RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 RHOBP62745 196 aa12.82□□□□□ -0.36
CLK4-211ENST00000522556 SCGB1C1Q8TD33 95 aa12.82□□□□□ -0.36
CLK4-211ENST00000522556 FXYD5Q96DB9 178 aa12.82□□□□□ -0.36
CLK4-211ENST00000522556 KCNIP2Q9NS61 270 aa12.82□□□□□ -0.36
CLK4-211ENST00000522556 FUT9Q9Y231 359 aa12.82□□□□□ -0.36
CLK4-211ENST00000522556 FXYD6-FXYD2A0A087WZ82 144 aa12.81□□□□□ -0.36
CLK4-211ENST00000522556 RAB2AP61019 212 aa12.81□□□□□ -0.36
CLK4-211ENST00000522556 Q6ZTC4 211 aa12.81□□□□□ -0.36
CLK4-211ENST00000522556 OR2T35Q8NGX2 323 aa12.81□□□□□ -0.36
CLK4-211ENST00000522556 PHYHIPLQ96FC7 376 aa12.81□□□□□ -0.36
CLK4-211ENST00000522556 NEU1Q99519 415 aa12.81□□□□□ -0.36
CLK4-211ENST00000522556 MRPL32Q9BYC8 188 aaKnown RBP12.81□□□□□ -0.36
CLK4-211ENST00000522556 ALMS1Q8TCU4 4167 aa12.81□□□□□ -0.36
CLK4-211ENST00000522556 GUK1Q16774 197 aa12.8□□□□□ -0.36
CLK4-211ENST00000522556 OR51M1Q9H341 326 aa12.8□□□□□ -0.36
CLK4-211ENST00000522556 PLA2G2EQ9NZK7 142 aa12.8□□□□□ -0.36
CLK4-211ENST00000522556 GOLT1BQ9Y3E0 138 aa12.8□□□□□ -0.36
CLK4-211ENST00000522556 ZNF705GA8MUZ8 300 aaPredicted RBP12.79□□□□□ -0.36
CLK4-211ENST00000522556 ZNF253O75346 499 aa12.79□□□□□ -0.36
CLK4-211ENST00000522556 INSP01308 110 aa12.79□□□□□ -0.36
CLK4-211ENST00000522556 ERCC8Q13216 396 aa12.79□□□□□ -0.36
CLK4-211ENST00000522556 C12orf74Q32Q52 190 aa12.79□□□□□ -0.36
CLK4-211ENST00000522556 HSD17B11Q8NBQ5 300 aa12.79□□□□□ -0.36
CLK4-211ENST00000522556 PAXXQ9BUH6 204 aa12.79□□□□□ -0.36
CLK4-211ENST00000522556 SH3BGRL3Q9H299 93 aa12.79□□□□□ -0.36
CLK4-211ENST00000522556 TIMM9Q9Y5J7 89 aa12.79□□□□□ -0.36
CLK4-211ENST00000522556 J3KRW8 73 aa12.78□□□□□ -0.36
CLK4-211ENST00000522556 OR7C2O60412 319 aa12.78□□□□□ -0.36
CLK4-211ENST00000522556 CT45A10P0DMU9 189 aa12.78□□□□□ -0.36
CLK4-211ENST00000522556 ICAM4Q14773 271 aa12.78□□□□□ -0.36
CLK4-211ENST00000522556 RPP25LQ8N5L8 163 aaKnown RBP12.78□□□□□ -0.36
CLK4-211ENST00000522556 TNFSF18Q9UNG2 199 aa12.78□□□□□ -0.36
CLK4-211ENST00000522556 DNAH1Q9P2D7 4330 aa12.77□□□□□ -0.37
CLK4-211ENST00000522556 IGKV2-40A0A087WW87 121 aaPredicted RBP12.77□□□□□ -0.37
CLK4-211ENST00000522556 LOC102723971A0A1B0GUV8 181 aa12.77□□□□□ -0.37
CLK4-211ENST00000522556 NPIPB6E9PJ23 425 aa12.77□□□□□ -0.37
CLK4-211ENST00000522556 HMGB3O15347 200 aaKnown RBP12.77□□□□□ -0.37
CLK4-211ENST00000522556 IGKV2D-40P01614 121 aaPredicted RBP12.77□□□□□ -0.37
CLK4-211ENST00000522556 HBE1P02100 147 aa12.77□□□□□ -0.37
CLK4-211ENST00000522556 NBEAP1P0C6P0 100 aa12.77□□□□□ -0.37
CLK4-211ENST00000522556 AZU1P20160 251 aa12.77□□□□□ -0.37
CLK4-211ENST00000522556 FAM122CQ6P4D5 195 aa12.77□□□□□ -0.37
CLK4-211ENST00000522556 OR10J6PQ8NGY7 276 aa12.77□□□□□ -0.37
CLK4-211ENST00000522556 RNF141Q8WVD5 230 aa12.77□□□□□ -0.37
CLK4-211ENST00000522556 TMEM208Q9BTX3 173 aa12.77□□□□□ -0.37
CLK4-211ENST00000522556 HYDINQ4G0P3 5121 aa12.77□□□□□ -0.37
CLK4-211ENST00000522556 SMIM9A6NGZ8 99 aa12.76□□□□□ -0.37
CLK4-211ENST00000522556 AMBPP02760 352 aa12.76□□□□□ -0.37
CLK4-211ENST00000522556 ATP6V0CP27449 155 aa12.76□□□□□ -0.37
CLK4-211ENST00000522556 UBE2L3P68036 154 aaKnown RBP12.76□□□□□ -0.37
CLK4-211ENST00000522556 PDE6HQ13956 83 aa12.76□□□□□ -0.37
CLK4-211ENST00000522556 GFI1BQ5VTD9 330 aa12.76□□□□□ -0.37
CLK4-211ENST00000522556 RPL7L1Q6DKI1 246 aaKnown RBP12.76□□□□□ -0.37
CLK4-211ENST00000522556 ASB13Q8WXK3 278 aa12.76□□□□□ -0.37
CLK4-211ENST00000522556 PPP1R14DQ9NXH3 145 aa12.76□□□□□ -0.37
CLK4-211ENST00000522556 YTHDF2Q9Y5A9 579 aaKnown RBP12.76□□□□□ -0.37
CLK4-211ENST00000522556 CDKN1BP46527 198 aa12.75□□□□□ -0.37
CLK4-211ENST00000522556 RRN3P1Q2M238 152 aa12.75□□□□□ -0.37
CLK4-211ENST00000522556 FAM222AQ5U5X8 452 aa12.75□□□□□ -0.37
CLK4-211ENST00000522556 LINC00476Q8WZB0 136 aa12.75□□□□□ -0.37
CLK4-211ENST00000522556 MRPL53Q96EL3 112 aaKnown RBP12.75□□□□□ -0.37
CLK4-211ENST00000522556 DKK2Q9UBU2 259 aa12.75□□□□□ -0.37
CLK4-211ENST00000522556 PLAC8L1A1L4L8 177 aa12.74□□□□□ -0.37
CLK4-211ENST00000522556 JTBO76095 146 aa12.74□□□□□ -0.37
CLK4-211ENST00000522556 M6PRP20645 277 aa12.74□□□□□ -0.37
CLK4-211ENST00000522556 ZNF266Q14584 549 aa12.74□□□□□ -0.37
CLK4-211ENST00000522556 ACOT6Q3I5F7 207 aaPredicted RBP12.74□□□□□ -0.37
CLK4-211ENST00000522556 KHDC3LQ587J8 217 aa12.74□□□□□ -0.37
CLK4-211ENST00000522556 VGLL1Q99990 258 aa12.74□□□□□ -0.37
CLK4-211ENST00000522556 AGPAT4-IT1Q9H0P7 198 aa12.74□□□□□ -0.37
CLK4-211ENST00000522556 KLK5Q9Y337 293 aaPredicted RBP12.74□□□□□ -0.37
CLK4-211ENST00000522556 ARPC5O15511 151 aa12.73□□□□□ -0.37
CLK4-211ENST00000522556 RANP62826 216 aaKnown RBP12.73□□□□□ -0.37
CLK4-211ENST00000522556 SSX7Q7RTT5 188 aa12.73□□□□□ -0.37
CLK4-211ENST00000522556 INO80EQ8NBZ0 244 aaPredicted RBP12.73□□□□□ -0.37
CLK4-211ENST00000522556 OR10G4Q8NGN3 311 aa12.73□□□□□ -0.37
CLK4-211ENST00000522556 OR10G9Q8NGN4 311 aa12.73□□□□□ -0.37
CLK4-211ENST00000522556 OR10G7Q8NGN6 311 aa12.73□□□□□ -0.37
CLK4-211ENST00000522556 LINC01587Q99440 93 aa12.73□□□□□ -0.37
CLK4-211ENST00000522556 Q9H3A6 140 aa12.73□□□□□ -0.37
CLK4-211ENST00000522556 HTN1P15515 57 aa12.72□□□□□ -0.37
CLK4-211ENST00000522556 PRR9Q5T870 116 aa12.72□□□□□ -0.37
CLK4-211ENST00000522556 Q6ZQT7 251 aa12.72□□□□□ -0.37
CLK4-211ENST00000522556 OR2G3Q8NGZ4 309 aa12.72□□□□□ -0.37
CLK4-211ENST00000522556 Q8TAT8 98 aa12.72□□□□□ -0.37
CLK4-211ENST00000522556 PSMG3Q9BT73 122 aaPredicted RBP12.72□□□□□ -0.37
CLK4-211ENST00000522556 AAMDCQ9H7C9 122 aa12.72□□□□□ -0.37
CLK4-211ENST00000522556 PRELID1Q9Y255 219 aa12.72□□□□□ -0.37
CLK4-211ENST00000522556 TRAV10A0A0B4J240 114 aa12.71□□□□□ -0.37
CLK4-211ENST00000522556 TMEM189A5PLL7 270 aa12.71□□□□□ -0.37
CLK4-211ENST00000522556 IGLL5B9A064 214 aa12.71□□□□□ -0.37
CLK4-211ENST00000522556 LY6G6CO95867 125 aa12.71□□□□□ -0.37
CLK4-211ENST00000522556 SPART-AS1P0CW21 52 aa12.71□□□□□ -0.37
CLK4-211ENST00000522556 OR11H4Q8NGC9 324 aa12.71□□□□□ -0.37
CLK4-211ENST00000522556 C2CD4CQ8TF44 421 aa12.71□□□□□ -0.37
CLK4-211ENST00000522556 FAM19A4Q96LR4 140 aa12.71□□□□□ -0.37
CLK4-211ENST00000522556 ODF3Q96PU9 254 aa12.71□□□□□ -0.37
CLK4-211ENST00000522556 TRAV12-3A0A0B4J271 114 aa12.7□□□□□ -0.38
CLK4-211ENST00000522556 ARL14EPLP0DKL9 152 aa12.7□□□□□ -0.38
CLK4-211ENST00000522556 CDC34P49427 236 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms