RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 SMCO3A2RU48 225 aa13.01□□□□□ -0.33
CAPN1-206ENST00000526966 OR5G3P0C626 314 aa13.01□□□□□ -0.33
CAPN1-206ENST00000526966 HTN1P15515 57 aa13.01□□□□□ -0.33
CAPN1-206ENST00000526966 C9orf62Q8N4C0 152 aa13.01□□□□□ -0.33
CAPN1-206ENST00000526966 OR10J6PQ8NGY7 276 aa13.01□□□□□ -0.33
CAPN1-206ENST00000526966 RPUSD4Q96CM3 377 aaKnown RBP13.01□□□□□ -0.33
CAPN1-206ENST00000526966 C20orf144Q9BQM9 153 aa13.01□□□□□ -0.33
CAPN1-206ENST00000526966 Q9H3A6 140 aa13.01□□□□□ -0.33
CAPN1-206ENST00000526966 PPP1R14DQ9NXH3 145 aa13.01□□□□□ -0.33
CAPN1-206ENST00000526966 H7BYZ3 331 aa13□□□□□ -0.33
CAPN1-206ENST00000526966 K7EPK0 472 aa13□□□□□ -0.33
CAPN1-206ENST00000526966 ADAP1O75689 374 aa13□□□□□ -0.33
CAPN1-206ENST00000526966 CXCL2P19875 107 aa13□□□□□ -0.33
CAPN1-206ENST00000526966 POLR2GP62487 172 aaKnown RBP eCLIP13□□□□□ -0.33
CAPN1-206ENST00000526966 PATE2Q6UY27 113 aa13□□□□□ -0.33
CAPN1-206ENST00000526966 UPK3BQ9BT76 320 aa13□□□□□ -0.33
CAPN1-206ENST00000526966 TRAV26-1A0A087WT03 109 aa12.99□□□□□ -0.33
CAPN1-206ENST00000526966 BTF3P20290 206 aaKnown RBP12.99□□□□□ -0.33
CAPN1-206ENST00000526966 DLK1P80370 383 aa12.99□□□□□ -0.33
CAPN1-206ENST00000526966 S100A7AQ86SG5 101 aa12.99□□□□□ -0.33
CAPN1-206ENST00000526966 LRRC20Q8TCA0 184 aa12.99□□□□□ -0.33
CAPN1-206ENST00000526966 RXFP4Q8TDU9 374 aa12.99□□□□□ -0.33
CAPN1-206ENST00000526966 GNPNAT1Q96EK6 184 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-206ENST00000526966 PSENENQ9NZ42 101 aa12.99□□□□□ -0.33
CAPN1-206ENST00000526966 HSPB11Q9Y547 144 aa12.99□□□□□ -0.33
CAPN1-206ENST00000526966 HERC1Q15751 4861 aa12.99□□□□□ -0.33
CAPN1-206ENST00000526966 FNDC10F2Z333 226 aa12.98□□□□□ -0.33
CAPN1-206ENST00000526966 PRB4P10163 310 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-206ENST00000526966 M6PRP20645 277 aa12.98□□□□□ -0.33
CAPN1-206ENST00000526966 KIR3DS1Q14943 382 aa12.98□□□□□ -0.33
CAPN1-206ENST00000526966 LCN15Q6UWW0 184 aa12.98□□□□□ -0.33
CAPN1-206ENST00000526966 ARL6Q9H0F7 186 aa12.98□□□□□ -0.33
CAPN1-206ENST00000526966 ARV1Q9H2C2 271 aa12.98□□□□□ -0.33
CAPN1-206ENST00000526966 SCRT2Q9NQ03 307 aa12.98□□□□□ -0.33
CAPN1-206ENST00000526966 ZNF331Q9NQX6 463 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-206ENST00000526966 RNF24Q9Y225 148 aa12.98□□□□□ -0.33
CAPN1-206ENST00000526966 A0A1W2PPQ1 181 aa12.97□□□□□ -0.33
CAPN1-206ENST00000526966 SSNA1O43805 119 aa12.97□□□□□ -0.33
CAPN1-206ENST00000526966 HOXA5P20719 270 aa12.97□□□□□ -0.33
CAPN1-206ENST00000526966 KRTAP10-2P60368 255 aa12.97□□□□□ -0.33
CAPN1-206ENST00000526966 OR5I1Q13606 314 aa12.97□□□□□ -0.33
CAPN1-206ENST00000526966 Q5BKY6 102 aa12.97□□□□□ -0.33
CAPN1-206ENST00000526966 TMEM14EPQ6UXP3 125 aa12.97□□□□□ -0.33
CAPN1-206ENST00000526966 SMIM8Q96KF7 97 aa12.97□□□□□ -0.33
CAPN1-206ENST00000526966 SLC50A1Q9BRV3 221 aa12.97□□□□□ -0.33
CAPN1-206ENST00000526966 NPVFQ9HCQ7 196 aa12.97□□□□□ -0.33
CAPN1-206ENST00000526966 H3BNG1 76 aa12.96□□□□□ -0.33
CAPN1-206ENST00000526966 GIPP09681 153 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-206ENST00000526966 ESRGQ1W209 222 aa12.96□□□□□ -0.33
CAPN1-206ENST00000526966 PXDC1Q5TGL8 231 aa12.96□□□□□ -0.33
CAPN1-206ENST00000526966 GFI1BQ5VTD9 330 aa12.96□□□□□ -0.33
CAPN1-206ENST00000526966 MRPS16Q9Y3D3 137 aaKnown RBP12.96□□□□□ -0.33
CAPN1-206ENST00000526966 BOLA1Q9Y3E2 137 aa12.96□□□□□ -0.33
CAPN1-206ENST00000526966 A0A0J9YY99 117 aa12.95□□□□□ -0.34
CAPN1-206ENST00000526966 SSSCA1O60232 199 aa12.95□□□□□ -0.34
CAPN1-206ENST00000526966 IFNA7P01567 189 aa12.95□□□□□ -0.34
CAPN1-206ENST00000526966 SLC38A11Q08AI6 406 aa12.95□□□□□ -0.34
CAPN1-206ENST00000526966 IAH1Q2TAA2 248 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-206ENST00000526966 TEPPQ6URK8 271 aa12.95□□□□□ -0.34
CAPN1-206ENST00000526966 PARD6GQ9BYG4 376 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-206ENST00000526966 GAGE12BA1L429 117 aa12.94□□□□□ -0.34
CAPN1-206ENST00000526966 CCSO14618 274 aa12.94□□□□□ -0.34
CAPN1-206ENST00000526966 GAGE7O76087 117 aa12.94□□□□□ -0.34
CAPN1-206ENST00000526966 METTL15P1P0C7V9 234 aa12.94□□□□□ -0.34
CAPN1-206ENST00000526966 GAGE12FP0CL80 117 aa12.94□□□□□ -0.34
CAPN1-206ENST00000526966 GAGE12GP0CL81 117 aa12.94□□□□□ -0.34
CAPN1-206ENST00000526966 GAGE12IP0CL82 117 aa12.94□□□□□ -0.34
CAPN1-206ENST00000526966 CCDC28AQ8IWP9 274 aa12.94□□□□□ -0.34
CAPN1-206ENST00000526966 C2orf50Q96LR7 162 aa12.94□□□□□ -0.34
CAPN1-206ENST00000526966 LINC00862A6NCI5 91 aa12.93□□□□□ -0.34
CAPN1-206ENST00000526966 C5orf51A6NDU8 294 aa12.93□□□□□ -0.34
CAPN1-206ENST00000526966 PRAC2D3DTV9 90 aa12.93□□□□□ -0.34
CAPN1-206ENST00000526966 SLC17A3O00476 420 aa12.93□□□□□ -0.34
CAPN1-206ENST00000526966 RLN2P04090 185 aa12.93□□□□□ -0.34
CAPN1-206ENST00000526966 LINC00305Q7Z4B0 112 aa12.93□□□□□ -0.34
CAPN1-206ENST00000526966 ZNF546Q86UE3 836 aa12.93□□□□□ -0.34
CAPN1-206ENST00000526966 BPIFA4PQ86YQ2 179 aa12.93□□□□□ -0.34
CAPN1-206ENST00000526966 OR10P1Q8NGE3 313 aa12.93□□□□□ -0.34
CAPN1-206ENST00000526966 MGAT4CQ9UBM8 478 aa12.93□□□□□ -0.34
CAPN1-206ENST00000526966 FAM25EA8MYX2 175 aa12.92□□□□□ -0.34
CAPN1-206ENST00000526966 SNURFLB1AK76 121 aa12.92□□□□□ -0.34
CAPN1-206ENST00000526966 GOSR2O14653 212 aa12.92□□□□□ -0.34
CAPN1-206ENST00000526966 SNRPCP09234 159 aaKnown RBP12.92□□□□□ -0.34
CAPN1-206ENST00000526966 TEX261Q6UWH6 196 aa12.92□□□□□ -0.34
CAPN1-206ENST00000526966 ODF3Q96PU9 254 aa12.92□□□□□ -0.34
CAPN1-206ENST00000526966 AGPAT2O15120 278 aa12.91□□□□□ -0.34
CAPN1-206ENST00000526966 TSC22D2O75157 780 aa12.91□□□□□ -0.34
CAPN1-206ENST00000526966 IGLC2P0DOY2 106 aa12.91□□□□□ -0.34
CAPN1-206ENST00000526966 TAS2R30P59541 319 aa12.91□□□□□ -0.34
CAPN1-206ENST00000526966 DAZ2Q13117 558 aaKnown RBP12.91□□□□□ -0.34
CAPN1-206ENST00000526966 IL15RAQ13261 267 aa12.91□□□□□ -0.34
CAPN1-206ENST00000526966 MORN5Q5VZ52 161 aa12.91□□□□□ -0.34
CAPN1-206ENST00000526966 TMEM37Q8WXS4 190 aa12.91□□□□□ -0.34
CAPN1-206ENST00000526966 ZNF586Q9NXT0 402 aa12.91□□□□□ -0.34
CAPN1-206ENST00000526966 GSKIPQ9P0R6 139 aa12.91□□□□□ -0.34
CAPN1-206ENST00000526966 SIX6O95475 246 aa12.9□□□□□ -0.34
CAPN1-206ENST00000526966 H2BFSP57053 126 aa12.9□□□□□ -0.34
CAPN1-206ENST00000526966 ARL16Q0P5N6 197 aa12.9□□□□□ -0.34
CAPN1-206ENST00000526966 CLLU1Q5K131 121 aa12.9□□□□□ -0.34
CAPN1-206ENST00000526966 Q6ZRN7 208 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms