RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 FAUP35544 74 aaKnown RBP4.31□□□□□ -1.72
PABPC1-220ENST00000522658 VBP1P61758 197 aa4.31□□□□□ -1.72
PABPC1-220ENST00000522658 NCS1P62166 190 aa4.31□□□□□ -1.72
PABPC1-220ENST00000522658 IL18Q14116 193 aa4.31□□□□□ -1.72
PABPC1-220ENST00000522658 LCN15Q6UWW0 184 aa4.31□□□□□ -1.72
PABPC1-220ENST00000522658 AMTNQ6UX39 209 aa4.31□□□□□ -1.72
PABPC1-220ENST00000522658 ZNF680Q8NEM1 530 aa4.31□□□□□ -1.72
PABPC1-220ENST00000522658 OR8A1Q8NGG7 326 aa4.31□□□□□ -1.72
PABPC1-220ENST00000522658 TMEM170AQ8WVE7 144 aa4.31□□□□□ -1.72
PABPC1-220ENST00000522658 PCNPQ8WW12 178 aaKnown RBP4.31□□□□□ -1.72
PABPC1-220ENST00000522658 RPUSD4Q96CM3 377 aaKnown RBP4.31□□□□□ -1.72
PABPC1-220ENST00000522658 SLC50A1Q9BRV3 221 aa4.31□□□□□ -1.72
PABPC1-220ENST00000522658 ICOSQ9Y6W8 199 aa4.31□□□□□ -1.72
PABPC1-220ENST00000522658 IGKV1D-37A0A075B6S9 117 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 DUXBA0A1W2PPF3 345 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 H3BNG1 76 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 H3BRN7 92 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 CRXO43186 299 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-220ENST00000522658 HYPMO75409 117 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 ATP6V1G2O95670 118 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 LINC00869P0C866 280 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 CXCL2P19875 107 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 LEPP41159 167 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 PSG3Q16557 428 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 SPANXN5Q5MJ07 72 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 CYP2G1PQ6ZSU1 146 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 ACOT7LQ6ZUV0 252 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 LYZL2Q7Z4W2 148 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 TMED4Q7Z7H5 227 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 LYPD1Q8N2G4 141 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 THAP8Q8NA92 274 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 OR51S1Q8NGJ8 323 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 RNASE8Q8TDE3 154 aaKnown RBP4.3□□□□□ -1.72
PABPC1-220ENST00000522658 YIPF6Q96EC8 236 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 RTBDNQ9BSG5 229 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-220ENST00000522658 RABL2AQ9UBK7 228 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-220ENST00000522658 MGAT4CQ9UBM8 478 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 RABL2BQ9UNT1 228 aa4.3□□□□□ -1.72
PABPC1-220ENST00000522658 STRAPQ9Y3F4 350 aaKnown RBP4.3□□□□□ -1.72
PABPC1-220ENST00000522658 TRGV1A0A0A0MS02 117 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 H3BP45 60 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 COX7A2P2O60397 106 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 NXPH4O95158 308 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 EVI2AP22794 236 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 GATA2P23769 480 aaPredicted RBP4.29□□□□□ -1.72
PABPC1-220ENST00000522658 SELENOTP62341 195 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 ESRGQ1W209 222 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 BPIFA4PQ86YQ2 179 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 SMIM4Q8WVI0 70 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 C17orf77Q96MU5 243 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 ARPC5LQ9BPX5 153 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 PYGO2Q9BRQ0 406 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 SHANK2-AS3Q9BTD1 123 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 FUNDC2Q9BWH2 189 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 GPR132Q9UNW8 380 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 LY96Q9Y6Y9 160 aa4.29□□□□□ -1.72
PABPC1-220ENST00000522658 LRP1BQ9NZR2 4599 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 A0A087X0K7 114 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 IGLV5-52A0A0A0MRZ9 124 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 PLAC8L1A1L4L8 177 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 SYNGR2O43760 224 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 NOL3O60936 208 aaKnown RBP4.28□□□□□ -1.72
PABPC1-220ENST00000522658 SMR3BP02814 79 aaPredicted RBP4.28□□□□□ -1.72
PABPC1-220ENST00000522658 CXCL3P19876 107 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 AP3S2P59780 193 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 RRAS2P62070 204 aaPredicted RBP4.28□□□□□ -1.72
PABPC1-220ENST00000522658 SLAQ13239 276 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 ZNF546Q86UE3 836 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 C10orf126Q8N4M7 172 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 CHAC2Q8WUX2 184 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 DIRAS2Q96HU8 199 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 ARL6Q9H0F7 186 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 PXMP4Q9Y6I8 212 aa4.28□□□□□ -1.72
PABPC1-220ENST00000522658 IGKV1OR2-108A0A075B7D4 117 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 A0A096LPF7 62 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 TRAV8-2A0A0B4J237 113 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 TRAV12-3A0A0B4J271 114 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 TRGV4A0A0C4DH28 118 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 PMS2P5A8MQ11 134 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 F5H697 171 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 GOSR2O14653 212 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 TRIAP1O43715 76 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 IGHV3-53P01767 116 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 DNAH10OSP0CZ25 163 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 SLC25A6P12236 298 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 SRIP30626 198 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 MRPL23Q16540 153 aaKnown RBP4.27□□□□□ -1.73
PABPC1-220ENST00000522658 PXDC1Q5TGL8 231 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 GFI1BQ5VTD9 330 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 Q6ZTI0 123 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 ARV1Q9H2C2 271 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 PSENENQ9NZ42 101 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 MSRB1Q9NZV6 116 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 RSL24D1Q9UHA3 163 aaKnown RBP4.27□□□□□ -1.73
PABPC1-220ENST00000522658 FUT9Q9Y231 359 aa4.27□□□□□ -1.73
PABPC1-220ENST00000522658 DMBT1Q9UGM3 2413 aaPredicted RBP4.27□□□□□ -1.73
PABPC1-220ENST00000522658 A0A087WTM6 91 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 TRAV5A0A0B4J249 113 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 K7EP13 123 aa4.26□□□□□ -1.73
PABPC1-220ENST00000522658 SSSCA1O60232 199 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms