RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 OR4C12Q96R67 309 aa1.24□□□□□ -2.21
PCM1-219ENST00000523540 NAA38Q9BRA0 125 aaKnown RBP1.24□□□□□ -2.21
PCM1-219ENST00000523540 TCEAL2Q9H3H9 227 aaPredicted RBP1.24□□□□□ -2.21
PCM1-219ENST00000523540 RERGLQ9H628 205 aa1.24□□□□□ -2.21
PCM1-219ENST00000523540 OTORQ9NRC9 128 aa1.24□□□□□ -2.21
PCM1-219ENST00000523540 MAPKBP1O60336 1514 aa1.24□□□□□ -2.21
PCM1-219ENST00000523540 KIF13AQ9H1H9 1805 aa1.24□□□□□ -2.21
PCM1-219ENST00000523540 IFT140Q96RY7 1462 aa1.24□□□□□ -2.21
PCM1-219ENST00000523540 KDM6AO15550 1401 aaPredicted RBP1.23□□□□□ -2.21
PCM1-219ENST00000523540 CPSF1Q10570 1443 aaKnown RBP1.23□□□□□ -2.21
PCM1-219ENST00000523540 RRBP1Q9P2E9 1410 aaKnown RBP1.23□□□□□ -2.21
PCM1-219ENST00000523540 KIAA1107Q9UPP5 1409 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 PTPRBP23467 1997 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 GLI3P10071 1580 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 TRAV27A0A087WT01 109 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 IGKV1D-43A0A0B4J1Z2 117 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 PNMA8CA0A1B0GUJ8 204 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 SMIM31A0A1B0GVY4 71 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 ODAMA1E959 279 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 C1orf196B1AJZ1 125 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 H3BQF6 201 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 I3L521 148 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 CDC42EP2O14613 210 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 TAX1BP3O14907 124 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 PLA2G10O15496 165 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 OR2T1O43869 369 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 CST7O76096 145 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 NPYP01303 97 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 IGKV1-5P01602 117 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 ZNF705BP0CI00 300 aaPredicted RBP1.23□□□□□ -2.21
PCM1-219ENST00000523540 FABP2P12104 132 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 CRYGSP22914 178 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 HIST1H2BOP23527 126 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 BRS3P32247 399 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 HIST1H2BBP33778 126 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 ZNF93P35789 620 aaPredicted RBP1.23□□□□□ -2.21
PCM1-219ENST00000523540 HIST1H2BDP58876 126 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 TPPP2P59282 170 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 KRTAP10-4P60372 401 aaPredicted RBP1.23□□□□□ -2.21
PCM1-219ENST00000523540 HIST1H2BCP62807 126 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 PLGLB1Q02325 96 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 HIST2H2BEQ16778 126 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.23□□□□□ -2.21
PCM1-219ENST00000523540 RPL22L1Q6P5R6 122 aaKnown RBP1.23□□□□□ -2.21
PCM1-219ENST00000523540 LCA10Q71F78 164 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 SSX8Q7RTT4 187 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 LINC00305Q7Z4B0 112 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 GKN2Q86XP6 184 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 RPP25LQ8N5L8 163 aaKnown RBP1.23□□□□□ -2.21
PCM1-219ENST00000523540 TEX29Q8N6K0 151 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 H1FXQ92522 213 aaKnown RBP1.23□□□□□ -2.21
PCM1-219ENST00000523540 HIST1H2BHQ93079 126 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 ZC2HC1AQ96GY0 325 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 HIST1H2BNQ99877 126 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 HIST1H2BMQ99879 126 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 GINS4Q9BRT9 223 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 DERL1Q9BUN8 251 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 TMEM133Q9H2Q1 129 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 BANF2Q9H503 90 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 RNF122Q9H9V4 155 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 CCDC167Q9P0B6 97 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 TP73-AS1Q9UF72 201 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 FUT9Q9Y231 359 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 NISCHQ9Y2I1 1504 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 CLIP1P30622 1438 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 MYH13Q9UKX3 1938 aa1.23□□□□□ -2.21
PCM1-219ENST00000523540 SMARCA4P51532 1647 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 KTN1Q86UP2 1357 aaKnown RBP1.22□□□□□ -2.21
PCM1-219ENST00000523540 ZFHX2Q9C0A1 2572 aaPredicted RBP1.22□□□□□ -2.21
PCM1-219ENST00000523540 PSME4Q14997 1843 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 CITO14578 2027 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 TRAV13-1A0A0B4J241 112 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 IGHV1-58A0A0C4DH39 117 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 A0A0G2JMM0 328 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 FAM236AA0A1B0GUQ0 79 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 FAM236BA0A1B0GV22 79 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 A0A1B0GW54 56 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 A0A1W2PPB8 328 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 OR2T8A6NH00 312 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 KIR3DP1A8MWS1 328 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 A8MWV9 139 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 BUB1B-PAK6H3BSN5 160 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 CCDC179H3BU77 68 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 TMEM256-PLSCR3K7ERE1 68 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 M0R378 163 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 CD14P08571 375 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 CXCL1P09341 107 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 LYNX1P0DP58 116 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 S100A4P26447 101 aaKnown RBP1.22□□□□□ -2.21
PCM1-219ENST00000523540 PSMB8P28062 276 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 RPL22P35268 128 aaKnown RBP1.22□□□□□ -2.21
PCM1-219ENST00000523540 SRP14P37108 136 aaKnown RBP1.22□□□□□ -2.21
PCM1-219ENST00000523540 FOXA3P55318 350 aaPredicted RBP1.22□□□□□ -2.21
PCM1-219ENST00000523540 TMEM258P61165 79 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 UBE2BP63146 152 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 BTG2P78543 158 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 DIAPH2-AS1Q14236 149 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 AADACL3Q5VUY0 350 aa1.22□□□□□ -2.21
PCM1-219ENST00000523540 RPS19BP1Q86WX3 136 aaKnown RBP1.22□□□□□ -2.21
PCM1-219ENST00000523540 GPHB5Q86YW7 130 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms