RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 KNCNA6PVL3 124 aa12.83□□□□□ -0.36
TRAM1-203ENST00000520700 H2AFB1P0C5Y9 115 aa12.83□□□□□ -0.36
TRAM1-203ENST00000520700 ACTL10Q5JWF8 245 aa12.83□□□□□ -0.36
TRAM1-203ENST00000520700 STHQ8IWL8 128 aa12.83□□□□□ -0.36
TRAM1-203ENST00000520700 ZNF738Q8NE65 137 aa12.83□□□□□ -0.36
TRAM1-203ENST00000520700 RPUSD4Q96CM3 377 aaKnown RBP12.83□□□□□ -0.36
TRAM1-203ENST00000520700 OTORQ9NRC9 128 aa12.83□□□□□ -0.36
TRAM1-203ENST00000520700 A0A1W2PRE2 83 aa12.82□□□□□ -0.36
TRAM1-203ENST00000520700 DUSP14O95147 198 aaKnown RBP12.82□□□□□ -0.36
TRAM1-203ENST00000520700 RANP62826 216 aaKnown RBP12.82□□□□□ -0.36
TRAM1-203ENST00000520700 Q9H3A6 140 aa12.82□□□□□ -0.36
TRAM1-203ENST00000520700 UBE2CO00762 179 aa12.81□□□□□ -0.36
TRAM1-203ENST00000520700 APOC4P55056 127 aa12.81□□□□□ -0.36
TRAM1-203ENST00000520700 ICAM4Q14773 271 aa12.81□□□□□ -0.36
TRAM1-203ENST00000520700 GDF5OSQ5U4N7 250 aa12.81□□□□□ -0.36
TRAM1-203ENST00000520700 MORN3Q6PF18 240 aaPredicted RBP12.81□□□□□ -0.36
TRAM1-203ENST00000520700 EXOC3-AS1Q8N2X6 119 aa12.81□□□□□ -0.36
TRAM1-203ENST00000520700 OR8A1Q8NGG7 326 aa12.81□□□□□ -0.36
TRAM1-203ENST00000520700 RXFP4Q8TDU9 374 aa12.81□□□□□ -0.36
TRAM1-203ENST00000520700 SFT2D1Q8WV19 159 aa12.81□□□□□ -0.36
TRAM1-203ENST00000520700 ARL2-SNX15V9GYD0 113 aa12.81□□□□□ -0.36
TRAM1-203ENST00000520700 DNAH9Q9NYC9 4486 aa12.81□□□□□ -0.36
TRAM1-203ENST00000520700 PRKDCP78527 4128 aaKnown RBP12.8□□□□□ -0.36
TRAM1-203ENST00000520700 ZNF705FA8MVS1 300 aaPredicted RBP12.8□□□□□ -0.36
TRAM1-203ENST00000520700 F6UB75 175 aa12.8□□□□□ -0.36
TRAM1-203ENST00000520700 DEFB1P60022 68 aa12.8□□□□□ -0.36
TRAM1-203ENST00000520700 PMS2P11Q13670 270 aa12.8□□□□□ -0.36
TRAM1-203ENST00000520700 HAGHQ16775 308 aa12.8□□□□□ -0.36
TRAM1-203ENST00000520700 FAM74A1Q5RGS3 127 aa12.8□□□□□ -0.36
TRAM1-203ENST00000520700 ALKAL2Q6UX46 152 aa12.8□□□□□ -0.36
TRAM1-203ENST00000520700 NKX6-2Q9C056 277 aaPredicted RBP12.8□□□□□ -0.36
TRAM1-203ENST00000520700 CSTL1Q9H114 145 aa12.8□□□□□ -0.36
TRAM1-203ENST00000520700 PGPA6NDG6 321 aa12.79□□□□□ -0.36
TRAM1-203ENST00000520700 PRAC2D3DTV9 90 aa12.79□□□□□ -0.36
TRAM1-203ENST00000520700 M0R3E3 92 aa12.79□□□□□ -0.36
TRAM1-203ENST00000520700 FGF8P55075 233 aaPredicted RBP12.79□□□□□ -0.36
TRAM1-203ENST00000520700 SBSPONQ8IVN8 264 aa12.79□□□□□ -0.36
TRAM1-203ENST00000520700 TMPRSS5Q9H3S3 457 aa12.79□□□□□ -0.36
TRAM1-203ENST00000520700 AGRNO00468 2067 aa12.78□□□□□ -0.36
TRAM1-203ENST00000520700 RBAKDNA6NC62 111 aa12.78□□□□□ -0.36
TRAM1-203ENST00000520700 TEX46H3BTG2 121 aa12.78□□□□□ -0.36
TRAM1-203ENST00000520700 HBE1P02100 147 aa12.78□□□□□ -0.36
TRAM1-203ENST00000520700 NHLRC4P0CG21 123 aaPredicted RBP12.78□□□□□ -0.36
TRAM1-203ENST00000520700 RPL35AP18077 110 aaKnown RBP12.78□□□□□ -0.36
TRAM1-203ENST00000520700 CSN1S1P47710 185 aa12.78□□□□□ -0.36
TRAM1-203ENST00000520700 PPT1P50897 306 aa12.78□□□□□ -0.36
TRAM1-203ENST00000520700 CNN1P51911 297 aaKnown RBP12.78□□□□□ -0.36
TRAM1-203ENST00000520700 NUTF2P61970 127 aaKnown RBP12.78□□□□□ -0.36
TRAM1-203ENST00000520700 BLOC1S1P78537 153 aa12.78□□□□□ -0.36
TRAM1-203ENST00000520700 AMTNQ6UX39 209 aa12.78□□□□□ -0.36
TRAM1-203ENST00000520700 OR10J6PQ8NGY7 276 aa12.78□□□□□ -0.36
TRAM1-203ENST00000520700 NPIPB6E9PJ23 425 aa12.77□□□□□ -0.37
TRAM1-203ENST00000520700 SLC25A5P05141 298 aaKnown RBP12.77□□□□□ -0.37
TRAM1-203ENST00000520700 TEX261Q6UWH6 196 aa12.77□□□□□ -0.37
TRAM1-203ENST00000520700 C9orf47Q6ZRZ4 202 aa12.77□□□□□ -0.37
TRAM1-203ENST00000520700 Q6ZWC4 215 aa12.77□□□□□ -0.37
TRAM1-203ENST00000520700 LINC00477Q96M19 166 aa12.77□□□□□ -0.37
TRAM1-203ENST00000520700 TM2D3Q9BRN9 247 aa12.77□□□□□ -0.37
TRAM1-203ENST00000520700 FAM74A7A6NL05 159 aa12.76□□□□□ -0.37
TRAM1-203ENST00000520700 ZNF705EA8MWA4 302 aaPredicted RBP12.76□□□□□ -0.37
TRAM1-203ENST00000520700 GIG44P09565 113 aaPredicted RBP12.76□□□□□ -0.37
TRAM1-203ENST00000520700 IQCF2Q8IXL9 164 aa12.76□□□□□ -0.37
TRAM1-203ENST00000520700 C5orf17Q8NAS9 161 aa12.76□□□□□ -0.37
TRAM1-203ENST00000520700 OR4B1Q8NGF8 309 aa12.76□□□□□ -0.37
TRAM1-203ENST00000520700 LYPD6BQ8NI32 183 aa12.76□□□□□ -0.37
TRAM1-203ENST00000520700 ODF3Q96PU9 254 aa12.76□□□□□ -0.37
TRAM1-203ENST00000520700 PPP1R14DQ9NXH3 145 aa12.76□□□□□ -0.37
TRAM1-203ENST00000520700 SERTM2A0A1B0GWG4 89 aa12.75□□□□□ -0.37
TRAM1-203ENST00000520700 GGTLC3B5MD39 225 aa12.75□□□□□ -0.37
TRAM1-203ENST00000520700 DIRC3C9JPN6 131 aa12.75□□□□□ -0.37
TRAM1-203ENST00000520700 AMBPP02760 352 aa12.75□□□□□ -0.37
TRAM1-203ENST00000520700 SUMO1P63165 101 aaKnown RBP12.75□□□□□ -0.37
TRAM1-203ENST00000520700 HIST1H1AQ02539 215 aaPredicted RBP12.75□□□□□ -0.37
TRAM1-203ENST00000520700 CMTM2Q8TAZ6 248 aa12.75□□□□□ -0.37
TRAM1-203ENST00000520700 TCEAL7Q9BRU2 100 aa12.75□□□□□ -0.37
TRAM1-203ENST00000520700 C1QTNF4Q9BXJ3 329 aa12.75□□□□□ -0.37
TRAM1-203ENST00000520700 TP53TG1Q9Y2A0 90 aa12.75□□□□□ -0.37
TRAM1-203ENST00000520700 YTHDF2Q9Y5A9 579 aaKnown RBP12.75□□□□□ -0.37
TRAM1-203ENST00000520700 TRBV7-9A0A0J9YWB2 115 aa12.74□□□□□ -0.37
TRAM1-203ENST00000520700 ZNF705DP0CH99 300 aaPredicted RBP12.74□□□□□ -0.37
TRAM1-203ENST00000520700 ZNF705BP0CI00 300 aaPredicted RBP12.74□□□□□ -0.37
TRAM1-203ENST00000520700 CCL20P78556 96 aa12.74□□□□□ -0.37
TRAM1-203ENST00000520700 CCDC28AQ8IWP9 274 aa12.74□□□□□ -0.37
TRAM1-203ENST00000520700 ZNF680Q8NEM1 530 aa12.74□□□□□ -0.37
TRAM1-203ENST00000520700 AGPAT4-IT1Q9H0P7 198 aa12.74□□□□□ -0.37
TRAM1-203ENST00000520700 EPDR1Q9UM22 224 aa12.74□□□□□ -0.37
TRAM1-203ENST00000520700 IFNA7P01567 189 aa12.73□□□□□ -0.37
TRAM1-203ENST00000520700 CSNK1G2-AS1Q8NCQ2 148 aa12.73□□□□□ -0.37
TRAM1-203ENST00000520700 SPATA25Q9BR10 227 aa12.73□□□□□ -0.37
TRAM1-203ENST00000520700 CA1P00915 261 aaPredicted RBP12.72□□□□□ -0.37
TRAM1-203ENST00000520700 TCRAP04437 139 aa12.72□□□□□ -0.37
TRAM1-203ENST00000520700 NMBP08949 121 aa12.72□□□□□ -0.37
TRAM1-203ENST00000520700 CT45A10P0DMU9 189 aa12.72□□□□□ -0.37
TRAM1-203ENST00000520700 UBE2G2P60604 165 aa12.72□□□□□ -0.37
TRAM1-203ENST00000520700 HIST1H2BAQ96A08 127 aa12.72□□□□□ -0.37
TRAM1-203ENST00000520700 RNF183Q96D59 192 aa12.72□□□□□ -0.37
TRAM1-203ENST00000520700 FAM19A4Q96LR4 140 aa12.72□□□□□ -0.37
TRAM1-203ENST00000520700 ASCL2Q99929 193 aa12.72□□□□□ -0.37
TRAM1-203ENST00000520700 TXNDC17Q9BRA2 123 aa12.72□□□□□ -0.37
TRAM1-203ENST00000520700 SLC35B3Q9H1N7 401 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms