RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	POLR2G	P62487	172 aa	Known RBP eCLIP	5	□□□□□ -1.61
SDCBP-208	ENST00000520228	GAMT	Q14353	236 aa		5	□□□□□ -1.61
SDCBP-208	ENST00000520228	ZNF506	Q5JVG8	444 aa		5	□□□□□ -1.61
SDCBP-208	ENST00000520228	LEMD1	Q68G75	181 aa		5	□□□□□ -1.61
SDCBP-208	ENST00000520228	SBSPON	Q8IVN8	264 aa		5	□□□□□ -1.61
SDCBP-208	ENST00000520228	C12orf45	Q8N5I9	185 aa	Predicted RBP	5	□□□□□ -1.61
SDCBP-208	ENST00000520228	DEFB125	Q8N687	156 aa		5	□□□□□ -1.61
SDCBP-208	ENST00000520228	NARS2	Q96I59	477 aa	Known RBP	5	□□□□□ -1.61
SDCBP-208	ENST00000520228	SLC35E1	Q96K37	410 aa		5	□□□□□ -1.61
SDCBP-208	ENST00000520228	METTL26	Q96S19	204 aa		5	□□□□□ -1.61
SDCBP-208	ENST00000520228	RNF2	Q99496	336 aa		5	□□□□□ -1.61
SDCBP-208	ENST00000520228	PSENEN	Q9NZ42	101 aa		5	□□□□□ -1.61
SDCBP-208	ENST00000520228	STRAP	Q9Y3F4	350 aa	Known RBP	5	□□□□□ -1.61
SDCBP-208	ENST00000520228	IGHV3-66	A0A0C4DH42	116 aa		4.99	□□□□□ -1.61
SDCBP-208	ENST00000520228	TEX48	A0A1B0GUV7	120 aa		4.99	□□□□□ -1.61
SDCBP-208	ENST00000520228	OR4C46	A6NHA9	309 aa		4.99	□□□□□ -1.61
SDCBP-208	ENST00000520228	ZFP92	A6NM28	416 aa		4.99	□□□□□ -1.61
SDCBP-208	ENST00000520228		H3BP45	60 aa		4.99	□□□□□ -1.61
SDCBP-208	ENST00000520228	CD5	P06127	495 aa		4.99	□□□□□ -1.61
SDCBP-208	ENST00000520228	FABP1	P07148	127 aa		4.99	□□□□□ -1.61
SDCBP-208	ENST00000520228	CRYBB3	P26998	211 aa		4.99	□□□□□ -1.61
SDCBP-208	ENST00000520228	HIGD2B	Q4VC39	106 aa		4.99	□□□□□ -1.61
SDCBP-208	ENST00000520228	SMIM8	Q96KF7	97 aa		4.99	□□□□□ -1.61
SDCBP-208	ENST00000520228	TMEM231	Q9H6L2	316 aa		4.99	□□□□□ -1.61
SDCBP-208	ENST00000520228	VSIR	Q9H7M9	311 aa		4.99	□□□□□ -1.61
SDCBP-208	ENST00000520228	TENM3	Q9P273	2699 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	IGKV3-7	A0A075B6H7	116 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	SNRPGP15	A8MWD9	76 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	INMT-MINDY4	F8WBC2	141 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228		L7N2F9	121 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	IL4	P05112	153 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	TFPI2	P48307	235 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	TAS2R30	P59541	319 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	PAFAH1B2	P68402	229 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	LCE3C	Q5T5A8	94 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	OR8G2P	Q6IF36	304 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	TCF24	Q7RTU0	167 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	C2orf50	Q96LR7	162 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	WFDC10A	Q9H1F0	79 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228		U3KQK5	164 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	STAB2	Q8WWQ8	2551 aa		4.98	□□□□□ -1.61
SDCBP-208	ENST00000520228	IGKV1D-37	A0A075B6S9	117 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	SMCO3	A2RU48	225 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	C7orf66	A4D0T2	115 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	RBMY1B	A6NDE4	496 aa	Known RBP	4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	RBMY1E	A6NEQ0	496 aa	Known RBP	4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	DNASE2	O00115	360 aa	Predicted RBP	4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	TSC22D2	O75157	780 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	RBMY1D	P0C7P1	496 aa	Known RBP	4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	METTL15P1	P0C7V9	234 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	P2RY1	P47900	373 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	EIF2B2	P49770	351 aa	Known RBP	4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	CNN1	P51911	297 aa	Known RBP	4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	CMC4	P56277	68 aa	Predicted RBP	4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	ZNF90	Q03938	601 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	AKR1C1	Q04828	323 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	OR2F1	Q13607	317 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	USF2	Q15853	346 aa	Predicted RBP	4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	HAGH	Q16775	308 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	TMEM14EP	Q6UXP3	125 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	ACOT7L	Q6ZUV0	252 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	OR10P1	Q8NGE3	313 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	OR51G1	Q8NGK1	321 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	TRGV9	Q99603	122 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	MARVELD1	Q9BSK0	173 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	PBDC1	Q9BVG4	233 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	MS4A6A	Q9H2W1	248 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228		Q9HAA7	133 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	RABAC1	Q9UI14	185 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	RCL1	Q9Y2P8	373 aa	Known RBP	4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	LSM5	Q9Y4Y9	91 aa	Known RBP	4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	SORL1	Q92673	2214 aa		4.97	□□□□□ -1.61
SDCBP-208	ENST00000520228	IGKV1OR2-108	A0A075B7D4	117 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	TRAV2	A0A0B4J234	112 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	HELT	A6NFD8	242 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228		K7EPK0	472 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	GOSR2	O14653	212 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	CFD	P00746	253 aa	Predicted RBP	4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	PVALB	P20472	110 aa	Predicted RBP	4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	NUP62	P37198	522 aa	Predicted RBP	4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	BCAP31	P51572	246 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	CAV2	P51636	162 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	AP2S1	P53680	142 aa	Predicted RBP	4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	S100A10	P60903	97 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	LYZ	P61626	148 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	RRAS2	P62070	204 aa	Predicted RBP	4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	TMEM144	Q7Z5S9	345 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	STXBP6	Q8NFX7	210 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	TM2D3	Q9BRN9	247 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	GGTLC1	Q9BX51	225 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	CLEC5A	Q9NY25	188 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	NBEAL2	Q6ZNJ1	2754 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	COL7A1	Q02388	2944 aa		4.96	□□□□□ -1.62
SDCBP-208	ENST00000520228	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.95	□□□□□ -1.62
SDCBP-208	ENST00000520228		A0A1B0GVY2	172 aa		4.95	□□□□□ -1.62
SDCBP-208	ENST00000520228	FNDC10	F2Z333	226 aa		4.95	□□□□□ -1.62
SDCBP-208	ENST00000520228	SSNA1	O43805	119 aa		4.95	□□□□□ -1.62
SDCBP-208	ENST00000520228	DEDD	O75618	318 aa		4.95	□□□□□ -1.62
SDCBP-208	ENST00000520228	CCNK	O75909	580 aa		4.95	□□□□□ -1.62

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