RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 GNPNAT1Q96EK6 184 aaPredicted RBP10.14□□□□□ -0.79
USP46-209ENST00000514536 CYTL1Q9NRR1 136 aa10.14□□□□□ -0.79
USP46-209ENST00000514536 M0R3E3 92 aa10.13□□□□□ -0.79
USP46-209ENST00000514536 DEFB4AO15263 64 aa10.13□□□□□ -0.79
USP46-209ENST00000514536 HMGB3O15347 200 aaKnown RBP10.13□□□□□ -0.79
USP46-209ENST00000514536 JTBO76095 146 aa10.13□□□□□ -0.79
USP46-209ENST00000514536 KCNRGQ8N5I3 272 aa10.13□□□□□ -0.79
USP46-209ENST00000514536 RPP25LQ8N5L8 163 aaKnown RBP10.13□□□□□ -0.79
USP46-209ENST00000514536 PPP1R14DQ9NXH3 145 aa10.13□□□□□ -0.79
USP46-209ENST00000514536 ZNF705EA8MWA4 302 aaPredicted RBP10.12□□□□□ -0.79
USP46-209ENST00000514536 C3orf84H3BNL1 204 aa10.12□□□□□ -0.79
USP46-209ENST00000514536 M0R2Z0 102 aa10.12□□□□□ -0.79
USP46-209ENST00000514536 MBP02144 154 aa10.12□□□□□ -0.79
USP46-209ENST00000514536 UBE2L3P68036 154 aaKnown RBP10.12□□□□□ -0.79
USP46-209ENST00000514536 ZNF345Q14585 488 aa10.12□□□□□ -0.79
USP46-209ENST00000514536 ICAM4Q14773 271 aa10.12□□□□□ -0.79
USP46-209ENST00000514536 SPINK13Q1W4C9 94 aa10.12□□□□□ -0.79
USP46-209ENST00000514536 OR10J6PQ8NGY7 276 aa10.12□□□□□ -0.79
USP46-209ENST00000514536 ARPC5LQ9BPX5 153 aa10.12□□□□□ -0.79
USP46-209ENST00000514536 AAMDCQ9H7C9 122 aa10.12□□□□□ -0.79
USP46-209ENST00000514536 PRELID1Q9Y255 219 aa10.12□□□□□ -0.79
USP46-209ENST00000514536 X6R8D5 127 aa10.12□□□□□ -0.79
USP46-209ENST00000514536 IGHV3OR16-12A0A075B7B8 117 aa10.11□□□□□ -0.79
USP46-209ENST00000514536 A0A0D9SG52 128 aa10.11□□□□□ -0.79
USP46-209ENST00000514536 CDC34P49427 236 aaPredicted RBP10.11□□□□□ -0.79
USP46-209ENST00000514536 RANP62826 216 aaKnown RBP10.11□□□□□ -0.79
USP46-209ENST00000514536 ZFAND6Q6FIF0 208 aa10.11□□□□□ -0.79
USP46-209ENST00000514536 MRPL53Q96EL3 112 aaKnown RBP10.11□□□□□ -0.79
USP46-209ENST00000514536 PHYHIPLQ96FC7 376 aa10.11□□□□□ -0.79
USP46-209ENST00000514536 PQLC2Q6ZP29 291 aa10.1□□□□□ -0.79
USP46-209ENST00000514536 RAB24Q969Q5 203 aa10.1□□□□□ -0.79
USP46-209ENST00000514536 ACTR3CQ9C0K3 210 aaPredicted RBP10.1□□□□□ -0.79
USP46-209ENST00000514536 TRAV12-2A0A075B6T6 113 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 IGHV4-28A0A0C4DH34 117 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 BOLA2-SMG1P6H3BVE0 249 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 CRXO43186 299 aaPredicted RBP10.09□□□□□ -0.79
USP46-209ENST00000514536 AMBPP02760 352 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 RBMY1A1P0DJD3 496 aaKnown RBP10.09□□□□□ -0.79
USP46-209ENST00000514536 RBMY1CP0DJD4 496 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 MIFP14174 115 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 RBMY1FQ15415 496 aaKnown RBP10.09□□□□□ -0.79
USP46-209ENST00000514536 ZNF705AQ6ZN79 300 aaPredicted RBP10.09□□□□□ -0.79
USP46-209ENST00000514536 TCTE3Q8IZS6 198 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 C1orf158Q8N1D5 194 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 Q8NAQ8 132 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 IL17DQ8TAD2 202 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 IGF2BP2-AS1Q96M15 143 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 GOLT1BQ9Y3E0 138 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 KANTRA0A1W2PQU2 76 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 STAG3L2P0CL84 134 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 STAG3L3P0CL85 134 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 ARL14EPLP0DKL9 152 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 ERCC8Q13216 396 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 CASC10Q5T4H9 136 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 BAP18Q8IXM2 172 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 LYPD1Q8N2G4 141 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 Q9H3A6 140 aa10.09□□□□□ -0.79
USP46-209ENST00000514536 C11orf68Q9H3H3 251 aaKnown RBP10.09□□□□□ -0.79
USP46-209ENST00000514536 NPIPB6E9PJ23 425 aa10.08□□□□□ -0.8
USP46-209ENST00000514536 BCL2L11O43521 198 aa10.08□□□□□ -0.8
USP46-209ENST00000514536 CT45A10P0DMU9 189 aa10.08□□□□□ -0.8
USP46-209ENST00000514536 AKR1C8PQ5T2L2 129 aa10.08□□□□□ -0.8
USP46-209ENST00000514536 TMUB2Q71RG4 321 aa10.08□□□□□ -0.8
USP46-209ENST00000514536 TMEM208Q9BTX3 173 aa10.08□□□□□ -0.8
USP46-209ENST00000514536 ZNF471Q9BX82 626 aaPredicted RBP10.08□□□□□ -0.8
USP46-209ENST00000514536 PGPA6NDG6 321 aa10.07□□□□□ -0.8
USP46-209ENST00000514536 PFDN1O60925 122 aa10.07□□□□□ -0.8
USP46-209ENST00000514536 INSP01308 110 aa10.07□□□□□ -0.8
USP46-209ENST00000514536 CDKN1BP46527 198 aa10.07□□□□□ -0.8
USP46-209ENST00000514536 SSX7Q7RTT5 188 aa10.07□□□□□ -0.8
USP46-209ENST00000514536 AKAP14Q86UN6 197 aa10.07□□□□□ -0.8
USP46-209ENST00000514536 NEU1Q99519 415 aa10.07□□□□□ -0.8
USP46-209ENST00000514536 AGPAT4-IT1Q9H0P7 198 aa10.07□□□□□ -0.8
USP46-209ENST00000514536 IGKV2-40A0A087WW87 121 aaPredicted RBP10.06□□□□□ -0.8
USP46-209ENST00000514536 A0A1B0GVG6 124 aa10.06□□□□□ -0.8
USP46-209ENST00000514536 SMIM9A6NGZ8 99 aa10.06□□□□□ -0.8
USP46-209ENST00000514536 IGKV2D-40P01614 121 aaPredicted RBP10.06□□□□□ -0.8
USP46-209ENST00000514536 GCHFRP30047 84 aa10.06□□□□□ -0.8
USP46-209ENST00000514536 TSPOP30536 169 aa10.06□□□□□ -0.8
USP46-209ENST00000514536 CSN1S1P47710 185 aa10.06□□□□□ -0.8
USP46-209ENST00000514536 KIR3DS1Q14943 382 aa10.06□□□□□ -0.8
USP46-209ENST00000514536 ZNF726P1Q15940 193 aa10.06□□□□□ -0.8
USP46-209ENST00000514536 LGALSLQ3ZCW2 172 aaPredicted RBP10.06□□□□□ -0.8
USP46-209ENST00000514536 C11orf45Q8TAV5 145 aa10.06□□□□□ -0.8
USP46-209ENST00000514536 HYLS1Q96M11 299 aa10.06□□□□□ -0.8
USP46-209ENST00000514536 LINC00477Q96M19 166 aa10.06□□□□□ -0.8
USP46-209ENST00000514536 J3KRW8 73 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 CXorf1O96002 111 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 C1QBP02746 253 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 PRM2P04554 102 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 PMS2P11Q13670 270 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 VGLL1Q99990 258 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 OTORQ9NRC9 128 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 CTXND1A0A1B0GTU2 59 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 CXorf65A6NEN9 183 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 HBE1P02100 147 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 LEPP41159 167 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 NANOS2P60321 138 aaKnown RBP10.05□□□□□ -0.8
USP46-209ENST00000514536 CD300CQ08708 224 aa10.05□□□□□ -0.8
USP46-209ENST00000514536 C9orf47Q6ZRZ4 202 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms