RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 IGHG4P01861 327 aa11.37□□□□□ -0.59
ECHDC1-220ENST00000528402 OR4X2Q8NGF9 303 aa11.37□□□□□ -0.59
ECHDC1-220ENST00000528402 ZC2HC1AQ96GY0 325 aa11.37□□□□□ -0.59
ECHDC1-220ENST00000528402 NOL4LQ96MY1 436 aaPredicted RBP11.37□□□□□ -0.59
ECHDC1-220ENST00000528402 VPREB3Q9UKI3 123 aa11.37□□□□□ -0.59
ECHDC1-220ENST00000528402 PRRC2AP48634 2157 aaKnown RBP11.37□□□□□ -0.59
ECHDC1-220ENST00000528402 UBR5O95071 2799 aaPredicted RBP11.37□□□□□ -0.59
ECHDC1-220ENST00000528402 FAM208BQ5VWN6 2430 aa11.37□□□□□ -0.59
ECHDC1-220ENST00000528402 IGHV4-59P01825 116 aa11.36□□□□□ -0.59
ECHDC1-220ENST00000528402 SLC35B1P78383 322 aa11.36□□□□□ -0.59
ECHDC1-220ENST00000528402 RIGQ13278 110 aa11.36□□□□□ -0.59
ECHDC1-220ENST00000528402 FAM162BQ5T6X4 162 aa11.36□□□□□ -0.59
ECHDC1-220ENST00000528402 BAGE3Q86Y29 109 aa11.36□□□□□ -0.59
ECHDC1-220ENST00000528402 PRR25Q96S07 402 aa11.36□□□□□ -0.59
ECHDC1-220ENST00000528402 PPP1R14DQ9NXH3 145 aa11.36□□□□□ -0.59
ECHDC1-220ENST00000528402 J3QKU1 62 aa11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 K7EMT4 169 aa11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 JOSD1Q15040 202 aaPredicted RBP11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 PYY3Q5JQD4 70 aa11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 BORCS7Q96B45 105 aa11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 Q96MF0 132 aa11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 NPFFR1Q9GZQ6 430 aa11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 CR1P17927 2039 aa11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 FAM106AQ4KMX7 169 aa11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 SAMD13Q5VXD3 122 aa11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 TCF24Q7RTU0 167 aa11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 GTSF1Q8WW33 167 aa11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 GLMPQ8WWB7 406 aa11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 PEF1Q9UBV8 284 aaKnown RBP11.35□□□□□ -0.59
ECHDC1-220ENST00000528402 ANKRD17O75179 2603 aaKnown RBP11.34□□□□□ -0.59
ECHDC1-220ENST00000528402 IGHV3OR16-8A0A075B7F1 116 aa11.34□□□□□ -0.59
ECHDC1-220ENST00000528402 TMEM189A5PLL7 270 aa11.34□□□□□ -0.59
ECHDC1-220ENST00000528402 FRMD6-AS1P0C7T7 363 aa11.34□□□□□ -0.59
ECHDC1-220ENST00000528402 PSMB8P28062 276 aa11.34□□□□□ -0.59
ECHDC1-220ENST00000528402 KLF5Q13887 457 aaPredicted RBP11.34□□□□□ -0.59
ECHDC1-220ENST00000528402 DMRTA1Q5VZB9 504 aa11.34□□□□□ -0.59
ECHDC1-220ENST00000528402 GPHB5Q86YW7 130 aa11.34□□□□□ -0.59
ECHDC1-220ENST00000528402 PGLYRP4Q96LB8 373 aa11.34□□□□□ -0.59
ECHDC1-220ENST00000528402 KLK15Q9H2R5 256 aa11.34□□□□□ -0.59
ECHDC1-220ENST00000528402 ZFYVE26Q68DK2 2539 aa11.33□□□□□ -0.6
ECHDC1-220ENST00000528402 IGKV2-40A0A087WW87 121 aaPredicted RBP11.33□□□□□ -0.6
ECHDC1-220ENST00000528402 A0A1B0GUT8 65 aa11.33□□□□□ -0.6
ECHDC1-220ENST00000528402 IGKV2D-40P01614 121 aaPredicted RBP11.33□□□□□ -0.6
ECHDC1-220ENST00000528402 ELANEP08246 267 aa11.33□□□□□ -0.6
ECHDC1-220ENST00000528402 CRIP1P50238 77 aa11.33□□□□□ -0.6
ECHDC1-220ENST00000528402 C8orf86Q6ZUL3 223 aa11.33□□□□□ -0.6
ECHDC1-220ENST00000528402 TMEM256Q8N2U0 113 aa11.33□□□□□ -0.6
ECHDC1-220ENST00000528402 GATD1Q8NB37 220 aa11.33□□□□□ -0.6
ECHDC1-220ENST00000528402 ASCL2Q99929 193 aa11.33□□□□□ -0.6
ECHDC1-220ENST00000528402 LENEPQ9Y5L5 61 aa11.33□□□□□ -0.6
ECHDC1-220ENST00000528402 GRIFINA4D1Z8 144 aa11.32□□□□□ -0.6
ECHDC1-220ENST00000528402 PCP4L1A6NKN8 68 aa11.32□□□□□ -0.6
ECHDC1-220ENST00000528402 FABP5P3A8MUU1 101 aa11.32□□□□□ -0.6
ECHDC1-220ENST00000528402 APOHP02749 345 aaPredicted RBP11.32□□□□□ -0.6
ECHDC1-220ENST00000528402 PLA2G2AP14555 144 aa11.32□□□□□ -0.6
ECHDC1-220ENST00000528402 SRIP30626 198 aa11.32□□□□□ -0.6
ECHDC1-220ENST00000528402 CAMPP49913 170 aa11.32□□□□□ -0.6
ECHDC1-220ENST00000528402 FOXE3Q13461 319 aa11.32□□□□□ -0.6
ECHDC1-220ENST00000528402 Q6ZS46 218 aa11.32□□□□□ -0.6
ECHDC1-220ENST00000528402 TMEM86BQ8N661 226 aa11.32□□□□□ -0.6
ECHDC1-220ENST00000528402 MAPK1IP1LQ8NDC0 245 aa11.32□□□□□ -0.6
ECHDC1-220ENST00000528402 C16orf92Q96LL3 132 aa11.32□□□□□ -0.6
ECHDC1-220ENST00000528402 C8orf49Q96NF6 230 aa11.32□□□□□ -0.6
ECHDC1-220ENST00000528402 SH2D1AO60880 128 aa11.31□□□□□ -0.6
ECHDC1-220ENST00000528402 SLAQ13239 276 aa11.31□□□□□ -0.6
ECHDC1-220ENST00000528402 C9orf47Q6ZRZ4 202 aa11.31□□□□□ -0.6
ECHDC1-220ENST00000528402 PSMG3-AS1Q96PY0 264 aa11.31□□□□□ -0.6
ECHDC1-220ENST00000528402 VGLL1Q99990 258 aa11.31□□□□□ -0.6
ECHDC1-220ENST00000528402 DAZ1Q9NQZ3 744 aaKnown RBP11.31□□□□□ -0.6
ECHDC1-220ENST00000528402 TP53TG3Q9ULZ0 132 aa11.31□□□□□ -0.6
ECHDC1-220ENST00000528402 UFC1Q9Y3C8 167 aa11.31□□□□□ -0.6
ECHDC1-220ENST00000528402 TRAV8-2A0A0B4J237 113 aa11.3□□□□□ -0.6
ECHDC1-220ENST00000528402 IGHV7-4-1A0A0J9YVY3 117 aa11.3□□□□□ -0.6
ECHDC1-220ENST00000528402 ZNF705FA8MVS1 300 aaPredicted RBP11.3□□□□□ -0.6
ECHDC1-220ENST00000528402 OVOL1O14753 267 aa11.3□□□□□ -0.6
ECHDC1-220ENST00000528402 ZNF207O43670 478 aaKnown RBP11.3□□□□□ -0.6
ECHDC1-220ENST00000528402 SERF1AO75920 110 aa11.3□□□□□ -0.6
ECHDC1-220ENST00000528402 IGHV3-11P01762 117 aa11.3□□□□□ -0.6
ECHDC1-220ENST00000528402 KIAA1644Q3SXP7 199 aa11.3□□□□□ -0.6
ECHDC1-220ENST00000528402 TMEM78Q5T7P6 136 aa11.3□□□□□ -0.6
ECHDC1-220ENST00000528402 GDF5OSQ5U4N7 250 aa11.3□□□□□ -0.6
ECHDC1-220ENST00000528402 KRTAP1-3Q8IUG1 177 aa11.3□□□□□ -0.6
ECHDC1-220ENST00000528402 LINC00477Q96M19 166 aa11.3□□□□□ -0.6
ECHDC1-220ENST00000528402 ALKBH7Q9BT30 221 aaPredicted RBP11.3□□□□□ -0.6
ECHDC1-220ENST00000528402 IGHV3-66A0A0C4DH42 116 aa11.29□□□□□ -0.6
ECHDC1-220ENST00000528402 TRBV12-3P01733 135 aa11.29□□□□□ -0.6
ECHDC1-220ENST00000528402 HLA-DMBP28068 263 aa11.29□□□□□ -0.6
ECHDC1-220ENST00000528402 ZNF138P52744 262 aa11.29□□□□□ -0.6
ECHDC1-220ENST00000528402 HIST1H1AQ02539 215 aaPredicted RBP11.29□□□□□ -0.6
ECHDC1-220ENST00000528402 IQCJQ1A5X6 159 aa11.29□□□□□ -0.6
ECHDC1-220ENST00000528402 UNQ9165/PRO28630Q6UXU0 137 aa11.29□□□□□ -0.6
ECHDC1-220ENST00000528402 SAMD10Q9BYL1 202 aa11.29□□□□□ -0.6
ECHDC1-220ENST00000528402 GSN-AS1Q9NRJ2 163 aa11.29□□□□□ -0.6
ECHDC1-220ENST00000528402 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
ECHDC1-220ENST00000528402 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
ECHDC1-220ENST00000528402 GZMBP10144 247 aa11.28□□□□□ -0.6
ECHDC1-220ENST00000528402 Q8N2B8 174 aa11.28□□□□□ -0.6
ECHDC1-220ENST00000528402 SIGLECL1Q8N7X8 197 aa11.28□□□□□ -0.6
ECHDC1-220ENST00000528402 RNF152Q8N8N0 203 aa11.28□□□□□ -0.6
ECHDC1-220ENST00000528402 KCNS1Q96KK3 526 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms