RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 FAM222AQ5U5X8 452 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 SAMD13Q5VXD3 122 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 ZNF773Q6PK81 442 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 SSX7Q7RTT5 188 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 C10orf67Q8IYJ2 551 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 PUSL1Q8N0Z8 303 aaKnown RBP2.03□□□□□ -2.08
PABPC1-206ENST00000518293 MS4A15Q8N5U1 240 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 ZFP41Q8N8Y5 198 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 OR10J6PQ8NGY7 276 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 OR2G3Q8NGZ4 309 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 OR1P1Q8NH06 330 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 TMEM230Q96A57 120 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 TSC22D3Q99576 134 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 TMEM70Q9BUB7 260 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 NXF2Q9GZY0 626 aaKnown RBP2.03□□□□□ -2.08
PABPC1-206ENST00000518293 VSIRQ9H7M9 311 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 FGF20Q9NP95 211 aaPredicted RBP2.03□□□□□ -2.08
PABPC1-206ENST00000518293 RBMX2Q9Y388 322 aaKnown RBP2.03□□□□□ -2.08
PABPC1-206ENST00000518293 AP4S1Q9Y587 144 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 F11RQ9Y624 299 aaKnown RBP2.03□□□□□ -2.08
PABPC1-206ENST00000518293 HSPG2P98160 4391 aa2.03□□□□□ -2.08
PABPC1-206ENST00000518293 DNAH2Q9P225 4427 aa2.03□□□□□ -2.09
PABPC1-206ENST00000518293 A0A075B6Q4 140 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 IGHV3OR16-8A0A075B7F1 116 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 TRAV30A0A087WSZ9 112 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 IGHV3-49A0A0A0MS15 119 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 IGHV3-74A0A0B4J1X5 117 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 TRAV3A0A0B4J244 114 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 TCRBV3S1A0A5B6 114 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 IGLC7A0M8Q6 106 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 PLAC8L1A1L4L8 177 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 KNCNA6PVL3 124 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 ZNF705FA8MVS1 300 aaPredicted RBP2.02□□□□□ -2.09
PABPC1-206ENST00000518293 TMEM14DPA8MWL7 114 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 TEX46H3BTG2 121 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 CORTO00230 105 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 UPK2O00526 184 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 GYG2O15488 501 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 SOCS1O15524 211 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 DENRO43583 198 aaKnown RBP2.02□□□□□ -2.09
PABPC1-206ENST00000518293 ARL6IP5O75915 188 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 SCGNO76038 276 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 HLA-DQB1P01920 261 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 SMR3BP02814 79 aaPredicted RBP2.02□□□□□ -2.09
PABPC1-206ENST00000518293 ZNF705DP0CH99 300 aaPredicted RBP2.02□□□□□ -2.09
PABPC1-206ENST00000518293 ZNF705BP0CI00 300 aaPredicted RBP2.02□□□□□ -2.09
PABPC1-206ENST00000518293 LIMS3P0CW19 117 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 LIMS4P0CW20 117 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 TBPP20226 339 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 DTYMKP23919 212 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 S100A7P31151 101 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 SNCAP37840 140 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 ETV1P50549 477 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 FGF8P55075 233 aaPredicted RBP2.02□□□□□ -2.09
PABPC1-206ENST00000518293 ERHP84090 104 aaKnown RBP2.02□□□□□ -2.09
PABPC1-206ENST00000518293 MSMO1Q15800 293 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 HSD17B12Q53GQ0 312 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 PSMG4Q5JS54 123 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 IDNKQ5T6J7 187 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 EBLN2Q6P2I7 272 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 SFXN4Q6P4A7 337 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 TOMM20LQ6UXN7 152 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 ZNF705AQ6ZN79 300 aaPredicted RBP2.02□□□□□ -2.09
PABPC1-206ENST00000518293 Q6ZS49 121 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 VKORC1L1Q8N0U8 176 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 CBR4Q8N4T8 237 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 ZNF555Q8NEP9 628 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 OR4C16Q8NGL9 310 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 OR1L4Q8NGR5 311 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 SLC25A46Q96AG3 418 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 GNPNAT1Q96EK6 184 aaPredicted RBP2.02□□□□□ -2.09
PABPC1-206ENST00000518293 CENPNQ96H22 339 aaPredicted RBP2.02□□□□□ -2.09
PABPC1-206ENST00000518293 ARHGAP5-AS1Q96IT6 56 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 PGLYRP3Q96LB9 341 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 DERL3Q96Q80 235 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 PECRQ9BY49 303 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 LPAR5Q9H1C0 372 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 MED4Q9NPJ6 270 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 COMMD9Q9P000 198 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 PRNDQ9UKY0 176 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 RAB22AQ9UL26 194 aa2.02□□□□□ -2.09
PABPC1-206ENST00000518293 YTHDF2Q9Y5A9 579 aaKnown RBP2.02□□□□□ -2.09
PABPC1-206ENST00000518293 DYNC1H1Q14204 4646 aaKnown RBP2.02□□□□□ -2.09
PABPC1-206ENST00000518293 IGHV3-21A0A0B4J1V1 117 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 IGKV1-6A0A0C4DH72 117 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 TEX50A0A1B0GTY4 177 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 EFCAB10A6NFE3 127 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 H3BMM0 161 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 H3BNG1 76 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 J3QRK9 145 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 K7EIM0 57 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 MYL12BO14950 172 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 ATG12O94817 140 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 C1QBP02746 253 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 TLX1NBP0CAT3 122 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 DEFB130BP0DP73 79 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 DEFB130AP0DP74 79 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 CD37P11049 281 aa2.01□□□□□ -2.09
PABPC1-206ENST00000518293 HLA-DRB4P13762 266 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms