RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 ARL6IP6Q8N6S5 226 aa12.91□□□□□ -0.34
SREK1-212ENST00000522912 ZFP30Q9Y2G7 519 aa12.91□□□□□ -0.34
SREK1-212ENST00000522912 ZNF705FA8MVS1 300 aaPredicted RBP12.91□□□□□ -0.34
SREK1-212ENST00000522912 CHEK1O14757 476 aa12.91□□□□□ -0.34
SREK1-212ENST00000522912 GFI1BQ5VTD9 330 aa12.91□□□□□ -0.34
SREK1-212ENST00000522912 C16orf54Q6UWD8 224 aa12.91□□□□□ -0.34
SREK1-212ENST00000522912 LINC00518Q8N0U6 118 aa12.91□□□□□ -0.34
SREK1-212ENST00000522912 ZC2HC1AQ96GY0 325 aa12.91□□□□□ -0.34
SREK1-212ENST00000522912 DUX5Q96PT3 197 aa12.91□□□□□ -0.34
SREK1-212ENST00000522912 GCN1Q92616 2671 aaKnown RBP12.9□□□□□ -0.34
SREK1-212ENST00000522912 IZUMO1RA6ND01 250 aa12.9□□□□□ -0.34
SREK1-212ENST00000522912 GLMPQ8WWB7 406 aa12.9□□□□□ -0.34
SREK1-212ENST00000522912 NPFFR1Q9GZQ6 430 aa12.9□□□□□ -0.34
SREK1-212ENST00000522912 RPP21Q9H633 154 aaKnown RBP12.9□□□□□ -0.34
SREK1-212ENST00000522912 SERTM2A0A1B0GWG4 89 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 TMEM89A2RUT3 159 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 IFITM10A6NMD0 228 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 KRTAP1-1Q07627 177 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 LCN12Q6JVE5 192 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 TSKUQ8WUA8 353 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 FOXC2Q99958 501 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 UNC79Q9P2D8 2635 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 P01737 135 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 CDX1P47902 265 aaPredicted RBP12.89□□□□□ -0.35
SREK1-212ENST00000522912 FAM209BQ5JX69 171 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 GBGT1Q8N5D6 347 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 RNF182Q8N6D2 247 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 NUP35Q8NFH5 326 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 C8orf49Q96NF6 230 aa12.89□□□□□ -0.35
SREK1-212ENST00000522912 PEF1Q9UBV8 284 aaKnown RBP12.89□□□□□ -0.35
SREK1-212ENST00000522912 TRAV8-2A0A0B4J237 113 aa12.88□□□□□ -0.35
SREK1-212ENST00000522912 NPIPB6E9PJ23 425 aa12.88□□□□□ -0.35
SREK1-212ENST00000522912 MRPL54Q6P161 138 aaKnown RBP12.88□□□□□ -0.35
SREK1-212ENST00000522912 DAZAP1Q96EP5 407 aaKnown RBP12.88□□□□□ -0.35
SREK1-212ENST00000522912 NEU1Q99519 415 aa12.88□□□□□ -0.35
SREK1-212ENST00000522912 VGLL1Q99990 258 aa12.88□□□□□ -0.35
SREK1-212ENST00000522912 RPLP1P05386 114 aaKnown RBP12.88□□□□□ -0.35
SREK1-212ENST00000522912 CRIP1P50238 77 aa12.88□□□□□ -0.35
SREK1-212ENST00000522912 SLC50A1Q9BRV3 221 aa12.88□□□□□ -0.35
SREK1-212ENST00000522912 GNB1LQ9BYB4 327 aa12.88□□□□□ -0.35
SREK1-212ENST00000522912 PRAC2D3DTV9 90 aa12.87□□□□□ -0.35
SREK1-212ENST00000522912 CT83Q5H943 113 aa12.87□□□□□ -0.35
SREK1-212ENST00000522912 C8orf86Q6ZUL3 223 aa12.87□□□□□ -0.35
SREK1-212ENST00000522912 HIST3H2BBQ8N257 126 aa12.87□□□□□ -0.35
SREK1-212ENST00000522912 MRPL18Q9H0U6 180 aaKnown RBP12.87□□□□□ -0.35
SREK1-212ENST00000522912 NAT8BQ9UHF3 227 aa12.87□□□□□ -0.35
SREK1-212ENST00000522912 XKRY2A2RUG3 117 aa12.86□□□□□ -0.35
SREK1-212ENST00000522912 HIGD1CA8MV81 97 aa12.86□□□□□ -0.35
SREK1-212ENST00000522912 SNURFLB1AK76 121 aa12.86□□□□□ -0.35
SREK1-212ENST00000522912 TMEM136Q6ZRR5 245 aa12.86□□□□□ -0.35
SREK1-212ENST00000522912 TCF24Q7RTU0 167 aa12.86□□□□□ -0.35
SREK1-212ENST00000522912 SONP18583 2426 aaKnown RBP12.86□□□□□ -0.35
SREK1-212ENST00000522912 A8MWL6 223 aa12.86□□□□□ -0.35
SREK1-212ENST00000522912 RPL19P84098 196 aaKnown RBP12.86□□□□□ -0.35
SREK1-212ENST00000522912 FOXE3Q13461 319 aa12.86□□□□□ -0.35
SREK1-212ENST00000522912 TM4SF20Q53R12 229 aa12.86□□□□□ -0.35
SREK1-212ENST00000522912 GTSF1Q8WW33 167 aa12.86□□□□□ -0.35
SREK1-212ENST00000522912 GPR61Q9BZJ8 451 aa12.86□□□□□ -0.35
SREK1-212ENST00000522912 AKAP9Q99996 3911 aa12.86□□□□□ -0.35
SREK1-212ENST00000522912 MEOX2P50222 304 aa12.85□□□□□ -0.35
SREK1-212ENST00000522912 PDZD11Q5EBL8 140 aa12.85□□□□□ -0.35
SREK1-212ENST00000522912 COA6Q5JTJ3 125 aaKnown RBP12.85□□□□□ -0.35
SREK1-212ENST00000522912 Q8N2B8 174 aa12.85□□□□□ -0.35
SREK1-212ENST00000522912 TEX29Q8N6K0 151 aa12.85□□□□□ -0.35
SREK1-212ENST00000522912 Q8TAT8 98 aa12.85□□□□□ -0.35
SREK1-212ENST00000522912 MYOZ3Q8TDC0 251 aa12.85□□□□□ -0.35
SREK1-212ENST00000522912 ELANEP08246 267 aa12.84□□□□□ -0.35
SREK1-212ENST00000522912 ERCC8Q13216 396 aa12.84□□□□□ -0.35
SREK1-212ENST00000522912 GPHB5Q86YW7 130 aa12.84□□□□□ -0.35
SREK1-212ENST00000522912 OR4B1Q8NGF8 309 aa12.84□□□□□ -0.35
SREK1-212ENST00000522912 PRR25Q96S07 402 aa12.84□□□□□ -0.35
SREK1-212ENST00000522912 FBLL1A6NHQ2 334 aaKnown RBP12.84□□□□□ -0.35
SREK1-212ENST00000522912 GZMBP10144 247 aa12.84□□□□□ -0.35
SREK1-212ENST00000522912 WDR73Q6P4I2 378 aa12.84□□□□□ -0.35
SREK1-212ENST00000522912 COX8CQ7Z4L0 72 aa12.84□□□□□ -0.35
SREK1-212ENST00000522912 OR2D3Q8NGH3 330 aa12.84□□□□□ -0.35
SREK1-212ENST00000522912 IGHV7-4-1A0A0J9YVY3 117 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 CD5LO43866 347 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 COX19Q49B96 90 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 C12orf57Q99622 126 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 A0A1W2PS18 150 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 S100A8P05109 93 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 EDN2P20800 178 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 RAB4BP61018 213 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 FAM106AQ4KMX7 169 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 SAPCD1Q5SSQ6 148 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 GDF5OSQ5U4N7 250 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 TMEM86BQ8N661 226 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 RNF152Q8N8N0 203 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 WIPF2Q8TF74 440 aaPredicted RBP12.83□□□□□ -0.36
SREK1-212ENST00000522912 GFRA4Q9GZZ7 299 aa12.83□□□□□ -0.36
SREK1-212ENST00000522912 DAZ1Q9NQZ3 744 aaKnown RBP12.83□□□□□ -0.36
SREK1-212ENST00000522912 ACANP16112 2415 aa12.82□□□□□ -0.36
SREK1-212ENST00000522912 MT-ND6P03923 174 aa12.82□□□□□ -0.36
SREK1-212ENST00000522912 MRPL53Q96EL3 112 aaKnown RBP12.82□□□□□ -0.36
SREK1-212ENST00000522912 PGLYRP4Q96LB8 373 aa12.82□□□□□ -0.36
SREK1-212ENST00000522912 C16orf92Q96LL3 132 aa12.82□□□□□ -0.36
SREK1-212ENST00000522912 RHPN1-AS1Q9BWJ2 59 aa12.82□□□□□ -0.36
SREK1-212ENST00000522912 A0A1B0GUS0 222 aa12.81□□□□□ -0.36
SREK1-212ENST00000522912 RBAKDNA6NC62 111 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms