RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 ZNF503Q96F45 646 aa6.8□□□□□ -1.32
PABPC1-222ENST00000523555 KLK5Q9Y337 293 aaPredicted RBP6.8□□□□□ -1.32
PABPC1-222ENST00000523555 TRBV19A0A075B6N1 114 aa6.79□□□□□ -1.32
PABPC1-222ENST00000523555 LOC102723971A0A1B0GUV8 181 aa6.79□□□□□ -1.32
PABPC1-222ENST00000523555 IGLL5B9A064 214 aa6.79□□□□□ -1.32
PABPC1-222ENST00000523555 FAM222AQ5U5X8 452 aa6.79□□□□□ -1.32
PABPC1-222ENST00000523555 EXOC3-AS1Q8N2X6 119 aa6.79□□□□□ -1.32
PABPC1-222ENST00000523555 C2CD4CQ8TF44 421 aa6.79□□□□□ -1.32
PABPC1-222ENST00000523555 BLNKQ8WV28 456 aa6.79□□□□□ -1.32
PABPC1-222ENST00000523555 TMEM14CQ9P0S9 112 aa6.79□□□□□ -1.32
PABPC1-222ENST00000523555 DKK2Q9UBU2 259 aa6.79□□□□□ -1.32
PABPC1-222ENST00000523555 APLNQ9ULZ1 77 aa6.79□□□□□ -1.32
PABPC1-222ENST00000523555 GOLT1BQ9Y3E0 138 aa6.79□□□□□ -1.32
PABPC1-222ENST00000523555 FAT2Q9NYQ8 4349 aa6.79□□□□□ -1.32
PABPC1-222ENST00000523555 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
PABPC1-222ENST00000523555 PLAC8L1A1L4L8 177 aa6.78□□□□□ -1.32
PABPC1-222ENST00000523555 SMIM9A6NGZ8 99 aa6.78□□□□□ -1.32
PABPC1-222ENST00000523555 J3KRW8 73 aa6.78□□□□□ -1.32
PABPC1-222ENST00000523555 INSP01308 110 aa6.78□□□□□ -1.32
PABPC1-222ENST00000523555 HBE1P02100 147 aa6.78□□□□□ -1.32
PABPC1-222ENST00000523555 OR10J4P0C629 311 aa6.78□□□□□ -1.32
PABPC1-222ENST00000523555 PET100P0DJ07 73 aa6.78□□□□□ -1.32
PABPC1-222ENST00000523555 CT45A10P0DMU9 189 aa6.78□□□□□ -1.32
PABPC1-222ENST00000523555 HIST1H1EP10412 219 aaKnown RBP6.78□□□□□ -1.32
PABPC1-222ENST00000523555 ERCC8Q13216 396 aa6.78□□□□□ -1.32
PABPC1-222ENST00000523555 RPP25LQ8N5L8 163 aaKnown RBP6.78□□□□□ -1.32
PABPC1-222ENST00000523555 FXYD5Q96DB9 178 aa6.78□□□□□ -1.32
PABPC1-222ENST00000523555 MED28Q9H204 178 aa6.78□□□□□ -1.32
PABPC1-222ENST00000523555 RNF24Q9Y225 148 aa6.78□□□□□ -1.32
PABPC1-222ENST00000523555 YTHDF2Q9Y5A9 579 aaKnown RBP6.78□□□□□ -1.32
PABPC1-222ENST00000523555 DNAH17Q9UFH2 4485 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 IGHV4-4A0A075B6R2 117 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 DEFB131BA0A096LNP1 70 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 TRAV10A0A0B4J240 114 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 C11orf94C9JXX5 98 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 G3V3Q6 166 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 ZNF253O75346 499 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 CDKN1BP46527 198 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 GUK1Q16774 197 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 RRN3P1Q2M238 152 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 FFAR4Q5NUL3 377 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 GFI1BQ5VTD9 330 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 PHYHIPLQ96FC7 376 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 TMEM208Q9BTX3 173 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 OR51M1Q9H341 326 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 FUT9Q9Y231 359 aa6.77□□□□□ -1.33
PABPC1-222ENST00000523555 IGKV2-40A0A087WW87 121 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-222ENST00000523555 NPIPB6E9PJ23 425 aa6.76□□□□□ -1.33
PABPC1-222ENST00000523555 C17orf112F2Z3M2 114 aa6.76□□□□□ -1.33
PABPC1-222ENST00000523555 IGKV2D-40P01614 121 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-222ENST00000523555 AMBPP02760 352 aa6.76□□□□□ -1.33
PABPC1-222ENST00000523555 SPART-AS1P0CW21 52 aa6.76□□□□□ -1.33
PABPC1-222ENST00000523555 ICAM4Q14773 271 aa6.76□□□□□ -1.33
PABPC1-222ENST00000523555 FAM122CQ6P4D5 195 aa6.76□□□□□ -1.33
PABPC1-222ENST00000523555 Q6ZQT7 251 aa6.76□□□□□ -1.33
PABPC1-222ENST00000523555 OR10J6PQ8NGY7 276 aa6.76□□□□□ -1.33
PABPC1-222ENST00000523555 LINC01587Q99440 93 aa6.76□□□□□ -1.33
PABPC1-222ENST00000523555 NIPSNAP3BQ9BS92 247 aa6.76□□□□□ -1.33
PABPC1-222ENST00000523555 PAXXQ9BUH6 204 aa6.76□□□□□ -1.33
PABPC1-222ENST00000523555 MRPL32Q9BYC8 188 aaKnown RBP6.76□□□□□ -1.33
PABPC1-222ENST00000523555 PPP1R14DQ9NXH3 145 aa6.76□□□□□ -1.33
PABPC1-222ENST00000523555 TIMM9Q9Y5J7 89 aa6.76□□□□□ -1.33
PABPC1-222ENST00000523555 NACAE9PAV3 2078 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 TMEM189A5PLL7 270 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 RNF222A6NCQ9 220 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 IFNA5P01569 189 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 NBEAP1P0C6P0 100 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 HTN1P15515 57 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 RAB2AP61019 212 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 PDE6HQ13956 83 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 OXA1LQ15070 435 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 RGS21Q2M5E4 152 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 PRR9Q5T870 116 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 LGALS9CQ6DKI2 356 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 SCGB1C1Q8TD33 95 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 RNF141Q8WVD5 230 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 MRPL53Q96EL3 112 aaKnown RBP6.75□□□□□ -1.33
PABPC1-222ENST00000523555 FAM19A4Q96LR4 140 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 AQP10Q96PS8 301 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 VGLL1Q99990 258 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 AGPAT4-IT1Q9H0P7 198 aa6.75□□□□□ -1.33
PABPC1-222ENST00000523555 TRAV12-3A0A0B4J271 114 aa6.74□□□□□ -1.33
PABPC1-222ENST00000523555 HMGB3O15347 200 aaKnown RBP6.74□□□□□ -1.33
PABPC1-222ENST00000523555 OR7C2O60412 319 aa6.74□□□□□ -1.33
PABPC1-222ENST00000523555 GIPP09681 153 aaPredicted RBP6.74□□□□□ -1.33
PABPC1-222ENST00000523555 HTN3P15516 51 aa6.74□□□□□ -1.33
PABPC1-222ENST00000523555 CD300CQ08708 224 aa6.74□□□□□ -1.33
PABPC1-222ENST00000523555 BTN1A1Q13410 526 aa6.74□□□□□ -1.33
PABPC1-222ENST00000523555 HSD17B11Q8NBQ5 300 aa6.74□□□□□ -1.33
PABPC1-222ENST00000523555 RNASE8Q8TDE3 154 aaKnown RBP6.74□□□□□ -1.33
PABPC1-222ENST00000523555 SH3BGRL3Q9H299 93 aa6.74□□□□□ -1.33
PABPC1-222ENST00000523555 KCNIP2Q9NS61 270 aa6.74□□□□□ -1.33
PABPC1-222ENST00000523555 SMLR1H3BR10 107 aa6.73□□□□□ -1.33
PABPC1-222ENST00000523555 ATP6V0CP27449 155 aa6.73□□□□□ -1.33
PABPC1-222ENST00000523555 TSPOP30536 169 aa6.73□□□□□ -1.33
PABPC1-222ENST00000523555 TAS2R60P59551 318 aa6.73□□□□□ -1.33
PABPC1-222ENST00000523555 DAD1P61803 113 aa6.73□□□□□ -1.33
PABPC1-222ENST00000523555 RANP62826 216 aaKnown RBP6.73□□□□□ -1.33
PABPC1-222ENST00000523555 UBE2L3P68036 154 aaKnown RBP6.73□□□□□ -1.33
PABPC1-222ENST00000523555 SSX7Q7RTT5 188 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms