RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 SUMO1P63165 101 aaKnown RBP13.2□□□□□ -0.3
SDC2-205ENST00000520233 FOXI2Q6ZQN5 318 aa13.2□□□□□ -0.3
SDC2-205ENST00000520233 ARL6IP6Q8N6S5 226 aa13.2□□□□□ -0.3
SDC2-205ENST00000520233 RXFP4Q8TDU9 374 aa13.2□□□□□ -0.3
SDC2-205ENST00000520233 WFDC10AQ9H1F0 79 aa13.2□□□□□ -0.3
SDC2-205ENST00000520233 AURKAIP1Q9NWT8 199 aaPredicted RBP13.2□□□□□ -0.3
SDC2-205ENST00000520233 CSN1S1P47710 185 aa13.19□□□□□ -0.3
SDC2-205ENST00000520233 ZNF124Q15973 351 aa13.19□□□□□ -0.3
SDC2-205ENST00000520233 DEFB125Q8N687 156 aa13.19□□□□□ -0.3
SDC2-205ENST00000520233 C5orf17Q8NAS9 161 aa13.19□□□□□ -0.3
SDC2-205ENST00000520233 CMTM2Q8TAZ6 248 aa13.19□□□□□ -0.3
SDC2-205ENST00000520233 SAV1Q9H4B6 383 aaPredicted RBP13.19□□□□□ -0.3
SDC2-205ENST00000520233 A0A0J9YX75 114 aa13.18□□□□□ -0.3
SDC2-205ENST00000520233 KNCNA6PVL3 124 aa13.18□□□□□ -0.3
SDC2-205ENST00000520233 RGS13O14921 159 aa13.18□□□□□ -0.3
SDC2-205ENST00000520233 SLC25A5P05141 298 aaKnown RBP13.18□□□□□ -0.3
SDC2-205ENST00000520233 DEFB1P60022 68 aa13.18□□□□□ -0.3
SDC2-205ENST00000520233 CST9LP1Q5W188 147 aa13.18□□□□□ -0.3
SDC2-205ENST00000520233 EBLN2Q6P2I7 272 aa13.18□□□□□ -0.3
SDC2-205ENST00000520233 CITED4Q96RK1 184 aa13.18□□□□□ -0.3
SDC2-205ENST00000520233 CMYA5Q8N3K9 4069 aa13.17□□□□□ -0.3
SDC2-205ENST00000520233 PRAC2D3DTV9 90 aa13.17□□□□□ -0.3
SDC2-205ENST00000520233 F6UB75 175 aa13.17□□□□□ -0.3
SDC2-205ENST00000520233 TAGLN2P37802 199 aaKnown RBP13.17□□□□□ -0.3
SDC2-205ENST00000520233 ATP5G3P48201 142 aa13.17□□□□□ -0.3
SDC2-205ENST00000520233 ACTL10Q5JWF8 245 aa13.17□□□□□ -0.3
SDC2-205ENST00000520233 CLLU1Q5K131 121 aa13.17□□□□□ -0.3
SDC2-205ENST00000520233 CCDC28AQ8IWP9 274 aa13.17□□□□□ -0.3
SDC2-205ENST00000520233 OR8A1Q8NGG7 326 aa13.17□□□□□ -0.3
SDC2-205ENST00000520233 TXNDC17Q9BRA2 123 aa13.17□□□□□ -0.3
SDC2-205ENST00000520233 SRD5A3Q9H8P0 318 aa13.17□□□□□ -0.3
SDC2-205ENST00000520233 EPDR1Q9UM22 224 aa13.17□□□□□ -0.3
SDC2-205ENST00000520233 DIRC3C9JPN6 131 aa13.16□□□□□ -0.3
SDC2-205ENST00000520233 C11orf94C9JXX5 98 aa13.16□□□□□ -0.3
SDC2-205ENST00000520233 PRB2P02812 416 aaPredicted RBP13.16□□□□□ -0.3
SDC2-205ENST00000520233 BCL2P10415 239 aa13.16□□□□□ -0.3
SDC2-205ENST00000520233 HLA-DRB4P13762 266 aa13.16□□□□□ -0.3
SDC2-205ENST00000520233 HAGHQ16775 308 aa13.16□□□□□ -0.3
SDC2-205ENST00000520233 GDF5OSQ5U4N7 250 aa13.16□□□□□ -0.3
SDC2-205ENST00000520233 TCEAL7Q9BRU2 100 aa13.16□□□□□ -0.3
SDC2-205ENST00000520233 HLA-DRB4X5D2U9 266 aa13.16□□□□□ -0.3
SDC2-205ENST00000520233 SORL1Q92673 2214 aa13.16□□□□□ -0.3
SDC2-205ENST00000520233 PKD1L1Q8TDX9 2849 aa13.15□□□□□ -0.3
SDC2-205ENST00000520233 RBAKDNA6NC62 111 aa13.15□□□□□ -0.3
SDC2-205ENST00000520233 A8MZ25 164 aa13.15□□□□□ -0.3
SDC2-205ENST00000520233 H3BMM0 161 aa13.15□□□□□ -0.3
SDC2-205ENST00000520233 DUSP14O95147 198 aaKnown RBP13.15□□□□□ -0.3
SDC2-205ENST00000520233 TCRAP04437 139 aa13.15□□□□□ -0.3
SDC2-205ENST00000520233 PRB4P10163 310 aaPredicted RBP13.15□□□□□ -0.3
SDC2-205ENST00000520233 GNG5P63218 68 aa13.15□□□□□ -0.3
SDC2-205ENST00000520233 STHQ8IWL8 128 aa13.15□□□□□ -0.3
SDC2-205ENST00000520233 OR10J6PQ8NGY7 276 aa13.15□□□□□ -0.3
SDC2-205ENST00000520233 VAX2Q9UIW0 290 aa13.15□□□□□ -0.3
SDC2-205ENST00000520233 RPH3ALQ9UNE2 315 aa13.15□□□□□ -0.3
SDC2-205ENST00000520233 LOC102723971A0A1B0GUV8 181 aa13.14□□□□□ -0.31
SDC2-205ENST00000520233 SERTM2A0A1B0GWG4 89 aa13.14□□□□□ -0.31
SDC2-205ENST00000520233 RBFOX3A6NFN3 312 aa13.14□□□□□ -0.31
SDC2-205ENST00000520233 NPIPB6E9PJ23 425 aa13.14□□□□□ -0.31
SDC2-205ENST00000520233 K7EIL1 84 aa13.14□□□□□ -0.31
SDC2-205ENST00000520233 ZNF705DP0CH99 300 aaPredicted RBP13.14□□□□□ -0.31
SDC2-205ENST00000520233 ZNF705BP0CI00 300 aaPredicted RBP13.14□□□□□ -0.31
SDC2-205ENST00000520233 IGHV4-30-4P0DP06 118 aa13.14□□□□□ -0.31
SDC2-205ENST00000520233 HIST1H1AQ02539 215 aaPredicted RBP13.14□□□□□ -0.31
SDC2-205ENST00000520233 TRPT1Q86TN4 253 aaKnown RBP13.14□□□□□ -0.31
SDC2-205ENST00000520233 HIST1H2BAQ96A08 127 aa13.14□□□□□ -0.31
SDC2-205ENST00000520233 FAM210AQ96ND0 272 aa13.14□□□□□ -0.31
SDC2-205ENST00000520233 CLUHP3Q96NS8 147 aa13.14□□□□□ -0.31
SDC2-205ENST00000520233 TUBA4BQ9H853 241 aa13.14□□□□□ -0.31
SDC2-205ENST00000520233 IGKV2-40A0A087WW87 121 aaPredicted RBP13.13□□□□□ -0.31
SDC2-205ENST00000520233 A8MTW9 85 aa13.13□□□□□ -0.31
SDC2-205ENST00000520233 F6UZH7 168 aa13.13□□□□□ -0.31
SDC2-205ENST00000520233 IGKV2D-40P01614 121 aaPredicted RBP13.13□□□□□ -0.31
SDC2-205ENST00000520233 CNN1P51911 297 aaKnown RBP13.13□□□□□ -0.31
SDC2-205ENST00000520233 MEF2BQ02080 365 aaPredicted RBP13.13□□□□□ -0.31
SDC2-205ENST00000520233 GOLT1AQ6ZVE7 132 aa13.13□□□□□ -0.31
SDC2-205ENST00000520233 ATG101Q9BSB4 218 aa13.13□□□□□ -0.31
SDC2-205ENST00000520233 K7EQM0 130 aa13.12□□□□□ -0.31
SDC2-205ENST00000520233 PEX7O00628 323 aa13.12□□□□□ -0.31
SDC2-205ENST00000520233 ZNF506Q5JVG8 444 aa13.12□□□□□ -0.31
SDC2-205ENST00000520233 C9orf47Q6ZRZ4 202 aa13.12□□□□□ -0.31
SDC2-205ENST00000520233 CYB561D1Q8N8Q1 229 aa13.12□□□□□ -0.31
SDC2-205ENST00000520233 OR4B1Q8NGF8 309 aa13.12□□□□□ -0.31
SDC2-205ENST00000520233 LINC00477Q96M19 166 aa13.12□□□□□ -0.31
SDC2-205ENST00000520233 RARRES2Q99969 163 aa13.12□□□□□ -0.31
SDC2-205ENST00000520233 FBN3Q75N90 2809 aa13.12□□□□□ -0.31
SDC2-205ENST00000520233 PDE6DO43924 150 aa13.11□□□□□ -0.31
SDC2-205ENST00000520233 ERCC8Q13216 396 aa13.11□□□□□ -0.31
SDC2-205ENST00000520233 TOR2AQ5JU69 321 aa13.11□□□□□ -0.31
SDC2-205ENST00000520233 LINC00322Q6ZN03 302 aaPredicted RBP13.11□□□□□ -0.31
SDC2-205ENST00000520233 VGLL1Q99990 258 aa13.11□□□□□ -0.31
SDC2-205ENST00000520233 EIF5A2Q9GZV4 153 aaKnown RBP13.11□□□□□ -0.31
SDC2-205ENST00000520233 AGPAT4-IT1Q9H0P7 198 aa13.11□□□□□ -0.31
SDC2-205ENST00000520233 LOC102724200A0A096LPH7 203 aaPredicted RBP13.1□□□□□ -0.31
SDC2-205ENST00000520233 RBMY1BA6NDE4 496 aaKnown RBP13.1□□□□□ -0.31
SDC2-205ENST00000520233 RBMY1EA6NEQ0 496 aaKnown RBP13.1□□□□□ -0.31
SDC2-205ENST00000520233 IGKV3-20P01619 116 aa13.1□□□□□ -0.31
SDC2-205ENST00000520233 RBMY1DP0C7P1 496 aaKnown RBP13.1□□□□□ -0.31
SDC2-205ENST00000520233 TMEM78Q5T7P6 136 aa13.1□□□□□ -0.31
SDC2-205ENST00000520233 MGAM2Q2M2H8 2515 aa13.09□□□□□ -0.31
SDC2-205ENST00000520233 SCO2A0A1W2PP80 73 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms