RNA–Protein interactions for RNA: ENST00000517049.1

RNU6-1271P-201, Transcript of RNA, U6 small nuclear 1271, pseudogene, humanhuman

BASIC

Gene RNU6-1271P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1271P-201ENST00000517049 RAB5CP51148 216 aa-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 SNRPD2P62316 118 aaKnown RBP-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 EMX2Q04743 252 aa-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 SLAMF1Q13291 335 aa-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 TNFAIP8L2Q6P589 184 aaPredicted RBP-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 UBE2DNLQ8IWF7 75 aa-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 OR5D16Q8NGK9 328 aa-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 STAG3L4Q8TBR4 150 aa-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 ZHX1-C8orf76Q96EF9 292 aa-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 UPF3BQ9BZI7 483 aaKnown RBP-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 PRTFDC1Q9NRG1 225 aa-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 FBXO5Q9UKT4 447 aa-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 NOSIPQ9Y314 301 aaKnown RBP-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 BZW2Q9Y6E2 419 aaKnown RBP-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 ZCCHC6Q5VYS8 1495 aaKnown RBP-2.2□□□□□ -2.76
RNU6-1271P-201ENST00000517049 HIGD1CA8MV81 97 aa-2.21□□□□□ -2.76
RNU6-1271P-201ENST00000517049 RD3LP0DJH9 198 aa-2.21□□□□□ -2.76
RNU6-1271P-201ENST00000517049 RAB5BP61020 215 aa-2.21□□□□□ -2.76
RNU6-1271P-201ENST00000517049 C1orf195Q5TG92 126 aa-2.21□□□□□ -2.76
RNU6-1271P-201ENST00000517049 C22orf39Q6P5X5 142 aa-2.21□□□□□ -2.76
RNU6-1271P-201ENST00000517049 SYCE1Q8N0S2 351 aa-2.21□□□□□ -2.76
RNU6-1271P-201ENST00000517049 OR4K15Q8NH41 348 aa-2.21□□□□□ -2.76
RNU6-1271P-201ENST00000517049 GNPDA2Q8TDQ7 276 aa-2.21□□□□□ -2.76
RNU6-1271P-201ENST00000517049 C1orf109Q9NX04 203 aa-2.21□□□□□ -2.76
RNU6-1271P-201ENST00000517049 SIPA1L3O60292 1781 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-1271P-201ENST00000517049 TRGV10A0A0A0MS01 117 aa-2.22□□□□□ -2.76
RNU6-1271P-201ENST00000517049 A0A0A6YYH2 397 aa-2.22□□□□□ -2.76
RNU6-1271P-201ENST00000517049 A6NJ64 397 aa-2.22□□□□□ -2.76
RNU6-1271P-201ENST00000517049 NAA20P61599 178 aa-2.22□□□□□ -2.76
RNU6-1271P-201ENST00000517049 TNNC1P63316 161 aa-2.22□□□□□ -2.76
RNU6-1271P-201ENST00000517049 HAMPP81172 84 aa-2.22□□□□□ -2.76
RNU6-1271P-201ENST00000517049 SFXN4Q6P4A7 337 aa-2.22□□□□□ -2.76
RNU6-1271P-201ENST00000517049 CD302Q8IX05 232 aa-2.22□□□□□ -2.76
RNU6-1271P-201ENST00000517049 LINC00269Q8N2A0 174 aa-2.22□□□□□ -2.76
RNU6-1271P-201ENST00000517049 SMIM19Q96E16 107 aa-2.22□□□□□ -2.76
RNU6-1271P-201ENST00000517049 ARL5BQ96KC2 179 aa-2.22□□□□□ -2.76
RNU6-1271P-201ENST00000517049 C20orf27Q9GZN8 174 aa-2.22□□□□□ -2.76
RNU6-1271P-201ENST00000517049 GOLGA3Q08378 1498 aa-2.22□□□□□ -2.77
RNU6-1271P-201ENST00000517049 PLXNB2O15031 1838 aa-2.22□□□□□ -2.77
RNU6-1271P-201ENST00000517049 USP54Q70EL1 1684 aa-2.22□□□□□ -2.77
RNU6-1271P-201ENST00000517049 NISCHQ9Y2I1 1504 aa-2.22□□□□□ -2.77
RNU6-1271P-201ENST00000517049 KIDINS220Q9ULH0 1771 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 DYNC1H1Q14204 4646 aaKnown RBP-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 WRNQ14191 1432 aaPredicted RBP eCLIP-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 A0A1B0GV50 99 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 H0Y980 276 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 TNFP01375 233 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 CCL2P13500 99 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 UCHL3P15374 230 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 LCN1P31025 176 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 H3F3AP84243 136 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 PMAIP1Q13794 54 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 HACD4Q5VWC8 232 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 LRRN1Q6UXK5 716 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 FAM172AQ8WUF8 416 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 CHCHD1Q96BP2 118 aaKnown RBP-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 CST11Q9H112 138 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 SPANXB1Q9NS25 103 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 MRPL36Q9P0J6 103 aaKnown RBP-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 NUP210LQ5VU65 1888 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 NINQ8N4C6 2090 aa-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 N4BP2Q86UW6 1770 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-1271P-201ENST00000517049 SACSQ9NZJ4 4579 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 CEP164Q9UPV0 1460 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 OR4C46A6NHA9 309 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 SPINK8P0C7L1 97 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 PYYP10082 97 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 SYT1P21579 422 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 RPL12P30050 165 aaKnown RBP-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 KDELR2P33947 212 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 RANP62826 216 aaKnown RBP-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 KRR1Q13601 381 aaKnown RBP-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 DIAPH2-AS1Q14236 149 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 ST13P4Q8IZP2 240 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 C12orf45Q8N5I9 185 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 ANKRD29Q8N6D5 301 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 SREK1IP1Q8N9Q2 155 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 OR51D1Q8NGF3 324 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 GRPEL2Q8TAA5 225 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 PIGXQ8TBF5 258 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 SLC25A40Q8TBP6 338 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 AP1S3Q96PC3 154 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 CASZ1Q86V15 1759 aa-2.24□□□□□ -2.77
RNU6-1271P-201ENST00000517049 RIF1Q5UIP0 2472 aaKnown RBP-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 TRAV17A0A0B4J275 112 aa-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 EEF1E1-BLOC1S5C9J1V9 151 aa-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 SMLR1H3BR10 107 aa-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 RBP1P09455 135 aa-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 HIST1H1TP22492 207 aaPredicted RBP-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 SRP14P37108 136 aaKnown RBP-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 AESQ08117 197 aa-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 CST9Q5W186 159 aa-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 SPOPLQ6IQ16 392 aa-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 Q6ZRX8 168 aa-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 CCDC124Q96CT7 223 aaKnown RBP-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 KCTD7Q96MP8 289 aa-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 OR51I1Q9H343 314 aa-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 MAP1LC3AQ9H492 121 aa-2.25□□□□□ -2.77
RNU6-1271P-201ENST00000517049 TMEM242Q9NWH2 141 aa-2.25□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms