RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 MIC13Q5XKP0 118 aa11.11□□□□□ -0.63
MRPS28-204ENST00000519120 MZT2BQ6NZ67 158 aa11.11□□□□□ -0.63
MRPS28-204ENST00000519120 STX12Q86Y82 276 aa11.11□□□□□ -0.63
MRPS28-204ENST00000519120 TMEM252Q8N6L7 170 aa11.11□□□□□ -0.63
MRPS28-204ENST00000519120 DNAH2Q9P225 4427 aa11.1□□□□□ -0.63
MRPS28-204ENST00000519120 H3BQ15 152 aa11.1□□□□□ -0.63
MRPS28-204ENST00000519120 M0R2N4 97 aa11.1□□□□□ -0.63
MRPS28-204ENST00000519120 MPDU1O75352 247 aa11.1□□□□□ -0.63
MRPS28-204ENST00000519120 RAB32Q13637 225 aa11.1□□□□□ -0.63
MRPS28-204ENST00000519120 SOHLH1Q5JUK2 328 aa11.1□□□□□ -0.63
MRPS28-204ENST00000519120 S100ZQ8WXG8 99 aa11.1□□□□□ -0.63
MRPS28-204ENST00000519120 MRPL53Q96EL3 112 aaKnown RBP11.1□□□□□ -0.63
MRPS28-204ENST00000519120 SLC39A9Q9NUM3 307 aa11.1□□□□□ -0.63
MRPS28-204ENST00000519120 FAT2Q9NYQ8 4349 aa11.09□□□□□ -0.63
MRPS28-204ENST00000519120 IGSF23A1L1A6 192 aa11.09□□□□□ -0.63
MRPS28-204ENST00000519120 PRAC2D3DTV9 90 aa11.09□□□□□ -0.63
MRPS28-204ENST00000519120 NPIPB6E9PJ23 425 aa11.09□□□□□ -0.63
MRPS28-204ENST00000519120 S100A10P60903 97 aa11.09□□□□□ -0.63
MRPS28-204ENST00000519120 ASAH1Q13510 395 aa11.09□□□□□ -0.63
MRPS28-204ENST00000519120 HERC2O95714 4834 aa11.09□□□□□ -0.63
MRPS28-204ENST00000519120 IGLV2-18A0A075B6J9 118 aa11.08□□□□□ -0.64
MRPS28-204ENST00000519120 UBE2L5PA0A1B0GUS4 154 aa11.08□□□□□ -0.64
MRPS28-204ENST00000519120 F5H768 121 aa11.08□□□□□ -0.64
MRPS28-204ENST00000519120 SNRPCP09234 159 aaKnown RBP11.08□□□□□ -0.64
MRPS28-204ENST00000519120 BAXQ07812 192 aa11.08□□□□□ -0.64
MRPS28-204ENST00000519120 GFI1BQ5VTD9 330 aa11.08□□□□□ -0.64
MRPS28-204ENST00000519120 LINC00612Q8N6U2 182 aa11.08□□□□□ -0.64
MRPS28-204ENST00000519120 TMEM14CQ9P0S9 112 aa11.08□□□□□ -0.64
MRPS28-204ENST00000519120 TRBV19A0A075B6N1 114 aa11.07□□□□□ -0.64
MRPS28-204ENST00000519120 TRAV5A0A0B4J249 113 aa11.07□□□□□ -0.64
MRPS28-204ENST00000519120 H3BTX0 84 aa11.07□□□□□ -0.64
MRPS28-204ENST00000519120 HTN1P15515 57 aa11.07□□□□□ -0.64
MRPS28-204ENST00000519120 LEPP41159 167 aa11.07□□□□□ -0.64
MRPS28-204ENST00000519120 PDE6HQ13956 83 aa11.07□□□□□ -0.64
MRPS28-204ENST00000519120 FCN2Q15485 313 aa11.07□□□□□ -0.64
MRPS28-204ENST00000519120 CCDC28AQ8IWP9 274 aa11.07□□□□□ -0.64
MRPS28-204ENST00000519120 ATG101Q9BSB4 218 aa11.07□□□□□ -0.64
MRPS28-204ENST00000519120 ZNF586Q9NXT0 402 aa11.07□□□□□ -0.64
MRPS28-204ENST00000519120 PRELID1Q9Y255 219 aa11.07□□□□□ -0.64
MRPS28-204ENST00000519120 DNAH17Q9UFH2 4485 aa11.07□□□□□ -0.64
MRPS28-204ENST00000519120 HIST1H1EP10412 219 aaKnown RBP11.06□□□□□ -0.64
MRPS28-204ENST00000519120 FGF7P21781 194 aa11.06□□□□□ -0.64
MRPS28-204ENST00000519120 KIR3DS1Q14943 382 aa11.06□□□□□ -0.64
MRPS28-204ENST00000519120 GPN1Q9HCN4 374 aaPredicted RBP11.06□□□□□ -0.64
MRPS28-204ENST00000519120 NOP10Q9NPE3 64 aaKnown RBP11.06□□□□□ -0.64
MRPS28-204ENST00000519120 CT45A10P0DMU9 189 aa11.05□□□□□ -0.64
MRPS28-204ENST00000519120 C1orf134Q5TEV5 83 aa11.05□□□□□ -0.64
MRPS28-204ENST00000519120 ZNF503Q96F45 646 aa11.05□□□□□ -0.64
MRPS28-204ENST00000519120 PYGO2Q9BRQ0 406 aa11.05□□□□□ -0.64
MRPS28-204ENST00000519120 NPCDR1Q9BY65 106 aa11.05□□□□□ -0.64
MRPS28-204ENST00000519120 PARD6GQ9BYG4 376 aaPredicted RBP11.05□□□□□ -0.64
MRPS28-204ENST00000519120 NACAE9PAV3 2078 aa11.05□□□□□ -0.64
MRPS28-204ENST00000519120 RLN2P04090 185 aa11.04□□□□□ -0.64
MRPS28-204ENST00000519120 SLC25A5P05141 298 aaKnown RBP11.04□□□□□ -0.64
MRPS28-204ENST00000519120 MED14OSP0DP75 135 aa11.04□□□□□ -0.64
MRPS28-204ENST00000519120 PRB4P10163 310 aaPredicted RBP11.04□□□□□ -0.64
MRPS28-204ENST00000519120 CCL18P55774 89 aa11.04□□□□□ -0.64
MRPS28-204ENST00000519120 ZNRF2Q8NHG8 242 aa11.04□□□□□ -0.64
MRPS28-204ENST00000519120 NMES1Q9C002 83 aa11.04□□□□□ -0.64
MRPS28-204ENST00000519120 SLC25A31Q9H0C2 315 aa11.04□□□□□ -0.64
MRPS28-204ENST00000519120 SNURFLB1AK76 121 aa11.03□□□□□ -0.64
MRPS28-204ENST00000519120 E5RGE8 158 aa11.03□□□□□ -0.64
MRPS28-204ENST00000519120 H3BNG1 76 aa11.03□□□□□ -0.64
MRPS28-204ENST00000519120 PRAF2O60831 178 aa11.03□□□□□ -0.64
MRPS28-204ENST00000519120 UPK1BO75841 260 aa11.03□□□□□ -0.64
MRPS28-204ENST00000519120 NDUFB4O95168 129 aa11.03□□□□□ -0.64
MRPS28-204ENST00000519120 NUDT3O95989 172 aa11.03□□□□□ -0.64
MRPS28-204ENST00000519120 DAZ2Q13117 558 aaKnown RBP11.03□□□□□ -0.64
MRPS28-204ENST00000519120 ENKURQ8TC29 256 aa11.03□□□□□ -0.64
MRPS28-204ENST00000519120 RNF141Q8WVD5 230 aa11.03□□□□□ -0.64
MRPS28-204ENST00000519120 LINC00477Q96M19 166 aa11.03□□□□□ -0.64
MRPS28-204ENST00000519120 LINC00467Q9BRT7 94 aa11.03□□□□□ -0.64
MRPS28-204ENST00000519120 KCNIP2Q9NS61 270 aa11.03□□□□□ -0.64
MRPS28-204ENST00000519120 KIAA1109Q2LD37 5005 aa11.03□□□□□ -0.64
MRPS28-204ENST00000519120 TRAV12-3A0A0B4J271 114 aa11.02□□□□□ -0.65
MRPS28-204ENST00000519120 NBDYA0A0U1RRE5 68 aa11.02□□□□□ -0.65
MRPS28-204ENST00000519120 KLLNB2CW77 178 aa11.02□□□□□ -0.65
MRPS28-204ENST00000519120 M0R3E3 92 aa11.02□□□□□ -0.65
MRPS28-204ENST00000519120 NMBP08949 121 aa11.02□□□□□ -0.65
MRPS28-204ENST00000519120 CYCSP99999 105 aaKnown RBP11.02□□□□□ -0.65
MRPS28-204ENST00000519120 OR5C1Q8NGR4 320 aa11.02□□□□□ -0.65
MRPS28-204ENST00000519120 FAM19A4Q96LR4 140 aa11.02□□□□□ -0.65
MRPS28-204ENST00000519120 AAMDCQ9H7C9 122 aa11.02□□□□□ -0.65
MRPS28-204ENST00000519120 TIMM9Q9Y5J7 89 aa11.02□□□□□ -0.65
MRPS28-204ENST00000519120 PYYP10082 97 aa11.01□□□□□ -0.65
MRPS28-204ENST00000519120 M6PRP20645 277 aa11.01□□□□□ -0.65
MRPS28-204ENST00000519120 NHLH2Q02577 135 aa11.01□□□□□ -0.65
MRPS28-204ENST00000519120 C9orf47Q6ZRZ4 202 aa11.01□□□□□ -0.65
MRPS28-204ENST00000519120 ZNF680Q8NEM1 530 aa11.01□□□□□ -0.65
MRPS28-204ENST00000519120 RXFP4Q8TDU9 374 aa11.01□□□□□ -0.65
MRPS28-204ENST00000519120 C18orf15Q96N68 181 aa11.01□□□□□ -0.65
MRPS28-204ENST00000519120 KRTAP17-1Q9BYP8 105 aa11.01□□□□□ -0.65
MRPS28-204ENST00000519120 LINC00588Q9Y4M8 146 aa11.01□□□□□ -0.65
MRPS28-204ENST00000519120 PKD1P98161 4303 aa11□□□□□ -0.65
MRPS28-204ENST00000519120 C7orf71A4D174 169 aa11□□□□□ -0.65
MRPS28-204ENST00000519120 CRISP2P16562 243 aa11□□□□□ -0.65
MRPS28-204ENST00000519120 CLINT1Q14677 625 aa11□□□□□ -0.65
MRPS28-204ENST00000519120 GCSAMLQ5JQS6 135 aa11□□□□□ -0.65
MRPS28-204ENST00000519120 GNPNAT1Q96EK6 184 aaPredicted RBP11□□□□□ -0.65
MRPS28-204ENST00000519120 FAM167A-AS1Q96KT0 104 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms