RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 SSNA1O43805 119 aa13.21□□□□□ -0.29
HOXA3-203ENST00000518451 LRRC37A5PQ49AS3 106 aa13.21□□□□□ -0.29
HOXA3-203ENST00000518451 NPCDR1Q9BY65 106 aa13.21□□□□□ -0.29
HOXA3-203ENST00000518451 KCNIP2Q9NS61 270 aa13.21□□□□□ -0.29
HOXA3-203ENST00000518451 TMEM14CQ9P0S9 112 aa13.21□□□□□ -0.29
HOXA3-203ENST00000518451 H3BTX0 84 aa13.2□□□□□ -0.3
HOXA3-203ENST00000518451 SLC17A3O00476 420 aa13.2□□□□□ -0.3
HOXA3-203ENST00000518451 PET100P0DJ07 73 aa13.2□□□□□ -0.3
HOXA3-203ENST00000518451 HTN3P15516 51 aa13.2□□□□□ -0.3
HOXA3-203ENST00000518451 POM121L12Q8N7R1 296 aa13.2□□□□□ -0.3
HOXA3-203ENST00000518451 PLA2G2EQ9NZK7 142 aa13.2□□□□□ -0.3
HOXA3-203ENST00000518451 OR5AC2Q9NZP5 309 aa13.2□□□□□ -0.3
HOXA3-203ENST00000518451 TIMM9Q9Y5J7 89 aa13.2□□□□□ -0.3
HOXA3-203ENST00000518451 H7BYZ3 331 aa13.19□□□□□ -0.3
HOXA3-203ENST00000518451 HIST1H1EP10412 219 aaKnown RBP13.19□□□□□ -0.3
HOXA3-203ENST00000518451 HTN1P15515 57 aa13.19□□□□□ -0.3
HOXA3-203ENST00000518451 ZNF493Q6ZR52 646 aa13.19□□□□□ -0.3
HOXA3-203ENST00000518451 MRPL53Q96EL3 112 aaKnown RBP13.19□□□□□ -0.3
HOXA3-203ENST00000518451 C16orf74Q96GX8 76 aa13.19□□□□□ -0.3
HOXA3-203ENST00000518451 ZNF586Q9NXT0 402 aa13.19□□□□□ -0.3
HOXA3-203ENST00000518451 PRELID1Q9Y255 219 aa13.19□□□□□ -0.3
HOXA3-203ENST00000518451 TRBV19A0A075B6N1 114 aa13.18□□□□□ -0.3
HOXA3-203ENST00000518451 C17orf112F2Z3M2 114 aa13.18□□□□□ -0.3
HOXA3-203ENST00000518451 PDE6HQ13956 83 aa13.18□□□□□ -0.3
HOXA3-203ENST00000518451 CCDC28AQ8IWP9 274 aa13.18□□□□□ -0.3
HOXA3-203ENST00000518451 THAP6Q8TBB0 222 aa13.18□□□□□ -0.3
HOXA3-203ENST00000518451 PPP1R1CQ8WVI7 109 aa13.18□□□□□ -0.3
HOXA3-203ENST00000518451 PRAC2D3DTV9 90 aa13.17□□□□□ -0.3
HOXA3-203ENST00000518451 H0YIZ8 118 aa13.17□□□□□ -0.3
HOXA3-203ENST00000518451 PRM2P04554 102 aa13.17□□□□□ -0.3
HOXA3-203ENST00000518451 AZU1P20160 251 aa13.17□□□□□ -0.3
HOXA3-203ENST00000518451 LEPP41159 167 aa13.17□□□□□ -0.3
HOXA3-203ENST00000518451 H2BFSP57053 126 aa13.17□□□□□ -0.3
HOXA3-203ENST00000518451 CLINT1Q14677 625 aa13.17□□□□□ -0.3
HOXA3-203ENST00000518451 ODF3Q96PU9 254 aa13.17□□□□□ -0.3
HOXA3-203ENST00000518451 AAMDCQ9H7C9 122 aa13.17□□□□□ -0.3
HOXA3-203ENST00000518451 TIMM8BQ9Y5J9 83 aaPredicted RBP13.17□□□□□ -0.3
HOXA3-203ENST00000518451 DEFB130BP0DP73 79 aa13.16□□□□□ -0.3
HOXA3-203ENST00000518451 DEFB130AP0DP74 79 aa13.16□□□□□ -0.3
HOXA3-203ENST00000518451 WDR61Q9GZS3 305 aaKnown RBP13.16□□□□□ -0.3
HOXA3-203ENST00000518451 NPIPB6E9PJ23 425 aa13.15□□□□□ -0.3
HOXA3-203ENST00000518451 MPC2O95563 127 aa13.15□□□□□ -0.3
HOXA3-203ENST00000518451 PRB4P10163 310 aaPredicted RBP13.15□□□□□ -0.3
HOXA3-203ENST00000518451 UBE2DNLQ8IWF7 75 aa13.15□□□□□ -0.3
HOXA3-203ENST00000518451 TMEM263Q8WUH6 116 aaKnown RBP13.15□□□□□ -0.3
HOXA3-203ENST00000518451 MRPL32Q9BYC8 188 aaKnown RBP13.15□□□□□ -0.3
HOXA3-203ENST00000518451 BIRC6Q9NR09 4857 aa13.14□□□□□ -0.31
HOXA3-203ENST00000518451 CBY3A6NI87 242 aa13.14□□□□□ -0.31
HOXA3-203ENST00000518451 IFNA5P01569 189 aa13.14□□□□□ -0.31
HOXA3-203ENST00000518451 RNF212Q495C1 297 aa13.14□□□□□ -0.31
HOXA3-203ENST00000518451 GCSAMLQ5JQS6 135 aa13.14□□□□□ -0.31
HOXA3-203ENST00000518451 C15orf53Q8NAA6 179 aa13.14□□□□□ -0.31
HOXA3-203ENST00000518451 SCGB1C1Q8TD33 95 aa13.14□□□□□ -0.31
HOXA3-203ENST00000518451 BLNKQ8WV28 456 aa13.14□□□□□ -0.31
HOXA3-203ENST00000518451 LINC00477Q96M19 166 aa13.14□□□□□ -0.31
HOXA3-203ENST00000518451 ATP5SQ99766 215 aa13.14□□□□□ -0.31
HOXA3-203ENST00000518451 OR51M1Q9H341 326 aa13.14□□□□□ -0.31
HOXA3-203ENST00000518451 PLAC8L1A1L4L8 177 aa13.13□□□□□ -0.31
HOXA3-203ENST00000518451 ATP5G1P05496 136 aa13.13□□□□□ -0.31
HOXA3-203ENST00000518451 NBEAP1P0C6P0 100 aa13.13□□□□□ -0.31
HOXA3-203ENST00000518451 CT45A10P0DMU9 189 aa13.13□□□□□ -0.31
HOXA3-203ENST00000518451 PYYP10082 97 aa13.13□□□□□ -0.31
HOXA3-203ENST00000518451 ATP5G3P48201 142 aa13.13□□□□□ -0.31
HOXA3-203ENST00000518451 GFI1BQ5VTD9 330 aa13.13□□□□□ -0.31
HOXA3-203ENST00000518451 TMEM88Q6PEY1 159 aa13.13□□□□□ -0.31
HOXA3-203ENST00000518451 KMT2AQ03164 3969 aa13.13□□□□□ -0.31
HOXA3-203ENST00000518451 NDUFB4O95168 129 aa13.12□□□□□ -0.31
HOXA3-203ENST00000518451 SLC25A5P05141 298 aaKnown RBP13.12□□□□□ -0.31
HOXA3-203ENST00000518451 RPL12P30050 165 aaKnown RBP13.12□□□□□ -0.31
HOXA3-203ENST00000518451 FCN2Q15485 313 aa13.12□□□□□ -0.31
HOXA3-203ENST00000518451 MIR17HGQ75NE6 70 aa13.12□□□□□ -0.31
HOXA3-203ENST00000518451 RNASE8Q8TDE3 154 aaKnown RBP13.12□□□□□ -0.31
HOXA3-203ENST00000518451 SLC25A2Q9BXI2 301 aa13.12□□□□□ -0.31
HOXA3-203ENST00000518451 FUT9Q9Y231 359 aa13.12□□□□□ -0.31
HOXA3-203ENST00000518451 HSPB11Q9Y547 144 aa13.12□□□□□ -0.31
HOXA3-203ENST00000518451 F5H768 121 aa13.11□□□□□ -0.31
HOXA3-203ENST00000518451 M0R3E3 92 aa13.11□□□□□ -0.31
HOXA3-203ENST00000518451 FAM167A-AS1Q96KT0 104 aa13.11□□□□□ -0.31
HOXA3-203ENST00000518451 PYGO2Q9BRQ0 406 aa13.11□□□□□ -0.31
HOXA3-203ENST00000518451 PAXXQ9BUH6 204 aa13.11□□□□□ -0.31
HOXA3-203ENST00000518451 PARD6GQ9BYG4 376 aaPredicted RBP13.11□□□□□ -0.31
HOXA3-203ENST00000518451 NOP10Q9NPE3 64 aaKnown RBP13.11□□□□□ -0.31
HOXA3-203ENST00000518451 TRAV12-3A0A0B4J271 114 aa13.1□□□□□ -0.31
HOXA3-203ENST00000518451 SNURFLB1AK76 121 aa13.1□□□□□ -0.31
HOXA3-203ENST00000518451 J3KRW8 73 aa13.1□□□□□ -0.31
HOXA3-203ENST00000518451 ICAM4Q14773 271 aa13.1□□□□□ -0.31
HOXA3-203ENST00000518451 KIR3DS1Q14943 382 aa13.1□□□□□ -0.31
HOXA3-203ENST00000518451 EXOC3-AS1Q8N2X6 119 aa13.1□□□□□ -0.31
HOXA3-203ENST00000518451 RNF141Q8WVD5 230 aa13.1□□□□□ -0.31
HOXA3-203ENST00000518451 VPS13DQ5THJ4 4388 aa13.1□□□□□ -0.31
HOXA3-203ENST00000518451 NMBP08949 121 aa13.09□□□□□ -0.31
HOXA3-203ENST00000518451 FAM3BP58499 235 aaPredicted RBP13.09□□□□□ -0.31
HOXA3-203ENST00000518451 TMEM78Q5T7P6 136 aa13.09□□□□□ -0.31
HOXA3-203ENST00000518451 C9orf47Q6ZRZ4 202 aa13.09□□□□□ -0.31
HOXA3-203ENST00000518451 LINC00336Q6ZUF6 198 aa13.09□□□□□ -0.31
HOXA3-203ENST00000518451 AGPAT4-IT1Q9H0P7 198 aa13.09□□□□□ -0.31
HOXA3-203ENST00000518451 OR7C2O60412 319 aa13.08□□□□□ -0.32
HOXA3-203ENST00000518451 CSN1S1P47710 185 aa13.08□□□□□ -0.32
HOXA3-203ENST00000518451 TAS2R45P59539 299 aa13.08□□□□□ -0.32
HOXA3-203ENST00000518451 ERCC8Q13216 396 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms