aa		11.4	□□□□□ -0.59
NR1H3-231	ENST00000529540	TPSG1	Q9NRR2	321 aa		11.4	□□□□□ -0.59
NR1H3-231	ENST00000529540	C19orf71	A6NCJ1	209 aa		11.39	□□□□□ -0.59
NR1H3-231	ENST00000529540	FAM231B	A6NCW3	169 aa		11.39	□□□□□ -0.59
NR1H3-231	ENST00000529540		A8MWL6	223 aa		11.39	□□□□□ -0.59
NR1H3-231	ENST00000529540	CRYGC	P07315	174 aa		11.39	□□□□□ -0.59
NR1H3-231	ENST00000529540	WT1-AS	Q06250	92 aa		11.39	□□□□□ -0.59
NR1H3-231	ENST00000529540	SPATA12	Q7Z6I5	190 aa		11.39	□□□□□ -0.59
NR1H3-231	ENST00000529540	TMEM190	Q8WZ59	177 aa		11.39	□□□□□ -0.59
NR1H3-231	ENST00000529540	ARPC1A	Q92747	370 aa		11.39	□□□□□ -0.59
NR1H3-231	ENST00000529540	FMC1	Q96HJ9	113 aa		11.39	□□□□□ -0.59
NR1H3-231	ENST00000529540	SLC25A5	P05141	298 aa	Known RBP	11.38	□□□□□ -0.59
NR1H3-231	ENST00000529540	RNASE1	P07998	156 aa	Known RBP	11.38	□□□□□ -0.59
NR1H3-231	ENST00000529540	GNG5	P63218	68 aa		11.38	□□□□□ -0.59
NR1H3-231	ENST00000529540	FBLN7	Q53RD9	439 aa		11.38	□□□□□ -0.59
NR1H3-231	ENST00000529540	ETFRF1	Q6IPR1	90 aa		11.38	□□□□□ -0.59
NR1H3-231	ENST00000529540	PRR27	Q6MZM9	219 aa		11.38	□□□□□ -0.59
NR1H3-231	ENST00000529540	SRSF12	Q8WXF0	261 aa	Known RBP	11.38	□□□□□ -0.59
NR1H3-231	ENST00000529540	TRGV9	Q99603	122 aa		11.38	□□□□□ -0.59
NR1H3-231	ENST00000529540	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.38	□□□□□ -0.59
NR1H3-231	ENST00000529540	ZNF580	Q9UK33	172 aa		11.38	□□□□□ -0.59
NR1H3-231	ENST00000529540	F8	P00451	2351 aa		11.37	□□□□□ -0.59
NR1H3-231	ENST00000529540		E7EUB6	86 aa		11.37	□□□□□ -0.59
NR1H3-231	ENST00000529540	LTA	P01374	205 aa		11.37	□□□□□ -0.59
NR1H3-231	ENST00000529540	OR5AL1	P0C617	328 aa		11.37	□□□□□ -0.59
NR1H3-231	ENST00000529540	CAMP	P49913	170 aa		11.37	□□□□□ -0.59
NR1H3-231	ENST00000529540	RPS20	P60866	119 aa	Known RBP	11.37	□□□□□ -0.59
NR1H3-231	ENST00000529540	LINC00305	Q7Z4B0	112 aa		11.37	□□□□□ -0.59
NR1H3-231	ENST00000529540	C5orf17	Q8NAS9	161 aa		11.37	□□□□□ -0.59
NR1H3-231	ENST00000529540	SON	P18583	2426 aa	Known RBP	11.37	□□□□□ -0.59
NR1H3-231	ENST00000529540	IGHV7-81	A0A0B4J1V7	117 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	OR4C46	A6NHA9	309 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	IGHG2	P01859	326 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	MRGPRG-AS1	Q2M3A8	158 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	CLEC5A	Q9NY25	188 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	MRPL36	Q9P0J6	103 aa	Known RBP	11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	TRBV6-1	A0A0K0K1D8	114 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	PGP	A6NDG6	321 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	NPIPB6	E9PJ23	425 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	SYS1-DBNDD2	H3BUS1	97 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	PCP4	P48539	62 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	PLP1	P60201	277 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	RBX1	P62877	108 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	ASPHD1	Q5U4P2	390 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	TCF24	Q7RTU0	167 aa		11.36	□□□□□ -0.59
NR1H3-231	ENST00000529540	TRAV30	A0A087WSZ9	112 aa		11.35	□□□□□ -0.59
NR1H3-231	ENST00000529540	IGHV1-24	A0A0C4DH33	117 aa		11.35	□□□□□ -0.59
NR1H3-231	ENST00000529540		P01737	135 aa		11.35	□□□□□ -0.59
NR1H3-231	ENST00000529540	IGF1	P05019	195 aa		11.35	□□□□□ -0.59
NR1H3-231	ENST00000529540	GP9	P14770	177 aa		11.35	□□□□□ -0.59
NR1H3-231	ENST00000529540	CRIP2	P52943	208 aa	Predicted RBP	11.35	□□□□□ -0.59
NR1H3-231	ENST00000529540	C16orf54	Q6UWD8	224 aa		11.35	□□□□□ -0.59
NR1H3-231	ENST00000529540	GTSF1	Q8WW33	167 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms