RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 LINC00476Q8WZB0 136 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 OR4C12Q96R67 309 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 GFRA4Q9GZZ7 299 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 RAB9BQ9NP90 201 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 SERTAD4Q9NUC0 356 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 POLDIP2Q9Y2S7 368 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 SIGLEC9Q9Y336 463 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 OR2W1Q9Y3N9 320 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 V9GYV3 84 aa4.03□□□□□ -1.76
CD44-218ENST00000525469 KMT2CQ8NEZ4 4911 aaKnown RBP4.03□□□□□ -1.76
CD44-218ENST00000525469 UBE2L5PA0A1B0GUS4 154 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 A0A1W2PPI3 338 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 C5orf49A4QMS7 147 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 A8MZ25 164 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 NPIPB11E5RHQ5 1161 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 E9PLD3 99 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 C11orf98E9PRG8 122 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 J3KT08 172 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 RHODO00212 210 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 TNFRSF13BO14836 293 aaPredicted RBP4.02□□□□□ -1.77
CD44-218ENST00000525469 PLXNB1O43157 2135 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 MOSP00540 346 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 EGR2P11161 476 aaPredicted RBP4.02□□□□□ -1.77
CD44-218ENST00000525469 KIR2DS2P43631 304 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 CLDN17P56750 224 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 RPL30P62888 115 aaKnown RBP4.02□□□□□ -1.77
CD44-218ENST00000525469 GUSBP1Q15486 140 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 TNXAQ16473 311 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 OTPQ5XKR4 325 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 EBLN2Q6P2I7 272 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 Q6ZVH6 145 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 FADS6Q8N9I5 356 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 TEX45Q8NA69 505 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 RNF183Q96D59 192 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 SPAG8Q99932 426 aaPredicted RBP4.02□□□□□ -1.77
CD44-218ENST00000525469 NPCDR1Q9BY65 106 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 SLC25A22Q9H936 323 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 IL36RNQ9UBH0 155 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 PIGLQ9Y2B2 252 aa4.02□□□□□ -1.77
CD44-218ENST00000525469 IGKV1D-42A0A075B6H8 117 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 A0A087X0K7 114 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 TRBV6-6A0A0A6YYG2 114 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 A0A1W2PRE2 83 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 ZIC3O60481 467 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 SS18L1O75177 396 aaPredicted RBP4.01□□□□□ -1.77
CD44-218ENST00000525469 NTN1O95631 604 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 CRYGBP07316 175 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 FAM106CPP0CH98 169 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 MPV17P39210 176 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 NDUFV3P56181 108 aaKnown RBP4.01□□□□□ -1.77
CD44-218ENST00000525469 DSCR4P56555 118 aaPredicted RBP4.01□□□□□ -1.77
CD44-218ENST00000525469 RPL31P62899 125 aaKnown RBP4.01□□□□□ -1.77
CD44-218ENST00000525469 HBBP68871 147 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 PSG4Q00888 419 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 CATR1Q13166 79 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 EDDM3AQ14507 147 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 PSG5Q15238 335 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 FAM106AQ4KMX7 169 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 Q6AWC8 147 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 C1QL2Q7Z5L3 287 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 MOB3BQ86TA1 216 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 ATOH7Q8N100 152 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 OSR2Q8N2R0 312 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 NUP35Q8NFH5 326 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 ARPC1AQ92747 370 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 RDH5Q92781 318 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 DLX4Q92988 240 aaPredicted RBP4.01□□□□□ -1.77
CD44-218ENST00000525469 SPTSSAQ969W0 71 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 RCHY1Q96PM5 261 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 AMELYQ99218 206 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 TM2D2Q9BX73 214 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 IMUPQ9GZP8 106 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 AICDAQ9GZX7 198 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 NXF5Q9H1B4 397 aaKnown RBP4.01□□□□□ -1.77
CD44-218ENST00000525469 LINC00312Q9Y6C7 94 aa4.01□□□□□ -1.77
CD44-218ENST00000525469 TRGV11A0A075B6L2 103 aa4□□□□□ -1.77
CD44-218ENST00000525469 A0A087WX48 190 aa4□□□□□ -1.77
CD44-218ENST00000525469 A0A1B0GUS0 222 aa4□□□□□ -1.77
CD44-218ENST00000525469 A0A1B0GWB2 263 aa4□□□□□ -1.77
CD44-218ENST00000525469 A8MWL6 223 aa4□□□□□ -1.77
CD44-218ENST00000525469 GGTLC3B5MD39 225 aa4□□□□□ -1.77
CD44-218ENST00000525469 M0R1B8 84 aa4□□□□□ -1.77
CD44-218ENST00000525469 LYZL6O75951 148 aa4□□□□□ -1.77
CD44-218ENST00000525469 IGLV3-1P01715 115 aa4□□□□□ -1.77
CD44-218ENST00000525469 MSMBP08118 114 aa4□□□□□ -1.77
CD44-218ENST00000525469 ZNF688P0C7X2 276 aa4□□□□□ -1.77
CD44-218ENST00000525469 CTLA4P16410 223 aa4□□□□□ -1.77
CD44-218ENST00000525469 PRTN3P24158 256 aa4□□□□□ -1.77
CD44-218ENST00000525469 EMDP50402 254 aa4□□□□□ -1.77
CD44-218ENST00000525469 FOXG1P55316 489 aaPredicted RBP4□□□□□ -1.77
CD44-218ENST00000525469 LOXL3P58215 753 aa4□□□□□ -1.77
CD44-218ENST00000525469 IGLV3-21P80748 117 aaPredicted RBP4□□□□□ -1.77
CD44-218ENST00000525469 MEF2CQ06413 473 aaPredicted RBP4□□□□□ -1.77
CD44-218ENST00000525469 ZNF146Q15072 292 aa4□□□□□ -1.77
CD44-218ENST00000525469 NNATQ16517 81 aa4□□□□□ -1.77
CD44-218ENST00000525469 TBC1D28Q2M2D7 210 aa4□□□□□ -1.77
CD44-218ENST00000525469 SPANXN5Q5MJ07 72 aa4□□□□□ -1.77
CD44-218ENST00000525469 C2orf91Q6ZV80 131 aa4□□□□□ -1.77
CD44-218ENST00000525469 C6orf201Q7Z4U5 140 aa4□□□□□ -1.77
CD44-218ENST00000525469 TEN1Q86WV5 123 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms