RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 ZNF705AQ6ZN79 300 aaPredicted RBP12.56□□□□□ -0.4
SNRNP35-204ENST00000527158 ZNF580Q9UK33 172 aa12.56□□□□□ -0.4
SNRNP35-204ENST00000527158 VPREB3Q9UKI3 123 aa12.56□□□□□ -0.4
SNRNP35-204ENST00000527158 MRPS12O15235 138 aaKnown RBP12.55□□□□□ -0.4
SNRNP35-204ENST00000527158 ZNF324O75467 553 aaPredicted RBP12.55□□□□□ -0.4
SNRNP35-204ENST00000527158 PF4V1P10720 104 aa12.55□□□□□ -0.4
SNRNP35-204ENST00000527158 AMTP48728 403 aa12.55□□□□□ -0.4
SNRNP35-204ENST00000527158 TEX29Q8N6K0 151 aa12.55□□□□□ -0.4
SNRNP35-204ENST00000527158 ZNF414Q96IQ9 312 aa12.55□□□□□ -0.4
SNRNP35-204ENST00000527158 TRAV34A0A0B4J273 112 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 TCRAP04437 139 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 RAB9AP51151 201 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 EXOC3-AS1Q8N2X6 119 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 ZFAND3Q9H8U3 227 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 NRN1Q9NPD7 142 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 IGHV3OR16-8A0A075B7F1 116 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 A0A1W2PS18 150 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 DIRC3C9JPN6 131 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 SMAD7O15105 426 aaKnown RBP12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 SRIP30626 198 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 PDE6HQ13956 83 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 CIARTQ8N365 385 aaPredicted RBP12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 C17orf77Q96MU5 243 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 KLF12Q9Y4X4 402 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 CSPG4Q6UVK1 2322 aa12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 PRRC2AP48634 2157 aaKnown RBP12.54□□□□□ -0.4
SNRNP35-204ENST00000527158 A0A0G2JLM5 398 aa12.53□□□□□ -0.4
SNRNP35-204ENST00000527158 IGLV1-40P01703 118 aa12.53□□□□□ -0.4
SNRNP35-204ENST00000527158 TCL1AP56279 114 aa12.53□□□□□ -0.4
SNRNP35-204ENST00000527158 KLF5Q13887 457 aaPredicted RBP12.53□□□□□ -0.4
SNRNP35-204ENST00000527158 MRPL54Q6P161 138 aaKnown RBP12.53□□□□□ -0.4
SNRNP35-204ENST00000527158 TSKUQ8WUA8 353 aa12.53□□□□□ -0.4
SNRNP35-204ENST00000527158 FMC1Q96HJ9 113 aa12.53□□□□□ -0.4
SNRNP35-204ENST00000527158 RPLP1P05386 114 aaKnown RBP12.53□□□□□ -0.4
SNRNP35-204ENST00000527158 FOSL1P15407 271 aa12.53□□□□□ -0.4
SNRNP35-204ENST00000527158 ARL3P36405 182 aa12.53□□□□□ -0.4
SNRNP35-204ENST00000527158 CT83Q5H943 113 aa12.53□□□□□ -0.4
SNRNP35-204ENST00000527158 KRTDAPP60985 99 aa12.52□□□□□ -0.4
SNRNP35-204ENST00000527158 SIGLEC15Q6ZMC9 328 aa12.52□□□□□ -0.4
SNRNP35-204ENST00000527158 BORCS7Q96B45 105 aa12.52□□□□□ -0.4
SNRNP35-204ENST00000527158 FOXC2Q99958 501 aa12.52□□□□□ -0.4
SNRNP35-204ENST00000527158 KLK15Q9H2R5 256 aa12.52□□□□□ -0.4
SNRNP35-204ENST00000527158 AAMDCQ9H7C9 122 aa12.52□□□□□ -0.4
SNRNP35-204ENST00000527158 F2Z2F3 143 aa12.52□□□□□ -0.41
SNRNP35-204ENST00000527158 HOXA3O43365 443 aaPredicted RBP12.52□□□□□ -0.41
SNRNP35-204ENST00000527158 SPINK4O60575 86 aa12.52□□□□□ -0.41
SNRNP35-204ENST00000527158 FRMD6-AS1P0C7T7 363 aa12.52□□□□□ -0.41
SNRNP35-204ENST00000527158 PSG9Q00887 426 aa12.52□□□□□ -0.41
SNRNP35-204ENST00000527158 CFHR3Q02985 330 aa12.52□□□□□ -0.41
SNRNP35-204ENST00000527158 NUDT10Q8NFP7 164 aa12.52□□□□□ -0.41
SNRNP35-204ENST00000527158 NUDT11Q96G61 164 aa12.52□□□□□ -0.41
SNRNP35-204ENST00000527158 GPR82Q96P67 336 aa12.52□□□□□ -0.41
SNRNP35-204ENST00000527158 METTL26Q96S19 204 aa12.52□□□□□ -0.41
SNRNP35-204ENST00000527158 PRSS22Q9GZN4 317 aa12.52□□□□□ -0.41
SNRNP35-204ENST00000527158 PAM16Q9Y3D7 125 aa12.52□□□□□ -0.41
SNRNP35-204ENST00000527158 PMCHL1Q16048 86 aa12.51□□□□□ -0.41
SNRNP35-204ENST00000527158 KLHDC1Q8N7A1 406 aa12.51□□□□□ -0.41
SNRNP35-204ENST00000527158 NHLRC2Q8NBF2 726 aa12.51□□□□□ -0.41
SNRNP35-204ENST00000527158 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.5□□□□□ -0.41
SNRNP35-204ENST00000527158 K7EQM0 130 aa12.5□□□□□ -0.41
SNRNP35-204ENST00000527158 BUB3O43684 328 aa12.5□□□□□ -0.41
SNRNP35-204ENST00000527158 SGK494Q96LW2 274 aa12.5□□□□□ -0.41
SNRNP35-204ENST00000527158 NPFFR1Q9GZQ6 430 aa12.5□□□□□ -0.41
SNRNP35-204ENST00000527158 ZNF492Q9P255 531 aa12.5□□□□□ -0.41
SNRNP35-204ENST00000527158 IGHV3-11P01762 117 aa12.5□□□□□ -0.41
SNRNP35-204ENST00000527158 TMEM95Q3KNT9 176 aa12.5□□□□□ -0.41
SNRNP35-204ENST00000527158 KIAA1644Q3SXP7 199 aa12.5□□□□□ -0.41
SNRNP35-204ENST00000527158 NUP35Q8NFH5 326 aa12.5□□□□□ -0.41
SNRNP35-204ENST00000527158 OR4X2Q8NGF9 303 aa12.5□□□□□ -0.41
SNRNP35-204ENST00000527158 CREBBPQ92793 2442 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 ZFHX3Q15911 3703 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 C20orf202A1L168 122 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 CLPSL1A2RUU4 121 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 PMCHP20382 165 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 SLC35B1P78383 322 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 GOLT1AQ6ZVE7 132 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 Q8N976 141 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 C18orf32Q8TCD1 76 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 GFRA4Q9GZZ7 299 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 UQCR10Q9UDW1 63 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 HELZ2Q9BYK8 2649 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 FAM231BA6NCW3 169 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 A8MWL6 223 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 IGHG4P01861 327 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 CSN1S1P47710 185 aa12.49□□□□□ -0.41
SNRNP35-204ENST00000527158 TMEM89A2RUT3 159 aa12.48□□□□□ -0.41
SNRNP35-204ENST00000527158 ZNF785A8K8V0 405 aa12.48□□□□□ -0.41
SNRNP35-204ENST00000527158 NDUFA4O00483 81 aa12.48□□□□□ -0.41
SNRNP35-204ENST00000527158 LTAP01374 205 aa12.48□□□□□ -0.41
SNRNP35-204ENST00000527158 CD33P20138 364 aa12.48□□□□□ -0.41
SNRNP35-204ENST00000527158 CTRLP40313 264 aa12.48□□□□□ -0.41
SNRNP35-204ENST00000527158 GAGE1Q13065 139 aa12.48□□□□□ -0.41
SNRNP35-204ENST00000527158 ZNF124Q15973 351 aa12.48□□□□□ -0.41
SNRNP35-204ENST00000527158 DMRTA1Q5VZB9 504 aa12.48□□□□□ -0.41
SNRNP35-204ENST00000527158 RCHY1Q96PM5 261 aa12.48□□□□□ -0.41
SNRNP35-204ENST00000527158 SMAD5-AS1Q9Y6J3 95 aa12.48□□□□□ -0.41
SNRNP35-204ENST00000527158 TRBV12-3P01733 135 aa12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 SLAQ13239 276 aa12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 LCNL1Q6ZST4 164 aa12.47□□□□□ -0.41
SNRNP35-204ENST00000527158 NIT1Q86X76 327 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms