RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 MPV17P39210 176 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 NMUP48645 174 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 CCL11P51671 97 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 B3GALT5-AS1P59052 145 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 GAGE2BQ13066 116 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 MRPL23Q16540 153 aaKnown RBP2.73□□□□□ -1.97
CSMD3-209ENST00000519485 LPAL2Q16609 132 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 GAGE2EQ4V326 116 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 TTC32Q5I0X7 151 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 KLF17Q5JT82 389 aaPredicted RBP2.73□□□□□ -1.97
CSMD3-209ENST00000519485 FAM120AOSQ5T036 256 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 GAGE2AQ6NT46 116 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 Q6Q795 121 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 ZNF841Q6ZN19 808 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 C16orf47Q6ZP98 133 aaPredicted RBP2.73□□□□□ -1.97
CSMD3-209ENST00000519485 C2orf91Q6ZV80 131 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 Q6ZVH6 145 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 ZCCHC24Q8N2G6 241 aaKnown RBP2.73□□□□□ -1.97
CSMD3-209ENST00000519485 TMEM75Q8N9X5 138 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 OR8A1Q8NGG7 326 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 ST6GALNAC6Q969X2 333 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 RAB37Q96AX2 223 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 IMMP1LQ96LU5 166 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 PRELID3AQ96N28 172 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 HIST1H4GQ99525 98 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 TRGV9Q99603 122 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 ASCL2Q99929 193 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 CITED2Q99967 270 aaPredicted RBP2.73□□□□□ -1.97
CSMD3-209ENST00000519485 CHAC1Q9BUX1 264 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 HINT2Q9BX68 163 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 TMEM126AQ9H061 195 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 GAGE2DQ9UEU5 116 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 PILRBQ9UKJ0 227 aa2.73□□□□□ -1.97
CSMD3-209ENST00000519485 ARID1AO14497 2285 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 A0A1W2PNU3 283 aaPredicted RBP2.72□□□□□ -1.97
CSMD3-209ENST00000519485 LINC01546A6NGU7 62 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 A8MWV9 139 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 A8MZ25 164 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 IGLL5B9A064 214 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 C15orf65H3BRN8 121 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 K7EM74 188 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 TIMM8AO60220 97 aaPredicted RBP2.72□□□□□ -1.97
CSMD3-209ENST00000519485 SNCGO76070 127 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 PPP1R17O96001 155 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 MOSP00540 346 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 TCRAP04437 139 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 CRYGCP07315 174 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 CCL3P10147 92 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 FGF6P10767 208 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 ACP1P24666 158 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 CKS2P33552 79 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 MYCNOSP40205 109 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 MEF2CQ06413 473 aaPredicted RBP2.72□□□□□ -1.97
CSMD3-209ENST00000519485 PDE6HQ13956 83 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 RRN3P1Q2M238 152 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 VMA21Q3ZAQ7 101 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 SPINK9Q5DT21 86 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 LINC00305Q7Z4B0 112 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 YRDCQ86U90 279 aaKnown RBP2.72□□□□□ -1.97
CSMD3-209ENST00000519485 UBALD2Q8IYN6 164 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 OR11H6Q8NGC7 330 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 OR4C13Q8NGP0 309 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 CT55Q8WUE5 264 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 RPEQ96AT9 228 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 FLYWCH2Q96CP2 140 aaKnown RBP2.72□□□□□ -1.97
CSMD3-209ENST00000519485 FXYD5Q96DB9 178 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 FAM167A-AS1Q96KT0 104 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 SPAG8Q99932 426 aaPredicted RBP2.72□□□□□ -1.97
CSMD3-209ENST00000519485 SRSF8Q9BRL6 282 aaKnown RBP2.72□□□□□ -1.97
CSMD3-209ENST00000519485 HIGD1AQ9Y241 93 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 KLF13Q9Y2Y9 288 aaPredicted RBP2.72□□□□□ -1.97
CSMD3-209ENST00000519485 SHANK1Q9Y566 2161 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 U3KQK5 164 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 MYO7BQ6PIF6 2116 aa2.72□□□□□ -1.97
CSMD3-209ENST00000519485 KIAA2026Q5HYC2 2103 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 TRAV12-1A0A0B4J245 112 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 IGHV1OR15-9A0A0B4J2B8 117 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 IGHG4P01861 327 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 ORM1P02763 201 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 ATP5G1P05496 136 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 CSN3P07498 182 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 FRMD6-AS1P0C7T7 363 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 ZNF688P0C7X2 276 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 RNASE2P10153 161 aaKnown RBP2.71□□□□□ -1.98
CSMD3-209ENST00000519485 COX6A1P12074 109 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 HERVK_113P61574 105 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 CACNG7P62955 275 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 ATP5G2Q06055 141 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 C12orf74Q32Q52 190 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 GDF5OSQ5U4N7 250 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 FAM104BQ5XKR9 115 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 NOTCH2NLQ7Z3S9 236 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 MOB3BQ86TA1 216 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 Q86TA4 180 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 GTSCR1Q86UQ5 136 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 TUSC5Q8IXB3 177 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 C8orf31Q8N9H6 132 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 FGFBP3Q8TAT2 258 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 TMEM167AQ8TBQ9 72 aa2.71□□□□□ -1.98
CSMD3-209ENST00000519485 SRSF12Q8WXF0 261 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms