RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 LINC00311Q8N616 119 aa13.07□□□□□ -0.32
USP42-207ENST00000521713 TRBV20-1A0A075B6N2 111 aa13.07□□□□□ -0.32
USP42-207ENST00000521713 RUSC1-AS1Q66K80 236 aa13.07□□□□□ -0.32
USP42-207ENST00000521713 C2orf82Q6UX34 121 aa13.07□□□□□ -0.32
USP42-207ENST00000521713 KAAG1Q9UBP8 84 aa13.07□□□□□ -0.32
USP42-207ENST00000521713 IGKV1-16P04430 117 aa13.06□□□□□ -0.32
USP42-207ENST00000521713 CD33P20138 364 aa13.06□□□□□ -0.32
USP42-207ENST00000521713 RSPO3Q9BXY4 272 aaPredicted RBP13.06□□□□□ -0.32
USP42-207ENST00000521713 CD300EQ496F6 205 aaPredicted RBP13.06□□□□□ -0.32
USP42-207ENST00000521713 SLC25A20O43772 301 aa13.06□□□□□ -0.32
USP42-207ENST00000521713 DKK1O94907 266 aa13.06□□□□□ -0.32
USP42-207ENST00000521713 TOMM40O96008 361 aa13.06□□□□□ -0.32
USP42-207ENST00000521713 RPL15P61313 204 aaKnown RBP13.06□□□□□ -0.32
USP42-207ENST00000521713 DMRTC2Q8IXT2 367 aaPredicted RBP13.06□□□□□ -0.32
USP42-207ENST00000521713 MAPK1IP1LQ8NDC0 245 aa13.06□□□□□ -0.32
USP42-207ENST00000521713 SPRY4Q9C004 299 aa13.06□□□□□ -0.32
USP42-207ENST00000521713 PGPEP1Q9NXJ5 209 aa13.06□□□□□ -0.32
USP42-207ENST00000521713 HEATR5AQ86XA9 2040 aa13.06□□□□□ -0.32
USP42-207ENST00000521713 RNASE2P10153 161 aaKnown RBP13.05□□□□□ -0.32
USP42-207ENST00000521713 KLF12Q9Y4X4 402 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 TRGV4A0A0C4DH28 118 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 ZC2HC1BQ5TFG8 222 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 C18orf32Q8TCD1 76 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 SCRT1Q9BWW7 348 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 C1QTNF4Q9BXJ3 329 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 SPANXCQ9NY87 97 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 DOCK9Q9BZ29 2069 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 CACNA1AO00555 2505 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 TNFRSF6BO95407 300 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 ZNF492Q9P255 531 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 K7EP34 96 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 EVI2AP22794 236 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 RSPO1Q2MKA7 263 aaPredicted RBP13.05□□□□□ -0.32
USP42-207ENST00000521713 TEX43Q6ZNM6 134 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 WDR86Q86TI4 376 aa13.05□□□□□ -0.32
USP42-207ENST00000521713 FAM110DQ8TAY7 271 aaPredicted RBP13.05□□□□□ -0.32
USP42-207ENST00000521713 TRAV12-3A0A0B4J271 114 aa13.04□□□□□ -0.32
USP42-207ENST00000521713 K7EP13 123 aa13.04□□□□□ -0.32
USP42-207ENST00000521713 ZNF688P0C7X2 276 aa13.04□□□□□ -0.32
USP42-207ENST00000521713 LYZL1Q6UWQ5 148 aa13.04□□□□□ -0.32
USP42-207ENST00000521713 LHFPL4Q7Z7J7 247 aa13.04□□□□□ -0.32
USP42-207ENST00000521713 DAZ1Q9NQZ3 744 aaKnown RBP13.04□□□□□ -0.32
USP42-207ENST00000521713 LRRK1Q38SD2 2015 aa13.04□□□□□ -0.32
USP42-207ENST00000521713 CD28P10747 220 aa13.04□□□□□ -0.32
USP42-207ENST00000521713 CDKN1BP46527 198 aa13.04□□□□□ -0.32
USP42-207ENST00000521713 RFNGQ9Y644 331 aa13.04□□□□□ -0.32
USP42-207ENST00000521713 PIEZO1Q92508 2521 aa13.04□□□□□ -0.32
USP42-207ENST00000521713 IGKV1-6A0A0C4DH72 117 aa13.03□□□□□ -0.32
USP42-207ENST00000521713 C15orf62A8K5M9 175 aa13.03□□□□□ -0.32
USP42-207ENST00000521713 DTX2Q86UW9 622 aa13.03□□□□□ -0.32
USP42-207ENST00000521713 RHPN1-AS1Q9BWJ2 59 aa13.03□□□□□ -0.32
USP42-207ENST00000521713 HELZP42694 1942 aaKnown RBP13.03□□□□□ -0.32
USP42-207ENST00000521713 NOTCH3Q9UM47 2321 aa13.03□□□□□ -0.32
USP42-207ENST00000521713 PPDPFLQ8WWR9 84 aa13.03□□□□□ -0.32
USP42-207ENST00000521713 LINC00477Q96M19 166 aa13.03□□□□□ -0.32
USP42-207ENST00000521713 C1orf147Q96MC9 270 aaPredicted RBP13.03□□□□□ -0.32
USP42-207ENST00000521713 ATP6V0BQ99437 205 aa13.03□□□□□ -0.32
USP42-207ENST00000521713 ZNF138P52744 262 aa13.02□□□□□ -0.32
USP42-207ENST00000521713 LINC00205P59089 165 aa13.02□□□□□ -0.32
USP42-207ENST00000521713 ZNF833PQ6ZTB9 187 aa13.02□□□□□ -0.32
USP42-207ENST00000521713 SHISA9B4DS77 424 aa13.02□□□□□ -0.32
USP42-207ENST00000521713 Q6ZWC4 215 aa13.02□□□□□ -0.32
USP42-207ENST00000521713 ZNF48Q96MX3 618 aaPredicted RBP13.02□□□□□ -0.32
USP42-207ENST00000521713 TP53BP1Q12888 1972 aaPredicted RBP13.02□□□□□ -0.33
USP42-207ENST00000521713 A0A1W2PPI3 338 aa13.02□□□□□ -0.33
USP42-207ENST00000521713 DOCK10Q96BY6 2186 aa13.02□□□□□ -0.33
USP42-207ENST00000521713 ATP6V0E1O15342 81 aa13.01□□□□□ -0.33
USP42-207ENST00000521713 C17orf58Q2M2W7 97 aa13.01□□□□□ -0.33
USP42-207ENST00000521713 CFAP161Q6P656 301 aa13.01□□□□□ -0.33
USP42-207ENST00000521713 C1orf122Q6ZSJ8 110 aa13.01□□□□□ -0.33
USP42-207ENST00000521713 LIME1Q9H400 295 aa13.01□□□□□ -0.33
USP42-207ENST00000521713 TOMM7Q9P0U1 55 aa13.01□□□□□ -0.33
USP42-207ENST00000521713 OVOL3O00110 214 aa13.01□□□□□ -0.33
USP42-207ENST00000521713 MALRD1Q5VYJ5 2156 aa13.01□□□□□ -0.33
USP42-207ENST00000521713 MYLKQ15746 1914 aa13.01□□□□□ -0.33
USP42-207ENST00000521713 COX8AP10176 69 aa13.01□□□□□ -0.33
USP42-207ENST00000521713 FAM231DQ6ZW35 169 aa13.01□□□□□ -0.33
USP42-207ENST00000521713 TMEM86BQ8N661 226 aa13.01□□□□□ -0.33
USP42-207ENST00000521713 NPIPB5A8MRT5 1133 aa13□□□□□ -0.33
USP42-207ENST00000521713 NCR2O95944 276 aa13□□□□□ -0.33
USP42-207ENST00000521713 NDPQ00604 133 aa13□□□□□ -0.33
USP42-207ENST00000521713 COA6Q5JTJ3 125 aaKnown RBP13□□□□□ -0.33
USP42-207ENST00000521713 DPH3P1Q9H4G8 78 aa13□□□□□ -0.33
USP42-207ENST00000521713 DKK4Q9UBT3 224 aa13□□□□□ -0.33
USP42-207ENST00000521713 TSSC4Q9Y5U2 329 aaPredicted RBP13□□□□□ -0.33
USP42-207ENST00000521713 IGLV3-1P01715 115 aa13□□□□□ -0.33
USP42-207ENST00000521713 NEGR1Q7Z3B1 354 aa13□□□□□ -0.33
USP42-207ENST00000521713 IGHV1-24A0A0C4DH33 117 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 SYNJ2BPP57105 145 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 TAL2Q16559 108 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 DEFB121Q5J5C9 76 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 Q6ZRM9 215 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 LTBP2Q14767 1821 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 VCYO14598 125 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 SIVA1O15304 175 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 SLAQ13239 276 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 EXOC3-AS1Q8N2X6 119 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 TMEM158Q8WZ71 300 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 KIR2DL5BA0A0G2JN68 375 aa12.99□□□□□ -0.33
USP42-207ENST00000521713 KIR2DL5BA0A0G2JPC4 375 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms