RNA–Protein interactions for RNA: ENST00000524325.5

TSNARE1-208, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TSNARE1, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-208ENST00000524325 TRAV2A0A0B4J234 112 aa16.9■□□□□ 0.3
TSNARE1-208ENST00000524325 A0A1W2PRE2 83 aa16.9■□□□□ 0.3
TSNARE1-208ENST00000524325 KNCNA6PVL3 124 aa16.9■□□□□ 0.3
TSNARE1-208ENST00000524325 EGFEM1PQ0D2K5 195 aa16.9■□□□□ 0.3
TSNARE1-208ENST00000524325 NBEAL1Q6ZS30 2694 aa16.9■□□□□ 0.3
TSNARE1-208ENST00000524325 SLC25A5P05141 298 aaKnown RBP16.89■□□□□ 0.3
TSNARE1-208ENST00000524325 SRSF3P84103 164 aaKnown RBP16.89■□□□□ 0.3
TSNARE1-208ENST00000524325 TOR2AQ5JU69 321 aa16.89■□□□□ 0.3
TSNARE1-208ENST00000524325 RXFP4Q8TDU9 374 aa16.89■□□□□ 0.3
TSNARE1-208ENST00000524325 RPUSD4Q96CM3 377 aaKnown RBP16.89■□□□□ 0.3
TSNARE1-208ENST00000524325 C19orf73Q9NVV2 129 aa16.89■□□□□ 0.3
TSNARE1-208ENST00000524325 BCL2P10415 239 aa16.89■□□□□ 0.29
TSNARE1-208ENST00000524325 IGKV2-40A0A087WW87 121 aaPredicted RBP16.88■□□□□ 0.29
TSNARE1-208ENST00000524325 C11orf94C9JXX5 98 aa16.88■□□□□ 0.29
TSNARE1-208ENST00000524325 IGKV2D-40P01614 121 aaPredicted RBP16.88■□□□□ 0.29
TSNARE1-208ENST00000524325 DEFB125Q8N687 156 aa16.88■□□□□ 0.29
TSNARE1-208ENST00000524325 SGK494Q96LW2 274 aa16.88■□□□□ 0.29
TSNARE1-208ENST00000524325 ASCL2Q99929 193 aa16.88■□□□□ 0.29
TSNARE1-208ENST00000524325 MANBALQ9NQG1 85 aa16.88■□□□□ 0.29
TSNARE1-208ENST00000524325 RBFOX3A6NFN3 312 aa16.88■□□□□ 0.29
TSNARE1-208ENST00000524325 LYPD1Q8N2G4 141 aa16.88■□□□□ 0.29
TSNARE1-208ENST00000524325 EIF5A2Q9GZV4 153 aaKnown RBP16.88■□□□□ 0.29
TSNARE1-208ENST00000524325 LOC102723971A0A1B0GUV8 181 aa16.87■□□□□ 0.29
TSNARE1-208ENST00000524325 OR11H12B2RN74 326 aa16.87■□□□□ 0.29
TSNARE1-208ENST00000524325 ACTL10Q5JWF8 245 aa16.87■□□□□ 0.29
TSNARE1-208ENST00000524325 GTSCR1Q86UQ5 136 aa16.87■□□□□ 0.29
TSNARE1-208ENST00000524325 CCDC28AQ8IWP9 274 aa16.87■□□□□ 0.29
TSNARE1-208ENST00000524325 CMTM2Q8TAZ6 248 aa16.87■□□□□ 0.29
TSNARE1-208ENST00000524325 LINC00479Q96M42 142 aa16.87■□□□□ 0.29
TSNARE1-208ENST00000524325 CITED4Q96RK1 184 aa16.87■□□□□ 0.29
TSNARE1-208ENST00000524325 IGKV3-20P01619 116 aa16.86■□□□□ 0.29
TSNARE1-208ENST00000524325 PPT1P50897 306 aa16.86■□□□□ 0.29
TSNARE1-208ENST00000524325 ERCC8Q13216 396 aa16.86■□□□□ 0.29
TSNARE1-208ENST00000524325 Q8N1Y9 231 aa16.86■□□□□ 0.29
TSNARE1-208ENST00000524325 FAM210AQ96ND0 272 aa16.86■□□□□ 0.29
TSNARE1-208ENST00000524325 IFNA1P01562 189 aa16.86■□□□□ 0.29
TSNARE1-208ENST00000524325 SAMD13Q5VXD3 122 aa16.86■□□□□ 0.29
TSNARE1-208ENST00000524325 GOLT1AQ6ZVE7 132 aa16.86■□□□□ 0.29
TSNARE1-208ENST00000524325 EPDR1Q9UM22 224 aa16.86■□□□□ 0.29
TSNARE1-208ENST00000524325 SCO2A0A1W2PP80 73 aa16.85■□□□□ 0.29
TSNARE1-208ENST00000524325 VAX2Q9UIW0 290 aa16.85■□□□□ 0.29
TSNARE1-208ENST00000524325 DNAH3Q8TD57 4116 aa16.85■□□□□ 0.29
TSNARE1-208ENST00000524325 TRAV8-1A0A0A6YYK1 113 aa16.84■□□□□ 0.29
TSNARE1-208ENST00000524325 DIRC3C9JPN6 131 aa16.84■□□□□ 0.29
TSNARE1-208ENST00000524325 MEF2BQ02080 365 aaPredicted RBP16.84■□□□□ 0.29
TSNARE1-208ENST00000524325 C5orf17Q8NAS9 161 aa16.84■□□□□ 0.29
TSNARE1-208ENST00000524325 VGLL1Q99990 258 aa16.84■□□□□ 0.29
TSNARE1-208ENST00000524325 TRAV34A0A0B4J273 112 aa16.84■□□□□ 0.29
TSNARE1-208ENST00000524325 C9JQL5 133 aa16.84■□□□□ 0.29
TSNARE1-208ENST00000524325 HIST1H1AQ02539 215 aaPredicted RBP16.84■□□□□ 0.29
TSNARE1-208ENST00000524325 PMS2P11Q13670 270 aa16.84■□□□□ 0.29
TSNARE1-208ENST00000524325 CSN1S1P47710 185 aa16.83■□□□□ 0.28
TSNARE1-208ENST00000524325 TCRAP04437 139 aa16.82■□□□□ 0.28
TSNARE1-208ENST00000524325 ZNF506Q5JVG8 444 aa16.82■□□□□ 0.28
TSNARE1-208ENST00000524325 OR8A1Q8NGG7 326 aa16.82■□□□□ 0.28
TSNARE1-208ENST00000524325 OR4B1Q8NGF8 309 aa16.82■□□□□ 0.28
TSNARE1-208ENST00000524325 PRELID1Q9Y255 219 aa16.82■□□□□ 0.28
TSNARE1-208ENST00000524325 ARL2-SNX15V9GYD0 113 aa16.82■□□□□ 0.28
TSNARE1-208ENST00000524325 PEX7O00628 323 aa16.81■□□□□ 0.28
TSNARE1-208ENST00000524325 CEBPGP53567 150 aa16.81■□□□□ 0.28
TSNARE1-208ENST00000524325 DERL1Q9BUN8 251 aa16.81■□□□□ 0.28
TSNARE1-208ENST00000524325 NKX6-2Q9C056 277 aaPredicted RBP16.81■□□□□ 0.28
TSNARE1-208ENST00000524325 SAV1Q9H4B6 383 aaPredicted RBP16.81■□□□□ 0.28
TSNARE1-208ENST00000524325 A0A0J9YX75 114 aa16.8■□□□□ 0.28
TSNARE1-208ENST00000524325 CNN1P51911 297 aaKnown RBP16.8■□□□□ 0.28
TSNARE1-208ENST00000524325 Q8TAT8 98 aa16.8■□□□□ 0.28
TSNARE1-208ENST00000524325 MRPL53Q96EL3 112 aaKnown RBP16.8■□□□□ 0.28
TSNARE1-208ENST00000524325 EBLN2Q6P2I7 272 aa16.8■□□□□ 0.28
TSNARE1-208ENST00000524325 FOXI2Q6ZQN5 318 aa16.8■□□□□ 0.28
TSNARE1-208ENST00000524325 AGPAT4-IT1Q9H0P7 198 aa16.8■□□□□ 0.28
TSNARE1-208ENST00000524325 CLEC5AQ9NY25 188 aa16.8■□□□□ 0.28
TSNARE1-208ENST00000524325 RPL35AP18077 110 aaKnown RBP16.79■□□□□ 0.28
TSNARE1-208ENST00000524325 ATG101Q9BSB4 218 aa16.79■□□□□ 0.28
TSNARE1-208ENST00000524325 H3BMM0 161 aa16.78■□□□□ 0.28
TSNARE1-208ENST00000524325 KPRPQ5T749 579 aaPredicted RBP16.78■□□□□ 0.28
TSNARE1-208ENST00000524325 COMMD7Q86VX2 200 aa16.78■□□□□ 0.28
TSNARE1-208ENST00000524325 OR10J6PQ8NGY7 276 aa16.78■□□□□ 0.28
TSNARE1-208ENST00000524325 SRD5A3Q9H8P0 318 aa16.78■□□□□ 0.28
TSNARE1-208ENST00000524325 AGRNO00468 2067 aa16.78■□□□□ 0.28
TSNARE1-208ENST00000524325 RBMY1BA6NDE4 496 aaKnown RBP16.78■□□□□ 0.28
TSNARE1-208ENST00000524325 RBMY1EA6NEQ0 496 aaKnown RBP16.78■□□□□ 0.28
TSNARE1-208ENST00000524325 RBMY1DP0C7P1 496 aaKnown RBP16.78■□□□□ 0.28
TSNARE1-208ENST00000524325 AURKAIP1Q9NWT8 199 aaPredicted RBP16.78■□□□□ 0.28
TSNARE1-208ENST00000524325 HLA-DRB4P13762 266 aa16.77■□□□□ 0.28
TSNARE1-208ENST00000524325 FXYD7P58549 80 aa16.77■□□□□ 0.28
TSNARE1-208ENST00000524325 CYB561D1Q8N8Q1 229 aa16.77■□□□□ 0.28
TSNARE1-208ENST00000524325 MED9Q9NWA0 146 aa16.77■□□□□ 0.28
TSNARE1-208ENST00000524325 HLA-DRB4X5D2U9 266 aa16.77■□□□□ 0.28
TSNARE1-208ENST00000524325 STHQ8IWL8 128 aa16.77■□□□□ 0.27
TSNARE1-208ENST00000524325 C2CD4CQ8TF44 421 aa16.77■□□□□ 0.27
TSNARE1-208ENST00000524325 FAM110AQ9BQ89 295 aa16.77■□□□□ 0.27
TSNARE1-208ENST00000524325 IGLV2-11P01706 119 aa16.76■□□□□ 0.27
TSNARE1-208ENST00000524325 CT45A10P0DMU9 189 aa16.76■□□□□ 0.27
TSNARE1-208ENST00000524325 CMC4P56277 68 aaPredicted RBP16.76■□□□□ 0.27
TSNARE1-208ENST00000524325 HIST1H2BAQ96A08 127 aa16.76■□□□□ 0.27
TSNARE1-208ENST00000524325 TREM1Q9NP99 234 aa16.76■□□□□ 0.27
TSNARE1-208ENST00000524325 LINC00862A6NCI5 91 aa16.75■□□□□ 0.27
TSNARE1-208ENST00000524325 J3KRW8 73 aa16.75■□□□□ 0.27
TSNARE1-208ENST00000524325 PDE6DO43924 150 aa16.75■□□□□ 0.27
TSNARE1-208ENST00000524325 SRP19P09132 144 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms