RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 LY6HO94772 140 aa6.5□□□□□ -1.37
CSTF3-208ENST00000528865 NCR2O95944 276 aa6.5□□□□□ -1.37
CSTF3-208ENST00000528865 NUDT3O95989 172 aa6.5□□□□□ -1.37
CSTF3-208ENST00000528865 FAM106CPP0CH98 169 aa6.5□□□□□ -1.37
CSTF3-208ENST00000528865 TMEM11P17152 192 aa6.5□□□□□ -1.37
CSTF3-208ENST00000528865 ZFP36P26651 326 aaKnown RBP6.5□□□□□ -1.37
CSTF3-208ENST00000528865 IFI27P40305 119 aaPredicted RBP6.5□□□□□ -1.37
CSTF3-208ENST00000528865 ZNF80P51504 273 aaPredicted RBP6.5□□□□□ -1.37
CSTF3-208ENST00000528865 FAM106AQ4KMX7 169 aa6.5□□□□□ -1.37
CSTF3-208ENST00000528865 MPV17L2Q567V2 206 aa6.5□□□□□ -1.37
CSTF3-208ENST00000528865 AMN1Q8IY45 258 aa6.5□□□□□ -1.37
CSTF3-208ENST00000528865 ZNF502Q8TBZ5 544 aa6.5□□□□□ -1.37
CSTF3-208ENST00000528865 RNF185Q96GF1 192 aa6.5□□□□□ -1.37
CSTF3-208ENST00000528865 VGLL1Q99990 258 aa6.5□□□□□ -1.37
CSTF3-208ENST00000528865 IGKV2-40A0A087WW87 121 aaPredicted RBP6.49□□□□□ -1.37
CSTF3-208ENST00000528865 A0A1W2PRD5 423 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 A0A1W2PRF3 423 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 A0A1W2PRM7 423 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 NCBP2LA6PVI3 153 aaKnown RBP6.49□□□□□ -1.37
CSTF3-208ENST00000528865 FABP5P3A8MUU1 101 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 SIVA1O15304 175 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 BUB3O43684 328 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 IGKV2D-40P01614 121 aaPredicted RBP6.49□□□□□ -1.37
CSTF3-208ENST00000528865 PPBPP02775 128 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 FGF6P10767 208 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 GPR183P32249 361 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 UCNP55089 124 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 LOXL1Q08397 574 aaPredicted RBP6.49□□□□□ -1.37
CSTF3-208ENST00000528865 LINC01559Q495D7 138 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 PSMG4Q5JS54 123 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 C2orf91Q6ZV80 131 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 Q6ZVH6 145 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 FER1L6-AS1Q8NA97 138 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 PIFOQ8TCI5 191 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 MRPL53Q96EL3 112 aaKnown RBP6.49□□□□□ -1.37
CSTF3-208ENST00000528865 ATP6V0BQ99437 205 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 ZFAND3Q9H8U3 227 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 CBY1Q9Y3M2 126 aa6.49□□□□□ -1.37
CSTF3-208ENST00000528865 APC2O95996 2303 aa6.48□□□□□ -1.37
CSTF3-208ENST00000528865 ACACAQ13085 2346 aa6.48□□□□□ -1.37
CSTF3-208ENST00000528865 COL6A3P12111 3177 aa6.48□□□□□ -1.37
CSTF3-208ENST00000528865 TMSB15BA0A087X1C1 80 aa6.48□□□□□ -1.37
CSTF3-208ENST00000528865 OR2T8A6NH00 312 aa6.48□□□□□ -1.37
CSTF3-208ENST00000528865 PRSS47A8MTI9 375 aa6.48□□□□□ -1.37
CSTF3-208ENST00000528865 HBDP02042 147 aa6.48□□□□□ -1.37
CSTF3-208ENST00000528865 UBE2E1P51965 193 aa6.48□□□□□ -1.37
CSTF3-208ENST00000528865 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.48□□□□□ -1.37
CSTF3-208ENST00000528865 BOD1L2Q8IYS8 172 aa6.48□□□□□ -1.37
CSTF3-208ENST00000528865 SLC50A1Q9BRV3 221 aa6.48□□□□□ -1.37
CSTF3-208ENST00000528865 HIF1ANQ9NWT6 349 aa6.48□□□□□ -1.37
CSTF3-208ENST00000528865 U3KQE9 123 aa6.48□□□□□ -1.37
CSTF3-208ENST00000528865 TTC28Q96AY4 2481 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 LOC389332A0A1B0GUA5 103 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 CLPSL1A2RUU4 121 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 NDUFS7O75251 213 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 GOSR1O95249 250 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 IGHV3-23P01764 117 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 HLA-DMBP28068 263 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 CKS2P33552 79 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 SEC11AP67812 179 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 TWIST1Q15672 202 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 ANKRD39Q53RE8 183 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 IFI27L1Q96BM0 104 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 MCRIP2Q9BUT9 160 aaKnown RBP6.47□□□□□ -1.37
CSTF3-208ENST00000528865 TPPP3Q9BW30 176 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 TP73-AS1Q9UF72 201 aa6.47□□□□□ -1.37
CSTF3-208ENST00000528865 MUC3AQ02505 3323 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 IGHV4-4A0A075B6R2 117 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 TRAV8-2A0A0B4J237 113 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 MUC21A0A0G2JKD1 596 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 CENPVL3A0A0U1RRI6 287 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 MUC21A0A140T8X8 626 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 PRAC2D3DTV9 90 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 NPYP01303 97 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 CLEC3BP05452 202 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 PRB4P10163 310 aaPredicted RBP6.46□□□□□ -1.38
CSTF3-208ENST00000528865 FCER1GP30273 86 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 CRIP2P52943 208 aaPredicted RBP6.46□□□□□ -1.38
CSTF3-208ENST00000528865 TMEM97Q5BJF2 176 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 MUC21Q5SSG8 566 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 OR9G4Q8NGQ1 327 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 ZMAT4Q9H898 229 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 ARHGAP32A7KAX9 2087 aa6.46□□□□□ -1.38
CSTF3-208ENST00000528865 RP1L1Q8IWN7 2480 aaPredicted RBP6.45□□□□□ -1.38
CSTF3-208ENST00000528865 FRYQ5TBA9 3013 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 TRBV7-1A0A0A6YYK4 115 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 IGKV3D-20A0A0C4DH25 116 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 A0A1W2PPR1 153 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 EFNA4P52798 201 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 LMO4P61968 165 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 ERCC8Q13216 396 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 FOXE3Q13461 319 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 VAMP3Q15836 100 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 C15orf32Q32M92 178 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 C19orf54Q5BKX5 351 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 IGFL4Q6B9Z1 124 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 C9orf47Q6ZRZ4 202 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 OR4X2Q8NGF9 303 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 OR8A1Q8NGG7 326 aa6.45□□□□□ -1.38
CSTF3-208ENST00000528865 Q8TAT8 98 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms