RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 GOLT1BQ9Y3E0 138 aa11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 KMT2CQ8NEZ4 4911 aaKnown RBP11.72□□□□□ -0.53
SSSCA1-202ENST00000526433 CXorf65A6NEN9 183 aa11.71□□□□□ -0.53
SSSCA1-202ENST00000526433 OR7C2O60412 319 aa11.71□□□□□ -0.53
SSSCA1-202ENST00000526433 OR10J4P0C629 311 aa11.71□□□□□ -0.53
SSSCA1-202ENST00000526433 ATP6V0CP27449 155 aa11.71□□□□□ -0.53
SSSCA1-202ENST00000526433 EXOC3-AS1Q8N2X6 119 aa11.71□□□□□ -0.53
SSSCA1-202ENST00000526433 ZNF503Q96F45 646 aa11.71□□□□□ -0.53
SSSCA1-202ENST00000526433 NEU1Q99519 415 aa11.71□□□□□ -0.53
SSSCA1-202ENST00000526433 PRELID1Q9Y255 219 aa11.71□□□□□ -0.53
SSSCA1-202ENST00000526433 A0A1W2PPV4 95 aa11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 SMIM9A6NGZ8 99 aa11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 BOLA2-SMG1P6H3BVE0 249 aa11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 M0R3E3 92 aa11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 CRXO43186 299 aaPredicted RBP11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 EIF3GO75821 320 aaKnown RBP eCLIP11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 TAS2R45P59539 299 aa11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 NANOS2P60321 138 aaKnown RBP11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 RAB2AP61019 212 aa11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 RPL7L1Q6DKI1 246 aaKnown RBP11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 OR10G4Q8NGN3 311 aa11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 OR10G9Q8NGN4 311 aa11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 OR10G7Q8NGN6 311 aa11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 MRPL53Q96EL3 112 aaKnown RBP11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 PSMG3Q9BT73 122 aaPredicted RBP11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 AAMDCQ9H7C9 122 aa11.7□□□□□ -0.54
SSSCA1-202ENST00000526433 TRAV12-2A0A075B6T6 113 aa11.69□□□□□ -0.54
SSSCA1-202ENST00000526433 BORCS7-ASMTA0A0B4J1R7 106 aa11.69□□□□□ -0.54
SSSCA1-202ENST00000526433 ARPC5O15511 151 aa11.69□□□□□ -0.54
SSSCA1-202ENST00000526433 ICAM4Q14773 271 aa11.69□□□□□ -0.54
SSSCA1-202ENST00000526433 KHDC3LQ587J8 217 aa11.69□□□□□ -0.54
SSSCA1-202ENST00000526433 FAM122CQ6P4D5 195 aa11.69□□□□□ -0.54
SSSCA1-202ENST00000526433 OR2G3Q8NGZ4 309 aa11.69□□□□□ -0.54
SSSCA1-202ENST00000526433 SERF2P84101 59 aa11.68□□□□□ -0.54
SSSCA1-202ENST00000526433 BAP18Q8IXM2 172 aa11.68□□□□□ -0.54
SSSCA1-202ENST00000526433 TMEM208Q9BTX3 173 aa11.68□□□□□ -0.54
SSSCA1-202ENST00000526433 NPIPB6E9PJ23 425 aa11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 TAAR5O14804 337 aa11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 INSP01308 110 aa11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 HBE1P02100 147 aa11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 CT45A10P0DMU9 189 aa11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 CDKN1BP46527 198 aa11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 RANP62826 216 aaKnown RBP11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 UBE2L3P68036 154 aaKnown RBP11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 CEMP1Q6PRD7 247 aaPredicted RBP11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 RPP25LQ8N5L8 163 aaKnown RBP11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 PHLDA1Q8WV24 401 aaPredicted RBP11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 GNPNAT1Q96EK6 184 aaPredicted RBP11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 PHYHIPLQ96FC7 376 aa11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 SH3BGRL3Q9H299 93 aa11.67□□□□□ -0.54
SSSCA1-202ENST00000526433 PLECQ15149 4684 aaKnown RBP11.66□□□□□ -0.54
SSSCA1-202ENST00000526433 HMGB3O15347 200 aaKnown RBP11.66□□□□□ -0.54
SSSCA1-202ENST00000526433 MBP02144 154 aa11.66□□□□□ -0.54
SSSCA1-202ENST00000526433 TSPOP30536 169 aa11.66□□□□□ -0.54
SSSCA1-202ENST00000526433 ERCC8Q13216 396 aa11.66□□□□□ -0.54
SSSCA1-202ENST00000526433 RRN3P1Q2M238 152 aa11.66□□□□□ -0.54
SSSCA1-202ENST00000526433 PQLC2Q6ZP29 291 aa11.66□□□□□ -0.54
SSSCA1-202ENST00000526433 LYPD1Q8N2G4 141 aa11.66□□□□□ -0.54
SSSCA1-202ENST00000526433 OR11H4Q8NGC9 324 aa11.66□□□□□ -0.54
SSSCA1-202ENST00000526433 CYTL1Q9NRR1 136 aa11.66□□□□□ -0.54
SSSCA1-202ENST00000526433 TMEM189A5PLL7 270 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 NUPR2A6NF83 97 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 HMSDA8MTL9 139 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 JTBO76095 146 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 PRM2P04554 102 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 CDC34P49427 236 aaPredicted RBP11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 EMP1P54849 157 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 KIR3DS1Q14943 382 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 Q6ZNX1 250 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 RAB24Q969Q5 203 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 LINC00477Q96M19 166 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 LINC01587Q99440 93 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 AGPAT4-IT1Q9H0P7 198 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 Q9H3A6 140 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 CELA1Q9UNI1 258 aa11.65□□□□□ -0.54
SSSCA1-202ENST00000526433 SACSQ9NZJ4 4579 aa11.64□□□□□ -0.55
SSSCA1-202ENST00000526433 LOC102723971A0A1B0GUV8 181 aa11.64□□□□□ -0.55
SSSCA1-202ENST00000526433 ZNF705GA8MUZ8 300 aaPredicted RBP11.64□□□□□ -0.55
SSSCA1-202ENST00000526433 LEPP41159 167 aa11.64□□□□□ -0.55
SSSCA1-202ENST00000526433 KCNRGQ8N5I3 272 aa11.64□□□□□ -0.55
SSSCA1-202ENST00000526433 ODF3Q96PU9 254 aa11.64□□□□□ -0.55
SSSCA1-202ENST00000526433 KLK5Q9Y337 293 aaPredicted RBP11.64□□□□□ -0.55
SSSCA1-202ENST00000526433 IGKV2-40A0A087WW87 121 aaPredicted RBP11.63□□□□□ -0.55
SSSCA1-202ENST00000526433 J3KRW8 73 aa11.63□□□□□ -0.55
SSSCA1-202ENST00000526433 IGKV2D-40P01614 121 aaPredicted RBP11.63□□□□□ -0.55
SSSCA1-202ENST00000526433 STAG3L2P0CL84 134 aa11.63□□□□□ -0.55
SSSCA1-202ENST00000526433 STAG3L3P0CL85 134 aa11.63□□□□□ -0.55
SSSCA1-202ENST00000526433 CSN1S1P47710 185 aa11.63□□□□□ -0.55
SSSCA1-202ENST00000526433 C9orf47Q6ZRZ4 202 aa11.63□□□□□ -0.55
SSSCA1-202ENST00000526433 TMEM256Q8N2U0 113 aa11.63□□□□□ -0.55
SSSCA1-202ENST00000526433 VGLL1Q99990 258 aa11.63□□□□□ -0.55
SSSCA1-202ENST00000526433 ACTR3CQ9C0K3 210 aaPredicted RBP11.63□□□□□ -0.55
SSSCA1-202ENST00000526433 PGPA6NDG6 321 aa11.62□□□□□ -0.55
SSSCA1-202ENST00000526433 SPART-AS1P0CW21 52 aa11.62□□□□□ -0.55
SSSCA1-202ENST00000526433 ARL14EPLP0DKL9 152 aa11.62□□□□□ -0.55
SSSCA1-202ENST00000526433 ZNF345Q14585 488 aa11.62□□□□□ -0.55
SSSCA1-202ENST00000526433 C12orf74Q32Q52 190 aa11.62□□□□□ -0.55
SSSCA1-202ENST00000526433 GFI1BQ5VTD9 330 aa11.62□□□□□ -0.55
SSSCA1-202ENST00000526433 ZNF767PQ75MW2 155 aa11.62□□□□□ -0.55
SSSCA1-202ENST00000526433 ST6GAL2Q96JF0 529 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms