RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 MBP02144 154 aa15.95■□□□□ 0.14
VEGFA-217ENST00000518538 AMBPP02760 352 aa15.95■□□□□ 0.14
VEGFA-217ENST00000518538 PRB4P10163 310 aaPredicted RBP15.95■□□□□ 0.14
VEGFA-217ENST00000518538 UBE2L3P68036 154 aaKnown RBP15.95■□□□□ 0.14
VEGFA-217ENST00000518538 FAM122CQ6P4D5 195 aa15.95■□□□□ 0.14
VEGFA-217ENST00000518538 AAMDCQ9H7C9 122 aa15.95■□□□□ 0.14
VEGFA-217ENST00000518538 PRAC2D3DTV9 90 aa15.94■□□□□ 0.14
VEGFA-217ENST00000518538 BOLA2-SMG1P6H3BVE0 249 aa15.94■□□□□ 0.14
VEGFA-217ENST00000518538 MIFP14174 115 aa15.94■□□□□ 0.14
VEGFA-217ENST00000518538 ZNF705AQ6ZN79 300 aaPredicted RBP15.94■□□□□ 0.14
VEGFA-217ENST00000518538 KCNRGQ8N5I3 272 aa15.94■□□□□ 0.14
VEGFA-217ENST00000518538 Q8NAQ8 132 aa15.94■□□□□ 0.14
VEGFA-217ENST00000518538 OR10J6PQ8NGY7 276 aa15.94■□□□□ 0.14
VEGFA-217ENST00000518538 SPINK13Q1W4C9 94 aa15.93■□□□□ 0.14
VEGFA-217ENST00000518538 CASC10Q5T4H9 136 aa15.93■□□□□ 0.14
VEGFA-217ENST00000518538 PQLC2Q6ZP29 291 aa15.93■□□□□ 0.14
VEGFA-217ENST00000518538 EXOC3-AS1Q8N2X6 119 aa15.93■□□□□ 0.14
VEGFA-217ENST00000518538 ST6GAL2Q96JF0 529 aa15.93■□□□□ 0.14
VEGFA-217ENST00000518538 CYTL1Q9NRR1 136 aa15.93■□□□□ 0.14
VEGFA-217ENST00000518538 IGHV4-28A0A0C4DH34 117 aa15.92■□□□□ 0.14
VEGFA-217ENST00000518538 M0R2Z0 102 aa15.92■□□□□ 0.14
VEGFA-217ENST00000518538 M0R3E3 92 aa15.92■□□□□ 0.14
VEGFA-217ENST00000518538 EIF3GO75821 320 aaKnown RBP eCLIP15.92■□□□□ 0.14
VEGFA-217ENST00000518538 CDC34P49427 236 aaPredicted RBP15.92■□□□□ 0.14
VEGFA-217ENST00000518538 RPP25LQ8N5L8 163 aaKnown RBP15.92■□□□□ 0.14
VEGFA-217ENST00000518538 PHYHIPLQ96FC7 376 aa15.92■□□□□ 0.14
VEGFA-217ENST00000518538 IGF2BP2-AS1Q96M15 143 aa15.92■□□□□ 0.14
VEGFA-217ENST00000518538 ARPC5LQ9BPX5 153 aa15.92■□□□□ 0.14
VEGFA-217ENST00000518538 PPP1R14DQ9NXH3 145 aa15.92■□□□□ 0.14
VEGFA-217ENST00000518538 ICAM4Q14773 271 aa15.91■□□□□ 0.14
VEGFA-217ENST00000518538 ZFAND6Q6FIF0 208 aa15.91■□□□□ 0.14
VEGFA-217ENST00000518538 LYPD1Q8N2G4 141 aa15.91■□□□□ 0.14
VEGFA-217ENST00000518538 NEU1Q99519 415 aa15.91■□□□□ 0.14
VEGFA-217ENST00000518538 GOLT1BQ9Y3E0 138 aa15.91■□□□□ 0.14
VEGFA-217ENST00000518538 A0A0D9SG52 128 aa15.9■□□□□ 0.14
VEGFA-217ENST00000518538 NPIPB6E9PJ23 425 aa15.9■□□□□ 0.14
VEGFA-217ENST00000518538 DEFB4AO15263 64 aa15.9■□□□□ 0.14
VEGFA-217ENST00000518538 CRXO43186 299 aaPredicted RBP15.9■□□□□ 0.14
VEGFA-217ENST00000518538 TCTE3Q8IZS6 198 aa15.9■□□□□ 0.14
VEGFA-217ENST00000518538 C1orf158Q8N1D5 194 aa15.9■□□□□ 0.14
VEGFA-217ENST00000518538 IGHV3OR16-12A0A075B7B8 117 aa15.89■□□□□ 0.13
VEGFA-217ENST00000518538 HMGB3O15347 200 aaKnown RBP15.89■□□□□ 0.13
VEGFA-217ENST00000518538 INSP01308 110 aa15.89■□□□□ 0.13
VEGFA-217ENST00000518538 RBMY1A1P0DJD3 496 aaKnown RBP15.89■□□□□ 0.13
VEGFA-217ENST00000518538 RBMY1CP0DJD4 496 aa15.89■□□□□ 0.13
VEGFA-217ENST00000518538 RBMY1FQ15415 496 aaKnown RBP15.89■□□□□ 0.13
VEGFA-217ENST00000518538 RAB24Q969Q5 203 aa15.89■□□□□ 0.13
VEGFA-217ENST00000518538 SMIM9A6NGZ8 99 aa15.88■□□□□ 0.13
VEGFA-217ENST00000518538 STAG3L2P0CL84 134 aa15.88■□□□□ 0.13
VEGFA-217ENST00000518538 STAG3L3P0CL85 134 aa15.88■□□□□ 0.13
VEGFA-217ENST00000518538 CDKN1BP46527 198 aa15.88■□□□□ 0.13
VEGFA-217ENST00000518538 RANP62826 216 aaKnown RBP15.88■□□□□ 0.13
VEGFA-217ENST00000518538 BAP18Q8IXM2 172 aa15.88■□□□□ 0.13
VEGFA-217ENST00000518538 ODF3Q96PU9 254 aa15.88■□□□□ 0.13
VEGFA-217ENST00000518538 ACTR3CQ9C0K3 210 aaPredicted RBP15.88■□□□□ 0.13
VEGFA-217ENST00000518538 Q9H3A6 140 aa15.88■□□□□ 0.13
VEGFA-217ENST00000518538 ARL14EPLP0DKL9 152 aa15.87■□□□□ 0.13
VEGFA-217ENST00000518538 hCG_2014768A0A024R1R8 64 aa15.86■□□□□ 0.13
VEGFA-217ENST00000518538 TRAV12-2A0A075B6T6 113 aa15.86■□□□□ 0.13
VEGFA-217ENST00000518538 KANTRA0A1W2PQU2 76 aa15.86■□□□□ 0.13
VEGFA-217ENST00000518538 BCL2L11O43521 198 aa15.86■□□□□ 0.13
VEGFA-217ENST00000518538 CT45A10P0DMU9 189 aa15.86■□□□□ 0.13
VEGFA-217ENST00000518538 TSPOP30536 169 aa15.86■□□□□ 0.13
VEGFA-217ENST00000518538 TMEM208Q9BTX3 173 aa15.86■□□□□ 0.13
VEGFA-217ENST00000518538 HBE1P02100 147 aa15.85■□□□□ 0.13
VEGFA-217ENST00000518538 CSN1S1P47710 185 aa15.85■□□□□ 0.13
VEGFA-217ENST00000518538 AKR1C8PQ5T2L2 129 aa15.85■□□□□ 0.13
VEGFA-217ENST00000518538 C11orf45Q8TAV5 145 aa15.85■□□□□ 0.13
VEGFA-217ENST00000518538 LINC00477Q96M19 166 aa15.85■□□□□ 0.13
VEGFA-217ENST00000518538 IGKV2-40A0A087WW87 121 aaPredicted RBP15.84■□□□□ 0.13
VEGFA-217ENST00000518538 IGKV2D-40P01614 121 aaPredicted RBP15.84■□□□□ 0.13
VEGFA-217ENST00000518538 LEPP41159 167 aa15.84■□□□□ 0.13
VEGFA-217ENST00000518538 ERCC8Q13216 396 aa15.84■□□□□ 0.13
VEGFA-217ENST00000518538 C9orf47Q6ZRZ4 202 aa15.84■□□□□ 0.13
VEGFA-217ENST00000518538 OTORQ9NRC9 128 aa15.84■□□□□ 0.13
VEGFA-217ENST00000518538 TMEM189A5PLL7 270 aa15.83■□□□□ 0.12
VEGFA-217ENST00000518538 CXorf65A6NEN9 183 aa15.83■□□□□ 0.12
VEGFA-217ENST00000518538 CXorf1O96002 111 aa15.83■□□□□ 0.12
VEGFA-217ENST00000518538 GCHFRP30047 84 aa15.83■□□□□ 0.12
VEGFA-217ENST00000518538 PMS2P11Q13670 270 aa15.83■□□□□ 0.12
VEGFA-217ENST00000518538 FAM74A1Q5RGS3 127 aa15.83■□□□□ 0.12
VEGFA-217ENST00000518538 TMUB2Q71RG4 321 aa15.83■□□□□ 0.12
VEGFA-217ENST00000518538 SSX7Q7RTT5 188 aa15.83■□□□□ 0.12
VEGFA-217ENST00000518538 AKAP14Q86UN6 197 aa15.83■□□□□ 0.12
VEGFA-217ENST00000518538 TMEM256Q8N2U0 113 aa15.83■□□□□ 0.12
VEGFA-217ENST00000518538 SUN5Q8TC36 379 aa15.83■□□□□ 0.12
VEGFA-217ENST00000518538 ZNF471Q9BX82 626 aaPredicted RBP15.83■□□□□ 0.12
VEGFA-217ENST00000518538 AGPAT4-IT1Q9H0P7 198 aa15.83■□□□□ 0.12
VEGFA-217ENST00000518538 CTXND1A0A1B0GTU2 59 aa15.82■□□□□ 0.12
VEGFA-217ENST00000518538 PFDN1O60925 122 aa15.82■□□□□ 0.12
VEGFA-217ENST00000518538 C1QBP02746 253 aa15.82■□□□□ 0.12
VEGFA-217ENST00000518538 ZNF726P1Q15940 193 aa15.82■□□□□ 0.12
VEGFA-217ENST00000518538 RRN3P1Q2M238 152 aa15.82■□□□□ 0.12
VEGFA-217ENST00000518538 RXFP4Q8TDU9 374 aa15.82■□□□□ 0.12
VEGFA-217ENST00000518538 C20orf144Q9BQM9 153 aa15.82■□□□□ 0.12
VEGFA-217ENST00000518538 RBAKDNA6NC62 111 aa15.81■□□□□ 0.12
VEGFA-217ENST00000518538 PGPA6NDG6 321 aa15.81■□□□□ 0.12
VEGFA-217ENST00000518538 SEC11BP0C7V7 166 aa15.81■□□□□ 0.12
VEGFA-217ENST00000518538 NANOS2P60321 138 aaKnown RBP15.81■□□□□ 0.12
VEGFA-217ENST00000518538 EIF5AP63241 154 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms