RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 NDUFB1O75438 58 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 Q0VG73 95 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 FOXF2Q12947 444 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 FAM110DQ8TAY7 271 aaPredicted RBP11.09□□□□□ -0.63
LRRK1-202ENST00000525284 NCOR1O75376 2440 aa11.09□□□□□ -0.63
LRRK1-202ENST00000525284 RGPD3A6NKT7 1758 aaPredicted RBP11.08□□□□□ -0.63
LRRK1-202ENST00000525284 RGPD4Q7Z3J3 1758 aa11.08□□□□□ -0.63
LRRK1-202ENST00000525284 IGHV1-18A0A0C4DH31 117 aa11.08□□□□□ -0.64
LRRK1-202ENST00000525284 WIPF3A6NGB9 483 aa11.08□□□□□ -0.64
LRRK1-202ENST00000525284 U3KQE9 123 aa11.08□□□□□ -0.64
LRRK1-202ENST00000525284 PROP1O75360 226 aa11.08□□□□□ -0.64
LRRK1-202ENST00000525284 MRPL35Q9NZE8 188 aaKnown RBP11.08□□□□□ -0.64
LRRK1-202ENST00000525284 IGKV1-39P01597 117 aa11.08□□□□□ -0.64
LRRK1-202ENST00000525284 IGKV1D-39P04432 117 aa11.08□□□□□ -0.64
LRRK1-202ENST00000525284 IGHV1OR15-1A0A075B7D0 117 aa11.08□□□□□ -0.64
LRRK1-202ENST00000525284 IFI6P09912 130 aa11.08□□□□□ -0.64
LRRK1-202ENST00000525284 MLANAQ16655 118 aa11.08□□□□□ -0.64
LRRK1-202ENST00000525284 SIPA1L1O43166 1804 aa11.08□□□□□ -0.64
LRRK1-202ENST00000525284 IGLL1P15814 213 aa11.07□□□□□ -0.64
LRRK1-202ENST00000525284 IGLV3-21P80748 117 aaPredicted RBP11.07□□□□□ -0.64
LRRK1-202ENST00000525284 F5P12259 2224 aa11.07□□□□□ -0.64
LRRK1-202ENST00000525284 C12orf74Q32Q52 190 aa11.07□□□□□ -0.64
LRRK1-202ENST00000525284 LRRC37AA6NMS7 1700 aa11.07□□□□□ -0.64
LRRK1-202ENST00000525284 FAM236AA0A1B0GUQ0 79 aa11.07□□□□□ -0.64
LRRK1-202ENST00000525284 FAM236BA0A1B0GV22 79 aa11.07□□□□□ -0.64
LRRK1-202ENST00000525284 J3QQQ9 107 aa11.07□□□□□ -0.64
LRRK1-202ENST00000525284 PAQR4Q8N4S7 273 aaPredicted RBP11.07□□□□□ -0.64
LRRK1-202ENST00000525284 SP7Q8TDD2 431 aaPredicted RBP11.07□□□□□ -0.64
LRRK1-202ENST00000525284 ZNF831Q5JPB2 1677 aa11.07□□□□□ -0.64
LRRK1-202ENST00000525284 MRPL51Q4U2R6 128 aaKnown RBP11.06□□□□□ -0.64
LRRK1-202ENST00000525284 WIPF2Q8TF74 440 aaPredicted RBP11.06□□□□□ -0.64
LRRK1-202ENST00000525284 RNF183Q96D59 192 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 RMI2Q96E14 147 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 USMG5Q96IX5 58 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 REG4Q9BYZ8 158 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 IGKV1OR2-108A0A075B7D4 117 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 FAM223BA6NKX1 122 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 PRSS46E5RG02 174 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 C5orf64Q2M2E5 130 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 ZNF672Q499Z4 452 aaPredicted RBP11.06□□□□□ -0.64
LRRK1-202ENST00000525284 FAM223AQ8IWN6 122 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 DAZ1Q9NQZ3 744 aaKnown RBP11.06□□□□□ -0.64
LRRK1-202ENST00000525284 SIGLEC9Q9Y336 463 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 PAPPA2Q9BXP8 1791 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 H0YJW9 148 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 AHCTF1Q8WYP5 2266 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 CKAP5Q14008 2032 aa11.06□□□□□ -0.64
LRRK1-202ENST00000525284 XCL1P47992 114 aa11.05□□□□□ -0.64
LRRK1-202ENST00000525284 RPL18AQ02543 176 aaKnown RBP11.05□□□□□ -0.64
LRRK1-202ENST00000525284 DUX4L9Q6RFH8 374 aaPredicted RBP11.05□□□□□ -0.64
LRRK1-202ENST00000525284 A0A0U1RQV1 116 aa11.05□□□□□ -0.64
LRRK1-202ENST00000525284 FNDC10F2Z333 226 aa11.05□□□□□ -0.64
LRRK1-202ENST00000525284 HS3ST6Q96QI5 342 aa11.05□□□□□ -0.64
LRRK1-202ENST00000525284 IGKV2D-24A0A075B6R9 120 aa11.05□□□□□ -0.64
LRRK1-202ENST00000525284 EFNA4P52798 201 aa11.05□□□□□ -0.64
LRRK1-202ENST00000525284 ETDCA0A1B0GVM5 59 aa11.05□□□□□ -0.64
LRRK1-202ENST00000525284 LINC00205P59089 165 aa11.05□□□□□ -0.64
LRRK1-202ENST00000525284 TMEM14EPQ6UXP3 125 aa11.05□□□□□ -0.64
LRRK1-202ENST00000525284 ATOX1O00244 68 aa11.05□□□□□ -0.64
LRRK1-202ENST00000525284 PFN1P07737 140 aaKnown RBP11.05□□□□□ -0.64
LRRK1-202ENST00000525284 HERVK_113P63121 156 aa11.05□□□□□ -0.64
LRRK1-202ENST00000525284 Q6ZWC4 215 aa11.05□□□□□ -0.64
LRRK1-202ENST00000525284 C5orf24Q7Z6I8 188 aa11.05□□□□□ -0.64
LRRK1-202ENST00000525284 IGF2BP2-AS1Q96M15 143 aa11.04□□□□□ -0.64
LRRK1-202ENST00000525284 SVILO95425 2214 aa11.04□□□□□ -0.64
LRRK1-202ENST00000525284 CFC1BP0CG36 223 aa11.04□□□□□ -0.64
LRRK1-202ENST00000525284 CFC1P0CG37 223 aa11.04□□□□□ -0.64
LRRK1-202ENST00000525284 SH2D6Q7Z4S9 175 aa11.04□□□□□ -0.64
LRRK1-202ENST00000525284 MPLKIPQ8TAP9 179 aa11.04□□□□□ -0.64
LRRK1-202ENST00000525284 RTTNQ86VV8 2226 aa11.04□□□□□ -0.64
LRRK1-202ENST00000525284 FOXE3Q13461 319 aa11.04□□□□□ -0.64
LRRK1-202ENST00000525284 CHD5Q8TDI0 1954 aa11.04□□□□□ -0.64
LRRK1-202ENST00000525284 NREPQ16612 68 aa11.04□□□□□ -0.64
LRRK1-202ENST00000525284 ZFP2Q6ZN57 461 aa11.04□□□□□ -0.64
LRRK1-202ENST00000525284 TMEM75Q8N9X5 138 aa11.04□□□□□ -0.64
LRRK1-202ENST00000525284 TDRD15B5MCY1 1934 aaKnown RBP11.04□□□□□ -0.64
LRRK1-202ENST00000525284 VSIG2Q96IQ7 327 aa11.04□□□□□ -0.64
LRRK1-202ENST00000525284 GREB1LQ9C091 1923 aaPredicted RBP11.04□□□□□ -0.64
LRRK1-202ENST00000525284 IGKV1-12A0A0C4DH73 117 aa11.03□□□□□ -0.64
LRRK1-202ENST00000525284 NTN3O00634 580 aaPredicted RBP11.03□□□□□ -0.64
LRRK1-202ENST00000525284 NPYP01303 97 aa11.03□□□□□ -0.64
LRRK1-202ENST00000525284 IGKV1D-12P01611 117 aa11.03□□□□□ -0.64
LRRK1-202ENST00000525284 COX7B2Q8TF08 81 aa11.03□□□□□ -0.64
LRRK1-202ENST00000525284 PRDM6Q9NQX0 595 aa11.03□□□□□ -0.64
LRRK1-202ENST00000525284 PIKFYVEQ9Y2I7 2098 aa11.03□□□□□ -0.64
LRRK1-202ENST00000525284 BRWD3Q6RI45 1802 aa11.03□□□□□ -0.64
LRRK1-202ENST00000525284 LGALS9BQ3B8N2 356 aa11.03□□□□□ -0.64
LRRK1-202ENST00000525284 LGALS9CQ6DKI2 356 aa11.03□□□□□ -0.64
LRRK1-202ENST00000525284 SHANK2-AS3Q9BTD1 123 aa11.03□□□□□ -0.64
LRRK1-202ENST00000525284 MINOS1Q5TGZ0 78 aa11.03□□□□□ -0.64
LRRK1-202ENST00000525284 MINOS1-NBL1R4GNA1 71 aa11.03□□□□□ -0.64
LRRK1-202ENST00000525284 DKK4Q9UBT3 224 aa11.03□□□□□ -0.64
LRRK1-202ENST00000525284 A0A0B4J2C4 111 aa11.02□□□□□ -0.64
LRRK1-202ENST00000525284 BUB1B-PAK6H3BSN5 160 aa11.02□□□□□ -0.64
LRRK1-202ENST00000525284 PSPNO60542 156 aa11.02□□□□□ -0.64
LRRK1-202ENST00000525284 RNF114Q9Y508 228 aa11.02□□□□□ -0.64
LRRK1-202ENST00000525284 Q6ZVH6 145 aa11.02□□□□□ -0.65
LRRK1-202ENST00000525284 RALGAPA1Q6GYQ0 2036 aa11.02□□□□□ -0.65
LRRK1-202ENST00000525284 LINC00473A8K010 186 aa11.02□□□□□ -0.65
LRRK1-202ENST00000525284 CD177Q8N6Q3 437 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms