RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 DNAH17Q9UFH2 4485 aa17.84■□□□□ 0.45
VEGFA-220ENST00000519767 H3BQ15 152 aa17.84■□□□□ 0.45
VEGFA-220ENST00000519767 S100A10P60903 97 aa17.84■□□□□ 0.45
VEGFA-220ENST00000519767 FCN2Q15485 313 aa17.84■□□□□ 0.45
VEGFA-220ENST00000519767 SOHLH1Q5JUK2 328 aa17.84■□□□□ 0.45
VEGFA-220ENST00000519767 TMEM252Q8N6L7 170 aa17.84■□□□□ 0.45
VEGFA-220ENST00000519767 SLC39A9Q9NUM3 307 aa17.84■□□□□ 0.45
VEGFA-220ENST00000519767 HERC2O95714 4834 aa17.84■□□□□ 0.45
VEGFA-220ENST00000519767 DNAH2Q9P225 4427 aa17.83■□□□□ 0.45
VEGFA-220ENST00000519767 IGLV2-18A0A075B6J9 118 aa17.83■□□□□ 0.44
VEGFA-220ENST00000519767 A0A1B0GVY2 172 aa17.83■□□□□ 0.44
VEGFA-220ENST00000519767 F5H768 121 aa17.83■□□□□ 0.44
VEGFA-220ENST00000519767 SLC17A3O00476 420 aa17.83■□□□□ 0.44
VEGFA-220ENST00000519767 CCDC28AQ8IWP9 274 aa17.83■□□□□ 0.44
VEGFA-220ENST00000519767 TMEM263Q8WUH6 116 aaKnown RBP17.83■□□□□ 0.44
VEGFA-220ENST00000519767 S100ZQ8WXG8 99 aa17.83■□□□□ 0.44
VEGFA-220ENST00000519767 PRAC2D3DTV9 90 aa17.82■□□□□ 0.44
VEGFA-220ENST00000519767 H3BTX0 84 aa17.82■□□□□ 0.44
VEGFA-220ENST00000519767 ZNF253O75346 499 aa17.82■□□□□ 0.44
VEGFA-220ENST00000519767 BAXQ07812 192 aa17.82■□□□□ 0.44
VEGFA-220ENST00000519767 RAB32Q13637 225 aa17.82■□□□□ 0.44
VEGFA-220ENST00000519767 ATG101Q9BSB4 218 aa17.82■□□□□ 0.44
VEGFA-220ENST00000519767 TRAV5A0A0B4J249 113 aa17.81■□□□□ 0.44
VEGFA-220ENST00000519767 MPDU1O75352 247 aa17.81■□□□□ 0.44
VEGFA-220ENST00000519767 ASAH1Q13510 395 aa17.81■□□□□ 0.44
VEGFA-220ENST00000519767 RNASE8Q8TDE3 154 aaKnown RBP17.81■□□□□ 0.44
VEGFA-220ENST00000519767 ODF3Q96PU9 254 aa17.81■□□□□ 0.44
VEGFA-220ENST00000519767 IGSF23A1L1A6 192 aa17.8■□□□□ 0.44
VEGFA-220ENST00000519767 PRB4P10163 310 aaPredicted RBP17.8■□□□□ 0.44
VEGFA-220ENST00000519767 GPN1Q9HCN4 374 aaPredicted RBP17.8■□□□□ 0.44
VEGFA-220ENST00000519767 NOP10Q9NPE3 64 aaKnown RBP17.8■□□□□ 0.44
VEGFA-220ENST00000519767 FAT2Q9NYQ8 4349 aa17.8■□□□□ 0.44
VEGFA-220ENST00000519767 UBE2L5PA0A1B0GUS4 154 aa17.79■□□□□ 0.44
VEGFA-220ENST00000519767 LEPP41159 167 aa17.79■□□□□ 0.44
VEGFA-220ENST00000519767 ZNF586Q9NXT0 402 aa17.79■□□□□ 0.44
VEGFA-220ENST00000519767 TMEM14CQ9P0S9 112 aa17.79■□□□□ 0.44
VEGFA-220ENST00000519767 NPIPB6E9PJ23 425 aa17.78■□□□□ 0.44
VEGFA-220ENST00000519767 CT45A10P0DMU9 189 aa17.78■□□□□ 0.44
VEGFA-220ENST00000519767 FGF7P21781 194 aa17.78■□□□□ 0.44
VEGFA-220ENST00000519767 KIR3DS1Q14943 382 aa17.78■□□□□ 0.44
VEGFA-220ENST00000519767 GFI1BQ5VTD9 330 aa17.78■□□□□ 0.44
VEGFA-220ENST00000519767 MRPL53Q96EL3 112 aaKnown RBP17.78■□□□□ 0.44
VEGFA-220ENST00000519767 TRBV19A0A075B6N1 114 aa17.77■□□□□ 0.44
VEGFA-220ENST00000519767 NUDT3O95989 172 aa17.77■□□□□ 0.44
VEGFA-220ENST00000519767 RLN2P04090 185 aa17.77■□□□□ 0.44
VEGFA-220ENST00000519767 C1orf134Q5TEV5 83 aa17.77■□□□□ 0.44
VEGFA-220ENST00000519767 PRELID1Q9Y255 219 aa17.77■□□□□ 0.44
VEGFA-220ENST00000519767 HIST1H1EP10412 219 aaKnown RBP17.76■□□□□ 0.43
VEGFA-220ENST00000519767 CCL18P55774 89 aa17.76■□□□□ 0.43
VEGFA-220ENST00000519767 PDE6HQ13956 83 aa17.76■□□□□ 0.43
VEGFA-220ENST00000519767 PARD6GQ9BYG4 376 aaPredicted RBP17.76■□□□□ 0.43
VEGFA-220ENST00000519767 TIMM9Q9Y5J7 89 aa17.76■□□□□ 0.43
VEGFA-220ENST00000519767 SLC25A31Q9H0C2 315 aa17.75■□□□□ 0.43
VEGFA-220ENST00000519767 KIAA1109Q2LD37 5005 aa17.75■□□□□ 0.43
VEGFA-220ENST00000519767 LINC00612Q8N6U2 182 aa17.74■□□□□ 0.43
VEGFA-220ENST00000519767 ENKURQ8TC29 256 aa17.74■□□□□ 0.43
VEGFA-220ENST00000519767 LINC00477Q96M19 166 aa17.74■□□□□ 0.43
VEGFA-220ENST00000519767 PYGO2Q9BRQ0 406 aa17.74■□□□□ 0.43
VEGFA-220ENST00000519767 NPCDR1Q9BY65 106 aa17.74■□□□□ 0.43
VEGFA-220ENST00000519767 TRAV12-3A0A0B4J271 114 aa17.73■□□□□ 0.43
VEGFA-220ENST00000519767 SNURFLB1AK76 121 aa17.73■□□□□ 0.43
VEGFA-220ENST00000519767 SLC25A5P05141 298 aaKnown RBP17.73■□□□□ 0.43
VEGFA-220ENST00000519767 CYCSP99999 105 aaKnown RBP17.73■□□□□ 0.43
VEGFA-220ENST00000519767 E5RGE8 158 aa17.72■□□□□ 0.43
VEGFA-220ENST00000519767 NMES1Q9C002 83 aa17.72■□□□□ 0.43
VEGFA-220ENST00000519767 PKHD1P08F94 4074 aa17.71■□□□□ 0.43
VEGFA-220ENST00000519767 PRAF2O60831 178 aa17.71■□□□□ 0.43
VEGFA-220ENST00000519767 NDUFB4O95168 129 aa17.71■□□□□ 0.43
VEGFA-220ENST00000519767 MED14OSP0DP75 135 aa17.71■□□□□ 0.43
VEGFA-220ENST00000519767 NHLH2Q02577 135 aa17.71■□□□□ 0.43
VEGFA-220ENST00000519767 CLINT1Q14677 625 aa17.71■□□□□ 0.43
VEGFA-220ENST00000519767 OR5C1Q8NGR4 320 aa17.71■□□□□ 0.43
VEGFA-220ENST00000519767 ZNRF2Q8NHG8 242 aa17.71■□□□□ 0.43
VEGFA-220ENST00000519767 RNF141Q8WVD5 230 aa17.71■□□□□ 0.43
VEGFA-220ENST00000519767 J3KRW8 73 aa17.7■□□□□ 0.42
VEGFA-220ENST00000519767 UPK1BO75841 260 aa17.7■□□□□ 0.42
VEGFA-220ENST00000519767 DAZ2Q13117 558 aaKnown RBP17.7■□□□□ 0.42
VEGFA-220ENST00000519767 OR5I1Q13606 314 aa17.7■□□□□ 0.42
VEGFA-220ENST00000519767 ZNF503Q96F45 646 aa17.7■□□□□ 0.42
VEGFA-220ENST00000519767 AAMDCQ9H7C9 122 aa17.7■□□□□ 0.42
VEGFA-220ENST00000519767 NACAE9PAV3 2078 aa17.69■□□□□ 0.42
VEGFA-220ENST00000519767 NBDYA0A0U1RRE5 68 aa17.69■□□□□ 0.42
VEGFA-220ENST00000519767 M0R3E3 92 aa17.69■□□□□ 0.42
VEGFA-220ENST00000519767 M6PRP20645 277 aa17.69■□□□□ 0.42
VEGFA-220ENST00000519767 GNPNAT1Q96EK6 184 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-220ENST00000519767 KCNIP2Q9NS61 270 aa17.69■□□□□ 0.42
VEGFA-220ENST00000519767 PKD1P98161 4303 aa17.69■□□□□ 0.42
VEGFA-220ENST00000519767 GAGE12BA1L429 117 aa17.68■□□□□ 0.42
VEGFA-220ENST00000519767 GAGE7O76087 117 aa17.68■□□□□ 0.42
VEGFA-220ENST00000519767 SIX6O95475 246 aa17.68■□□□□ 0.42
VEGFA-220ENST00000519767 NMBP08949 121 aa17.68■□□□□ 0.42
VEGFA-220ENST00000519767 GAGE12FP0CL80 117 aa17.68■□□□□ 0.42
VEGFA-220ENST00000519767 GAGE12GP0CL81 117 aa17.68■□□□□ 0.42
VEGFA-220ENST00000519767 GAGE12IP0CL82 117 aa17.68■□□□□ 0.42
VEGFA-220ENST00000519767 PYYP10082 97 aa17.68■□□□□ 0.42
VEGFA-220ENST00000519767 GCSAMLQ5JQS6 135 aa17.68■□□□□ 0.42
VEGFA-220ENST00000519767 THAP6Q8TBB0 222 aa17.68■□□□□ 0.42
VEGFA-220ENST00000519767 RXFP4Q8TDU9 374 aa17.68■□□□□ 0.42
VEGFA-220ENST00000519767 BLNKQ8WV28 456 aa17.68■□□□□ 0.42
VEGFA-220ENST00000519767 LINC00467Q9BRT7 94 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms