RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 TRAV10A0A0B4J240 114 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 M0R378 163 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 TRIOO75962 3097 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 OR10J4P0C629 311 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 SCGB2B2Q4G0G5 96 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 ECM29Q5VYK3 1845 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 KRTAP26-1Q6PEX3 210 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 MED13LQ71F56 2210 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 TAF1LQ8IZX4 1826 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 EHBP1L1Q8N3D4 1523 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 C9orf16Q9BUW7 83 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 ADGRL3Q9HAR2 1447 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 ARMC1Q9NVT9 282 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 PYCARDQ9ULZ3 195 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 TNFSF18Q9UNG2 199 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 TACC2O95359 2948 aa0.51□□□□□ -2.33
SKP1-203ENST00000517625 SRRM2Q9UQ35 2752 aaKnown RBP0.51□□□□□ -2.33
SKP1-203ENST00000517625 NBASA2RRP1 2371 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 MUC4Q99102 2169 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 NCOA6Q14686 2063 aaPredicted RBP0.5□□□□□ -2.33
SKP1-203ENST00000517625 KMT2AQ03164 3969 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 DENND4CQ5VZ89 1909 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 RIMS1Q86UR5 1692 aaKnown RBP0.5□□□□□ -2.33
SKP1-203ENST00000517625 COL1A1P02452 1464 aaPredicted RBP0.5□□□□□ -2.33
SKP1-203ENST00000517625 HMGB3O15347 200 aaKnown RBP0.5□□□□□ -2.33
SKP1-203ENST00000517625 ERC2-IT1O76042 136 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 NDUFC2O95298 119 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 DNAL4O96015 105 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 HSD11B1P28845 292 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 SERPINB9P50453 376 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 DEFA3P59666 94 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 ARF6P62330 175 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 HAGHLQ6PII5 290 aaPredicted RBP0.5□□□□□ -2.33
SKP1-203ENST00000517625 LINC00575Q6W349 94 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 TEN1Q86WV5 123 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 OR5D14Q8NGL3 314 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 CHMP6Q96FZ7 201 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 PHB2Q99623 299 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 PCTPQ9UKL6 214 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 ABCA4P78363 2273 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 ZNF106Q9H2Y7 1883 aaKnown RBP0.5□□□□□ -2.33
SKP1-203ENST00000517625 CENPEQ02224 2701 aa0.5□□□□□ -2.33
SKP1-203ENST00000517625 DOPEY2Q9Y3R5 2298 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 YTHDC2Q9H6S0 1430 aaKnown RBP0.49□□□□□ -2.33
SKP1-203ENST00000517625 ZNF469Q96JG9 3925 aaPredicted RBP0.49□□□□□ -2.33
SKP1-203ENST00000517625 DUXBA0A1W2PPF3 345 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 COX7CP15954 63 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 DYNLT3P51808 116 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 EFNA4P52798 201 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 CDK6Q00534 326 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 TAF1AQ15573 450 aaPredicted RBP0.49□□□□□ -2.33
SKP1-203ENST00000517625 SPRNQ5BIV9 151 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 KRTAP19-3Q7Z4W3 81 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 OR10AG1Q8NH19 301 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 CCDC94Q9BW85 323 aaPredicted RBP0.49□□□□□ -2.33
SKP1-203ENST00000517625 NPCDR1Q9BY65 106 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 PBOV1Q9GZY1 135 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 TAS2R7Q9NYW3 318 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 OR52A1Q9UKL2 312 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 MGAQ8IWI9 3026 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 LRP6O75581 1613 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 BIVM-ERCC5R4GMW8 1640 aa0.49□□□□□ -2.33
SKP1-203ENST00000517625 LRRC7Q96NW7 1537 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 TRAV27A0A087WT01 109 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 F8W1H4 67 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 H3BRM9 83 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 TMEM256-PLSCR3K7ERE1 68 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 ZZEF1O43149 2961 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 IGLV3-1P01715 115 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 CXCL8P10145 99 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 CAPZBP47756 277 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 RAB5CP51148 216 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 NCALDP61601 193 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 OR5D16Q8NGK9 328 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 MUCL1Q96DR8 90 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 POPDC3Q9HBV1 291 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 HSPB8Q9UJY1 196 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 FAT3Q8TDW7 4589 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 EML6Q6ZMW3 1958 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 ZMYM4Q5VZL5 1548 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 LAMA4Q16363 1823 aa0.48□□□□□ -2.33
SKP1-203ENST00000517625 PEAK1Q9H792 1746 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 RFX7Q2KHR2 1363 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 TRAV5A0A0B4J249 113 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 M0R233 179 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 CST8O60676 142 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 NFYBP25208 207 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 HOXA6P31267 233 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 AKR1C8PQ5T2L2 129 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 DHRS4L2Q6PKH6 230 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 OR5AS1Q8N127 324 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 PXT1Q8NFP0 134 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 PSMF1Q92530 271 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 PRRT1Q99946 306 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 SH3BGRL3Q9H299 93 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 TMEM138Q9NPI0 162 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 PRNDQ9UKY0 176 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 SLIT1O75093 1534 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 ERCC6Q03468 1493 aa0.47□□□□□ -2.33
SKP1-203ENST00000517625 OR2T8A6NH00 312 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms