RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 GRINAQ7Z429 371 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 ARL17AQ8IVW1 177 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 SMIM20Q8N5G0 67 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 FAM24BQ8N5W8 94 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 OR5AK2Q8NH90 309 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 MALSU1Q96EH3 234 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 BORCS8Q96FH0 119 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 OR4C12Q96R67 309 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 CCL19Q99731 98 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 PRRT1Q99946 306 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 CCDC94Q9BW85 323 aaPredicted RBP0.26□□□□□ -2.37
NEDD4-211ENST00000514893 CST11Q9H112 138 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 C10orf95Q9H7T3 257 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 HSPB8Q9UJY1 196 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 RNF11Q9Y3C5 154 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 UBR2Q8IWV8 1755 aa0.26□□□□□ -2.37
NEDD4-211ENST00000514893 MAST4O15021 2626 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 UNC13CQ8NB66 2214 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 CITO14578 2027 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 FANCMQ8IYD8 2048 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 BCL9O00512 1426 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 PRORSD1PA6NEY8 169 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 PIAS1O75925 651 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 CSN2P05814 226 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 GLRXP35754 106 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 RPL35P42766 123 aaKnown RBP0.25□□□□□ -2.37
NEDD4-211ENST00000514893 GNG3P63215 75 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 POU6F1Q14863 301 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 RTL8BQ17RB0 113 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 C1orf140Q5VVS0 124 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 FOXI2Q6ZQN5 318 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 ZCCHC23Q6ZST2 131 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 OR5H6Q8NGV6 325 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 CDC26Q8NHZ8 85 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 AP3S1Q92572 193 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 EFCAB11Q9BUY7 163 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 RTL8AQ9BWD3 113 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 OR2H1Q9GZK4 316 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 GID8Q9NWU2 228 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 NAT8BQ9UHF3 227 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 NAV2Q8IVL1 2488 aa0.25□□□□□ -2.37
NEDD4-211ENST00000514893 CHD3Q12873 2000 aaKnown RBP0.25□□□□□ -2.37
NEDD4-211ENST00000514893 ZFC3H1O60293 1989 aaKnown RBP0.25□□□□□ -2.37
NEDD4-211ENST00000514893 FRMPD1Q5SYB0 1578 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 NAV3Q8IVL0 2385 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 A0A087WSZ3 146 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 A0A1W2PRS3 328 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 BBIP1A8MTZ0 92 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 MFSD11O43934 449 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 LY6G6CO95867 125 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 FABP4P15090 132 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 TCTAP57738 103 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 SNRPD3P62318 126 aaKnown RBP0.24□□□□□ -2.37
NEDD4-211ENST00000514893 LTC4SQ16873 150 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 LINC00299Q6ZSB3 139 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 TMED4Q7Z7H5 227 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 STX19Q8N4C7 294 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 TEX29Q8N6K0 151 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 C5orf17Q8NAS9 161 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 OR4B1Q8NGF8 309 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 HOPXQ9BPY8 73 aaPredicted RBP0.24□□□□□ -2.37
NEDD4-211ENST00000514893 LPAR5Q9H1C0 372 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 JPT1Q9UK76 154 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 LOC285556D6RIA3 1793 aa0.24□□□□□ -2.37
NEDD4-211ENST00000514893 TECPR2O15040 1411 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 PTPRDP23468 1912 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 MEGF8Q7Z7M0 2845 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 TRAV5A0A0B4J249 113 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 H3BQV1 296 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 GABARAPH6UMI1 98 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 FXYD1O00168 92 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 KPNA4O00629 521 aaPredicted RBP0.23□□□□□ -2.37
NEDD4-211ENST00000514893 SULT1C4O75897 302 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 RPS3P23396 243 aaKnown RBP eCLIP0.23□□□□□ -2.37
NEDD4-211ENST00000514893 G0S2P27469 103 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 SERPINB1P30740 379 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 IQCJQ1A5X6 159 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 TRIQKQ629K1 86 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 PPP1R2P3Q6NXS1 205 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 C3orf62Q6ZUJ4 267 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.23□□□□□ -2.37
NEDD4-211ENST00000514893 CLEC2BQ92478 149 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 SMR3AQ99954 134 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 FAM103A1Q9BTL3 118 aaKnown RBP0.23□□□□□ -2.37
NEDD4-211ENST00000514893 SH3BGRL3Q9H299 93 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 PLAC8Q9NZF1 115 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 UFC1Q9Y3C8 167 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 ASB4Q9Y574 426 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 ASCC3Q8N3C0 2202 aaKnown RBP0.23□□□□□ -2.37
NEDD4-211ENST00000514893 MED12Q93074 2177 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 TET1Q8NFU7 2136 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 TRPM1Q7Z4N2 1603 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 KCPQ6ZWJ8 1503 aa0.23□□□□□ -2.37
NEDD4-211ENST00000514893 RFX7Q2KHR2 1363 aa0.22□□□□□ -2.37
NEDD4-211ENST00000514893 DSPPQ9NZW4 1301 aa0.22□□□□□ -2.37
NEDD4-211ENST00000514893 K7EIL1 84 aa0.22□□□□□ -2.37
NEDD4-211ENST00000514893 TRACP01848 142 aa0.22□□□□□ -2.37
NEDD4-211ENST00000514893 PRH1P02810 166 aa0.22□□□□□ -2.37
NEDD4-211ENST00000514893 IL7P13232 177 aa0.22□□□□□ -2.37
NEDD4-211ENST00000514893 FOXA3P55318 350 aaPredicted RBP0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms