RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TNP2Q05952 138 aa15.65■□□□□ 0.1
TRAPPC4-208ENST00000527680 MORN5Q5VZ52 161 aa15.65■□□□□ 0.1
TRAPPC4-208ENST00000527680 SSX7Q7RTT5 188 aa15.65■□□□□ 0.1
TRAPPC4-208ENST00000527680 NRARPQ7Z6K4 114 aa15.65■□□□□ 0.1
TRAPPC4-208ENST00000527680 GNPNAT1Q96EK6 184 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC4-208ENST00000527680 C20orf85Q9H1P6 137 aa15.65■□□□□ 0.1
TRAPPC4-208ENST00000527680 SNURFLB1AK76 121 aa15.64■□□□□ 0.09
TRAPPC4-208ENST00000527680 GFI1BQ5VTD9 330 aa15.64■□□□□ 0.09
TRAPPC4-208ENST00000527680 TRAV5A0A0B4J249 113 aa15.63■□□□□ 0.09
TRAPPC4-208ENST00000527680 H3BQ15 152 aa15.63■□□□□ 0.09
TRAPPC4-208ENST00000527680 MIC13Q5XKP0 118 aa15.63■□□□□ 0.09
TRAPPC4-208ENST00000527680 OR1L4Q8NGR5 311 aa15.63■□□□□ 0.09
TRAPPC4-208ENST00000527680 TRAV6A0A075B6T7 132 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 TRAV26-1A0A087WT03 109 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 TRAV12-3A0A0B4J271 114 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 A0A0J9YY99 117 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 GAGE12BA1L429 117 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 FAM24AA6NFZ4 105 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 C16orf90A8MZG2 172 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 GAGE7O76087 117 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 RLN2P04090 185 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 GAGE12FP0CL80 117 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 GAGE12GP0CL81 117 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 GAGE12IP0CL82 117 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 IGLC2P0DOY2 106 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 PVALBP20472 110 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 GUK1Q16774 197 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 SAT2Q96F10 170 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 Q9H8V8 135 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 UQCC1Q9NVA1 299 aa15.62■□□□□ 0.09
TRAPPC4-208ENST00000527680 DYNC1H1Q14204 4646 aaKnown RBP15.61■□□□□ 0.09
TRAPPC4-208ENST00000527680 PLA2G10O15496 165 aa15.61■□□□□ 0.09
TRAPPC4-208ENST00000527680 LYRM1O43325 122 aa15.61■□□□□ 0.09
TRAPPC4-208ENST00000527680 CT45A10P0DMU9 189 aa15.61■□□□□ 0.09
TRAPPC4-208ENST00000527680 M6PRP20645 277 aa15.61■□□□□ 0.09
TRAPPC4-208ENST00000527680 LEPP41159 167 aa15.61■□□□□ 0.09
TRAPPC4-208ENST00000527680 PFDN5Q99471 154 aa15.61■□□□□ 0.09
TRAPPC4-208ENST00000527680 DNAH11Q96DT5 4516 aa15.61■□□□□ 0.09
TRAPPC4-208ENST00000527680 TCRBP04435 133 aa15.6■□□□□ 0.09
TRAPPC4-208ENST00000527680 C12orf45Q8N5I9 185 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC4-208ENST00000527680 SEC22CQ9BRL7 303 aa15.6■□□□□ 0.09
TRAPPC4-208ENST00000527680 S100A10P60903 97 aa15.59■□□□□ 0.09
TRAPPC4-208ENST00000527680 BAXQ07812 192 aa15.59■□□□□ 0.09
TRAPPC4-208ENST00000527680 RXFP4Q8TDU9 374 aa15.59■□□□□ 0.09
TRAPPC4-208ENST00000527680 ZNF431Q8TF32 576 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC4-208ENST00000527680 C2orf50Q96LR7 162 aa15.59■□□□□ 0.09
TRAPPC4-208ENST00000527680 WDR83OSQ9Y284 106 aa15.59■□□□□ 0.09
TRAPPC4-208ENST00000527680 S100A11P31949 105 aa15.58■□□□□ 0.08
TRAPPC4-208ENST00000527680 SLC39A9Q9NUM3 307 aa15.58■□□□□ 0.08
TRAPPC4-208ENST00000527680 ZNF586Q9NXT0 402 aa15.58■□□□□ 0.08
TRAPPC4-208ENST00000527680 UBE2L5PA0A1B0GUS4 154 aa15.57■□□□□ 0.08
TRAPPC4-208ENST00000527680 LINC00612Q8N6U2 182 aa15.57■□□□□ 0.08
TRAPPC4-208ENST00000527680 PYGO2Q9BRQ0 406 aa15.57■□□□□ 0.08
TRAPPC4-208ENST00000527680 NUDT15Q9NV35 164 aa15.57■□□□□ 0.08
TRAPPC4-208ENST00000527680 NPIPB6E9PJ23 425 aa15.56■□□□□ 0.08
TRAPPC4-208ENST00000527680 HOXA5P20719 270 aa15.56■□□□□ 0.08
TRAPPC4-208ENST00000527680 RPL29P47914 159 aaKnown RBP15.56■□□□□ 0.08
TRAPPC4-208ENST00000527680 SULT1A1P50225 295 aa15.56■□□□□ 0.08
TRAPPC4-208ENST00000527680 HBG1P69891 147 aa15.56■□□□□ 0.08
TRAPPC4-208ENST00000527680 HBG2P69892 147 aa15.56■□□□□ 0.08
TRAPPC4-208ENST00000527680 STX12Q86Y82 276 aa15.56■□□□□ 0.08
TRAPPC4-208ENST00000527680 ZNF503Q96F45 646 aa15.56■□□□□ 0.08
TRAPPC4-208ENST00000527680 ODF3Q96PU9 254 aa15.56■□□□□ 0.08
TRAPPC4-208ENST00000527680 TIMM9Q9Y5J7 89 aa15.56■□□□□ 0.08
TRAPPC4-208ENST00000527680 ERCC8Q13216 396 aa15.55■□□□□ 0.08
TRAPPC4-208ENST00000527680 TRGV2A0A075B6R0 118 aa15.54■□□□□ 0.08
TRAPPC4-208ENST00000527680 SLC25A5P05141 298 aaKnown RBP15.54■□□□□ 0.08
TRAPPC4-208ENST00000527680 H2AFB2P0C5Z0 115 aa15.54■□□□□ 0.08
TRAPPC4-208ENST00000527680 FGF7P21781 194 aa15.54■□□□□ 0.08
TRAPPC4-208ENST00000527680 ESRGQ1W209 222 aa15.54■□□□□ 0.08
TRAPPC4-208ENST00000527680 TTC32Q5I0X7 151 aa15.54■□□□□ 0.08
TRAPPC4-208ENST00000527680 Q6ZTI0 123 aa15.54■□□□□ 0.08
TRAPPC4-208ENST00000527680 TMEM252Q8N6L7 170 aa15.54■□□□□ 0.08
TRAPPC4-208ENST00000527680 C11orf1Q9H5F2 150 aa15.54■□□□□ 0.08
TRAPPC4-208ENST00000527680 LYRM2Q9NU23 88 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC4-208ENST00000527680 TRBV19A0A075B6N1 114 aa15.53■□□□□ 0.08
TRAPPC4-208ENST00000527680 M0R3E3 92 aa15.53■□□□□ 0.08
TRAPPC4-208ENST00000527680 ZNF253O75346 499 aa15.53■□□□□ 0.08
TRAPPC4-208ENST00000527680 DAZ2Q13117 558 aaKnown RBP15.53■□□□□ 0.08
TRAPPC4-208ENST00000527680 RAB32Q13637 225 aa15.53■□□□□ 0.08
TRAPPC4-208ENST00000527680 ATP6V1FQ16864 119 aa15.53■□□□□ 0.08
TRAPPC4-208ENST00000527680 VWC2Q2TAL6 325 aa15.53■□□□□ 0.08
TRAPPC4-208ENST00000527680 BLNKQ8WV28 456 aa15.53■□□□□ 0.08
TRAPPC4-208ENST00000527680 LINC00477Q96M19 166 aa15.53■□□□□ 0.08
TRAPPC4-208ENST00000527680 TMPRSS5Q9H3S3 457 aa15.53■□□□□ 0.08
TRAPPC4-208ENST00000527680 GSN-AS1Q9NRJ2 163 aa15.53■□□□□ 0.08
TRAPPC4-208ENST00000527680 IGSF23A1L1A6 192 aa15.52■□□□□ 0.08
TRAPPC4-208ENST00000527680 C7orf71A4D174 169 aa15.52■□□□□ 0.08
TRAPPC4-208ENST00000527680 HIST1H1EP10412 219 aaKnown RBP15.52■□□□□ 0.08
TRAPPC4-208ENST00000527680 RNASE4P34096 147 aaKnown RBP15.52■□□□□ 0.08
TRAPPC4-208ENST00000527680 MRPL53Q96EL3 112 aaKnown RBP15.52■□□□□ 0.08
TRAPPC4-208ENST00000527680 KRTAP4-5Q9BYR2 181 aa15.52■□□□□ 0.08
TRAPPC4-208ENST00000527680 GPN1Q9HCN4 374 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC4-208ENST00000527680 PRELID1Q9Y255 219 aa15.52■□□□□ 0.08
TRAPPC4-208ENST00000527680 FAM240BA0A1B0GVZ2 78 aa15.51■□□□□ 0.07
TRAPPC4-208ENST00000527680 H3BNG1 76 aa15.51■□□□□ 0.07
TRAPPC4-208ENST00000527680 ZNF680Q8NEM1 530 aa15.51■□□□□ 0.07
TRAPPC4-208ENST00000527680 AAMDCQ9H7C9 122 aa15.51■□□□□ 0.07
TRAPPC4-208ENST00000527680 TMEM14CQ9P0S9 112 aa15.51■□□□□ 0.07
TRAPPC4-208ENST00000527680 TRGV1A0A0A0MS02 117 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms