RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 BTF3P20290 206 aaKnown RBP7.56□□□□□ -1.2
CSMD1-210ENST00000521646 KRTAP10-1P60331 282 aa7.56□□□□□ -1.2
CSMD1-210ENST00000521646 RAB11AP62491 216 aa7.56□□□□□ -1.2
CSMD1-210ENST00000521646 RHOBP62745 196 aa7.56□□□□□ -1.2
CSMD1-210ENST00000521646 HAMPP81172 84 aa7.56□□□□□ -1.2
CSMD1-210ENST00000521646 AKR1C1Q04828 323 aa7.56□□□□□ -1.2
CSMD1-210ENST00000521646 SLC38A11Q08AI6 406 aa7.56□□□□□ -1.2
CSMD1-210ENST00000521646 Q6ZTI0 123 aa7.56□□□□□ -1.2
CSMD1-210ENST00000521646 TMEM263Q8WUH6 116 aaKnown RBP7.56□□□□□ -1.2
CSMD1-210ENST00000521646 RPUSD4Q96CM3 377 aaKnown RBP7.56□□□□□ -1.2
CSMD1-210ENST00000521646 GNPNAT1Q96EK6 184 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-210ENST00000521646 ZNF331Q9NQX6 463 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-210ENST00000521646 C11orf21Q9P2W6 132 aa7.56□□□□□ -1.2
CSMD1-210ENST00000521646 SCP2D1Q9UJQ7 156 aa7.56□□□□□ -1.2
CSMD1-210ENST00000521646 MRPS16Q9Y3D3 137 aaKnown RBP7.56□□□□□ -1.2
CSMD1-210ENST00000521646 V9GYH0 126 aa7.56□□□□□ -1.2
CSMD1-210ENST00000521646 LRP1Q07954 4544 aaKnown RBP7.55□□□□□ -1.2
CSMD1-210ENST00000521646 DUXBA0A1W2PPF3 345 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 H3BQ15 152 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 J3KRW8 73 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 CT45A10P0DMU9 189 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 M6PRP20645 277 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 CDKN1BP46527 198 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 RRAS2P62070 204 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-210ENST00000521646 SRPXP78539 464 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 CLINT1Q14677 625 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 TMEM128Q5BJH2 165 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 SAMD13Q5VXD3 122 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 LYPD1Q8N2G4 141 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 C11orf72Q8NBR9 251 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 GPR82Q96P67 336 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 CCDC59Q9P031 241 aaKnown RBP7.55□□□□□ -1.2
CSMD1-210ENST00000521646 CACFD1Q9UGQ2 172 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 HIGD1AQ9Y241 93 aa7.55□□□□□ -1.2
CSMD1-210ENST00000521646 HYPMO75409 117 aa7.54□□□□□ -1.2
CSMD1-210ENST00000521646 IL5P05113 134 aa7.54□□□□□ -1.2
CSMD1-210ENST00000521646 OR5G3P0C626 314 aa7.54□□□□□ -1.2
CSMD1-210ENST00000521646 B2MP61769 119 aa7.54□□□□□ -1.2
CSMD1-210ENST00000521646 TMEM256Q8N2U0 113 aa7.54□□□□□ -1.2
CSMD1-210ENST00000521646 TMEM37Q8WXS4 190 aa7.54□□□□□ -1.2
CSMD1-210ENST00000521646 TRAV5A0A0B4J249 113 aa7.53□□□□□ -1.2
CSMD1-210ENST00000521646 SMCO3A2RU48 225 aa7.53□□□□□ -1.2
CSMD1-210ENST00000521646 EPM2AB3EWF7 344 aa7.53□□□□□ -1.2
CSMD1-210ENST00000521646 CFDP00746 253 aaPredicted RBP7.53□□□□□ -1.2
CSMD1-210ENST00000521646 METTL15P1P0C7V9 234 aa7.53□□□□□ -1.2
CSMD1-210ENST00000521646 IGLC2P0DOY2 106 aa7.53□□□□□ -1.2
CSMD1-210ENST00000521646 RPL7P18124 248 aaKnown RBP7.53□□□□□ -1.2
CSMD1-210ENST00000521646 TMEM14EPQ6UXP3 125 aa7.53□□□□□ -1.2
CSMD1-210ENST00000521646 ZNF431Q8TF32 576 aaPredicted RBP7.53□□□□□ -1.2
CSMD1-210ENST00000521646 SAT2Q96F10 170 aaPredicted RBP7.53□□□□□ -1.2
CSMD1-210ENST00000521646 ARL6Q9H0F7 186 aa7.53□□□□□ -1.2
CSMD1-210ENST00000521646 ARV1Q9H2C2 271 aa7.53□□□□□ -1.2
CSMD1-210ENST00000521646 MDFICQ9P1T7 246 aa7.53□□□□□ -1.2
CSMD1-210ENST00000521646 FLVCR2Q9UPI3 526 aa7.53□□□□□ -1.2
CSMD1-210ENST00000521646 RCL1Q9Y2P8 373 aaKnown RBP7.53□□□□□ -1.2
CSMD1-210ENST00000521646 STRAPQ9Y3F4 350 aaKnown RBP7.53□□□□□ -1.2
CSMD1-210ENST00000521646 UBR4Q5T4S7 5183 aa7.53□□□□□ -1.2
CSMD1-210ENST00000521646 TRAV12-3A0A0B4J271 114 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 FABP12A6NFH5 140 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 H3BMQ9 156 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 H7BYZ3 331 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 K7EPK0 472 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 SSSCA1O60232 199 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 INAFM2P0DMQ5 153 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 ANXA3P12429 323 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 OPCMLQ14982 345 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 PRR9Q5T870 116 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 Q5VSD8 79 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 ZNF493Q6ZR52 646 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 SCGB3A2Q96PL1 93 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 CIB3Q96Q77 187 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-210ENST00000521646 MGST2Q99735 147 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 PSENENQ9NZ42 101 aa7.52□□□□□ -1.21
CSMD1-210ENST00000521646 RSL24D1Q9UHA3 163 aaKnown RBP7.52□□□□□ -1.21
CSMD1-210ENST00000521646 A0A1W2PPQ1 181 aa7.51□□□□□ -1.21
CSMD1-210ENST00000521646 MED6O75586 246 aa7.51□□□□□ -1.21
CSMD1-210ENST00000521646 SMR3BP02814 79 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-210ENST00000521646 UBE2MP61081 183 aaKnown RBP7.51□□□□□ -1.21
CSMD1-210ENST00000521646 RAP2BP61225 183 aa7.51□□□□□ -1.21
CSMD1-210ENST00000521646 CD300CQ08708 224 aa7.51□□□□□ -1.21
CSMD1-210ENST00000521646 ERCC8Q13216 396 aa7.51□□□□□ -1.21
CSMD1-210ENST00000521646 TTC32Q5I0X7 151 aa7.51□□□□□ -1.21
CSMD1-210ENST00000521646 MRPS26Q9BYN8 205 aaKnown RBP7.51□□□□□ -1.21
CSMD1-210ENST00000521646 GSN-AS1Q9NRJ2 163 aa7.51□□□□□ -1.21
CSMD1-210ENST00000521646 TP53TG3Q9ULZ0 132 aa7.51□□□□□ -1.21
CSMD1-210ENST00000521646 KLF12Q9Y4X4 402 aa7.51□□□□□ -1.21
CSMD1-210ENST00000521646 C9orf170A2RU37 121 aa7.5□□□□□ -1.21
CSMD1-210ENST00000521646 H3BNG1 76 aa7.5□□□□□ -1.21
CSMD1-210ENST00000521646 M0R3E3 92 aa7.5□□□□□ -1.21
CSMD1-210ENST00000521646 ZNF324O75467 553 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-210ENST00000521646 BTCP35070 178 aa7.5□□□□□ -1.21
CSMD1-210ENST00000521646 LINC00305Q7Z4B0 112 aa7.5□□□□□ -1.21
CSMD1-210ENST00000521646 CCDC190Q86UF4 302 aa7.5□□□□□ -1.21
CSMD1-210ENST00000521646 SMIM8Q96KF7 97 aa7.5□□□□□ -1.21
CSMD1-210ENST00000521646 FAM19A4Q96LR4 140 aa7.5□□□□□ -1.21
CSMD1-210ENST00000521646 FAT3Q8TDW7 4589 aa7.49□□□□□ -1.21
CSMD1-210ENST00000521646 AGPAT2O15120 278 aa7.49□□□□□ -1.21
CSMD1-210ENST00000521646 NXPH4O95158 308 aa7.49□□□□□ -1.21
CSMD1-210ENST00000521646 NDUFB4O95168 129 aa7.49□□□□□ -1.21
CSMD1-210ENST00000521646 RLN2P04090 185 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms