RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 C5orf58C9J3I9 102 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 C17orf112F2Z3M2 114 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 IGLV1-51P01701 117 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 PAEPP09466 180 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 MRPS36P82909 103 aaKnown RBP1.41□□□□□ -2.18
PTPN12-213ENST00000519553 ZNF846Q147U1 533 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 TMEM244Q5VVB8 128 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 FP248Q71RG6 208 aaPredicted RBP1.41□□□□□ -2.18
PTPN12-213ENST00000519553 OR4B1Q8NGF8 309 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 OR5H6Q8NGV6 325 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 OR4K15Q8NH41 348 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 OR4C6Q8NH72 309 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 BRK1Q8WUW1 75 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 CHCHD1Q96BP2 118 aaKnown RBP1.41□□□□□ -2.18
PTPN12-213ENST00000519553 SLC50A1Q9BRV3 221 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 LY96Q9Y6Y9 160 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 WDR7Q9Y4E6 1490 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 GLI3P10071 1580 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 POLEQ07864 2286 aa1.41□□□□□ -2.18
PTPN12-213ENST00000519553 DISP2A7MBM2 1401 aa1.4□□□□□ -2.18
PTPN12-213ENST00000519553 PRG4Q92954 1404 aaPredicted RBP1.4□□□□□ -2.18
PTPN12-213ENST00000519553 DIDO1Q9BTC0 2240 aaKnown RBP1.4□□□□□ -2.18
PTPN12-213ENST00000519553 A0A087WSZ3 146 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 ZNF727A8MUV8 499 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 UQCRQO14949 82 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 PROSCO94903 275 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 UBL3O95164 117 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 NCR2O95944 276 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 MT-ND4LP03901 98 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 MGST1P10620 155 aaKnown RBP1.4□□□□□ -2.19
PTPN12-213ENST00000519553 CRYGSP22914 178 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 KDELR1P24390 212 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 FOXA3P55318 350 aaPredicted RBP1.4□□□□□ -2.19
PTPN12-213ENST00000519553 DNAJB13P59910 316 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 RPL13AP3Q6NVV1 102 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 LINC00471Q8N535 108 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 TEX29Q8N6K0 151 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 Q8N814 137 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 LINC00301Q8NCQ3 95 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 CGREF1Q99674 301 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 ERG28Q9UKR5 140 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 SOX21Q9Y651 276 aaPredicted RBP1.4□□□□□ -2.19
PTPN12-213ENST00000519553 KDM6AO15550 1401 aaPredicted RBP1.4□□□□□ -2.19
PTPN12-213ENST00000519553 CCDC171Q6TFL3 1326 aa1.4□□□□□ -2.19
PTPN12-213ENST00000519553 MEIKINA0A087WXM9 373 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 TRAV3A0A0B4J244 114 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 TRAV12-1A0A0B4J245 112 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 TRAV1-1A0A0B4J248 108 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 IGKV3D-7A0A0C4DH55 119 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 IGKV3OR2-268A0A0C4DH90 116 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 B4DSR2 109 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 E7EUB6 86 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 F8W036 122 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 M0R2Z0 102 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 LYRM1O43325 122 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 TPST1O60507 370 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 MT-ND6P03923 174 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 ASAH2BP0C7U1 165 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 SAA1P0DJI8 122 aaPredicted RBP1.39□□□□□ -2.19
PTPN12-213ENST00000519553 CCL4P13236 92 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 FABP4P15090 132 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 SSR2P43308 183 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 DSCR4P56555 118 aaPredicted RBP1.39□□□□□ -2.19
PTPN12-213ENST00000519553 MAXP61244 160 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 PDE6HQ13956 83 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 CDK5R1Q15078 307 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 Q1T7F1 81 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 HAGHLQ6PII5 290 aaPredicted RBP1.39□□□□□ -2.19
PTPN12-213ENST00000519553 POP5Q969H6 163 aaKnown RBP1.39□□□□□ -2.19
PTPN12-213ENST00000519553 HYLS1Q96M11 299 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 VPS25Q9BRG1 176 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 SMIM3Q9BZL3 60 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 NIT2Q9NQR4 276 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 CALML5Q9NZT1 146 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 BAZ2BQ9UIF8 2168 aaKnown RBP1.39□□□□□ -2.19
PTPN12-213ENST00000519553 HEATR5BQ9P2D3 2071 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 DLC1Q96QB1 1528 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 COL4A5P29400 1685 aa1.39□□□□□ -2.19
PTPN12-213ENST00000519553 RP1P56715 2156 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 BRWD1Q9NSI6 2320 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 MYO5AQ9Y4I1 1855 aaKnown RBP1.38□□□□□ -2.19
PTPN12-213ENST00000519553 IGKV2D-26A0A0A0MRZ7 120 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 OR2T8A6NH00 312 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 HBDP02042 147 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 TCRAP04437 139 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 SLC25A5P05141 298 aaKnown RBP1.38□□□□□ -2.19
PTPN12-213ENST00000519553 IGLC6P0CF74 106 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 TPT1P13693 172 aaKnown RBP1.38□□□□□ -2.19
PTPN12-213ENST00000519553 AKR1D1P51857 326 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 NCS1P62166 190 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 LSM3P62310 102 aaKnown RBP1.38□□□□□ -2.19
PTPN12-213ENST00000519553 SELENOWP63302 87 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 ELOBQ15370 118 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 HSD17B12Q53GQ0 312 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 RNASE10Q5GAN6 216 aaKnown RBP1.38□□□□□ -2.19
PTPN12-213ENST00000519553 TMEM91Q6ZNR0 172 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 MMGT1Q8N4V1 131 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 TSTD1Q8NFU3 115 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 OR5D14Q8NGL3 314 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 OR10AC1Q8NH08 325 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms