RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 SCGB1D1O95968 90 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 FAM162BQ5T6X4 162 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 GDF5OSQ5U4N7 250 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 Q6AWC8 147 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 SIGLECL1Q8N7X8 197 aa6.51□□□□□ -1.37
HMGB4-203ENST00000519684 SSBP4Q9BWG4 385 aaPredicted RBP6.51□□□□□ -1.37
HMGB4-203ENST00000519684 A0A0G2JLM5 398 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 F2Z2F3 143 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 TSTD3H0UI37 97 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 LINC00310P59036 64 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 LOXL1Q08397 574 aaPredicted RBP6.5□□□□□ -1.37
HMGB4-203ENST00000519684 RIGQ13278 110 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 LCN12Q6JVE5 192 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 ACACBO00763 2458 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 AKAP6Q13023 2319 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 CACNA1BQ00975 2339 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 IGHV3OR16-13A0A075B7E8 117 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 A0A096LNT2 108 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 IGHV3-49A0A0A0MS15 119 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 IGHV3-74A0A0B4J1X5 117 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 TMEM189A5PLL7 270 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 A8MWP6 167 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 LINC00587B1AMM8 73 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 RNF223E7ERA6 249 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 HAX1O00165 279 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 NDUFA4O00483 81 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 SH2D1AO60880 128 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 HLA-DMBP28068 263 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 PPIFP30405 207 aaKnown RBP6.5□□□□□ -1.37
HMGB4-203ENST00000519684 BMI1P35226 326 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 PKIAP61925 76 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 BLCAPP62952 87 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 DEFB112Q30KQ8 113 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 IGFL4Q6B9Z1 124 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 Q71RC1 249 aaPredicted RBP6.5□□□□□ -1.37
HMGB4-203ENST00000519684 PRR25Q96S07 402 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 PRDM13Q9H4Q3 707 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 PPP1R14DQ9NXH3 145 aa6.5□□□□□ -1.37
HMGB4-203ENST00000519684 ABCA1O95477 2261 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.49□□□□□ -1.37
HMGB4-203ENST00000519684 A0A1B0GUT8 65 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 A0A1B0GW15 77 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 RBAKDNA6NC62 111 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 ZNF705FA8MVS1 300 aaPredicted RBP6.49□□□□□ -1.37
HMGB4-203ENST00000519684 APOHP02749 345 aaPredicted RBP6.49□□□□□ -1.37
HMGB4-203ENST00000519684 FOXA3P55318 350 aaPredicted RBP6.49□□□□□ -1.37
HMGB4-203ENST00000519684 KLF5Q13887 457 aaPredicted RBP6.49□□□□□ -1.37
HMGB4-203ENST00000519684 DEFB113Q30KQ7 82 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 C18orf32Q8TCD1 76 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 VGLL1Q99990 258 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 U3KQE9 123 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 MED13LQ71F56 2210 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 IGHV3-11P01762 117 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 IGHV4-59P01825 116 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 PMCHP20382 165 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 AMTP48728 403 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 CRIP1P50238 77 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 RPS20P60866 119 aaKnown RBP6.49□□□□□ -1.37
HMGB4-203ENST00000519684 COX8CQ7Z4L0 72 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 LRRC75A-AS1Q8N1F1 130 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 RNF182Q8N6D2 247 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 MAPK1IP1LQ8NDC0 245 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 OR4X2Q8NGF9 303 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 Q8TAT8 98 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 MRPL53Q96EL3 112 aaKnown RBP6.49□□□□□ -1.37
HMGB4-203ENST00000519684 ALKBH7Q9BT30 221 aaPredicted RBP6.49□□□□□ -1.37
HMGB4-203ENST00000519684 TPPP3Q9BW30 176 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 CLEC5AQ9NY25 188 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 NAGKQ9UJ70 344 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 USP24Q9UPU5 2620 aa6.49□□□□□ -1.37
HMGB4-203ENST00000519684 A0A1W2PS18 150 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 IGHG4P01861 327 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 GPX1P07203 203 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 ZNF705DP0CH99 300 aaPredicted RBP6.48□□□□□ -1.37
HMGB4-203ENST00000519684 ZNF705BP0CI00 300 aaPredicted RBP6.48□□□□□ -1.37
HMGB4-203ENST00000519684 Q5PR19 223 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 C8orf86Q6ZUL3 223 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 RCHY1Q96PM5 261 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 ZNF580Q9UK33 172 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 ZNF324O75467 553 aaPredicted RBP6.48□□□□□ -1.37
HMGB4-203ENST00000519684 IGLV1-40P01703 118 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 TRBV12-3P01733 135 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 IGHV4-31P0DP07 118 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 FAM209BQ5JX69 171 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 Q6ZWC4 215 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 C16orf92Q96LL3 132 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 PRO1933Q9H354 126 aa6.48□□□□□ -1.37
HMGB4-203ENST00000519684 TMSB15BA0A087X1C1 80 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 HSBP1O75506 76 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 ARMS2P0C7Q2 107 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 KRTAP10-9P60411 292 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 ERCC8Q13216 396 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 TM4SF20Q53R12 229 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 TMEM78Q5T7P6 136 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 RNASEKQ6P5S7 137 aaKnown RBP6.47□□□□□ -1.37
HMGB4-203ENST00000519684 Q6ZS46 218 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 C9orf139Q6ZV77 190 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 GLMPQ8WWB7 406 aa6.47□□□□□ -1.37
HMGB4-203ENST00000519684 NPFFR1Q9GZQ6 430 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms