RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 FGF23Q9GZV9 251 aaPredicted RBP2.17□□□□□ -2.06
CD44-229ENST00000528672 DPH3P1Q9H4G8 78 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 TMEM242Q9NWH2 141 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 PRO0461Q9UI25 63 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 HHLA3Q9XRX5 114 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 LINC00588Q9Y4M8 146 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 ZNF638Q14966 1978 aaKnown RBP2.17□□□□□ -2.06
CD44-229ENST00000528672 TNRC6AQ8NDV7 1962 aaKnown RBP2.17□□□□□ -2.06
CD44-229ENST00000528672 PIKFYVEQ9Y2I7 2098 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 PDE4DIPQ5VU43 2346 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 MYH7BA7E2Y1 1941 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 DENND4CQ5VZ89 1909 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 PARP14Q460N5 1801 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 CDC42BPAQ5VT25 1732 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 TARBP1Q13395 1621 aaKnown RBP2.17□□□□□ -2.06
CD44-229ENST00000528672 ABCA6Q8N139 1617 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 BIVM-ERCC5R4GMW8 1640 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 URB2Q14146 1524 aaKnown RBP2.17□□□□□ -2.06
CD44-229ENST00000528672 ZMYM4Q5VZL5 1548 aa2.17□□□□□ -2.06
CD44-229ENST00000528672 PLXNC1O60486 1568 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 DIP2CQ9Y2E4 1556 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 PXDNLA1KZ92 1463 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 A0A096LNJ9 63 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 IGKV6D-21A0A0A0MT36 114 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 TRAV1-1A0A0B4J248 108 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 TRBV7-7A0A0K0K1E9 115 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 FAM24AA6NFZ4 105 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 A8MU10 97 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 A8MWL6 223 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 IGLL5B9A064 214 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 SYS1-DBNDD2H3BUS1 97 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 H3BUT2 72 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 BPY2O14599 106 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 TCL1BO95988 128 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 IGLV3-27P01718 113 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 GYPBP06028 91 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 COX6A1P12074 109 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 COL8A2P25067 703 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 LSM3P62310 102 aaKnown RBP2.16□□□□□ -2.06
CD44-229ENST00000528672 SNRPD3P62318 126 aaKnown RBP2.16□□□□□ -2.06
CD44-229ENST00000528672 HBBP68871 147 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 ADIGQ0VDE8 80 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 PMCHL1Q16048 86 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 ETDBQ3ZM63 59 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 EBLN2Q6P2I7 272 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 GUSBP11Q6P575 273 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 Q8N2B8 174 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 ZNF645Q8N7E2 425 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 APCDD1LQ8NCL9 501 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 C10orf105Q8TEF2 133 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 H1FXQ92522 213 aaKnown RBP2.16□□□□□ -2.06
CD44-229ENST00000528672 ABHD14BQ96IU4 210 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 PMCHL2Q9BQD1 86 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 SLC35B3Q9H1N7 401 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 SMDT1Q9H4I9 107 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 PLEKHF2Q9H8W4 249 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 SLC39A9Q9NUM3 307 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 ZNRD1Q9P1U0 126 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 DOCK6Q96HP0 2047 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 MYH6P13533 1939 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 ALPK3Q96L96 1907 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 CHD2O14647 1828 aaKnown RBP2.16□□□□□ -2.06
CD44-229ENST00000528672 LAMC1P11047 1609 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 TDRD6O60522 2096 aaKnown RBP2.16□□□□□ -2.06
CD44-229ENST00000528672 ZNF462Q96JM2 2506 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 TSPOAP1O95153 1857 aa2.16□□□□□ -2.06
CD44-229ENST00000528672 ABCA8O94911 1581 aa2.15□□□□□ -2.06
CD44-229ENST00000528672 A0A0C4DFX4 3053 aa2.15□□□□□ -2.06
CD44-229ENST00000528672 MAST4O15021 2626 aa2.15□□□□□ -2.06
CD44-229ENST00000528672 TNRC18O15417 2968 aaPredicted RBP2.15□□□□□ -2.07
CD44-229ENST00000528672 TRPM3Q9HCF6 1732 aaPredicted RBP2.15□□□□□ -2.07
CD44-229ENST00000528672 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.15□□□□□ -2.07
CD44-229ENST00000528672 BUB1B-PAK6H3BSN5 160 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 K7EM74 188 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 TMEM256-PLSCR3K7ERE1 68 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 SSSCA1O60232 199 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 OR1I1O60431 355 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 CREBL2O60519 120 aaPredicted RBP2.15□□□□□ -2.07
CD44-229ENST00000528672 SOD1P00441 154 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 IGKV1-5P01602 117 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 IGHV3-11P01762 117 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 IL5P05113 134 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 ZNF823P16415 610 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 IL3RAP26951 378 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 INPP1P49441 399 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 MRPS36P82909 103 aaKnown RBP2.15□□□□□ -2.07
CD44-229ENST00000528672 ZNF345Q14585 488 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 CDK5R1Q15078 307 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 DEFB116Q30KQ4 102 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 ZNF322Q6U7Q0 402 aaPredicted RBP2.15□□□□□ -2.07
CD44-229ENST00000528672 NTM-AS1Q6ZSK4 140 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 COMMD6Q7Z4G1 85 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 SPATA12Q7Z6I5 190 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 GPHB5Q86YW7 130 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 SBSPONQ8IVN8 264 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 TMEM256Q8N2U0 113 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 C15orf53Q8NAA6 179 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 MORN4Q8NDC4 146 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 OR5H2Q8NGV7 314 aa2.15□□□□□ -2.07
CD44-229ENST00000528672 ZNF414Q96IQ9 312 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms