RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 LRRC18Q8N456 261 aa0.38□□□□□ -2.35
TRAPPC11-210ENST00000513600 FAM24BQ8N5W8 94 aa0.38□□□□□ -2.35
TRAPPC11-210ENST00000513600 FAM216BQ8N7L0 139 aa0.38□□□□□ -2.35
TRAPPC11-210ENST00000513600 ISOC1Q96CN7 298 aa0.38□□□□□ -2.35
TRAPPC11-210ENST00000513600 ZC2HC1AQ96GY0 325 aa0.38□□□□□ -2.35
TRAPPC11-210ENST00000513600 GGACTQ9BVM4 153 aa0.38□□□□□ -2.35
TRAPPC11-210ENST00000513600 TMEM138Q9NPI0 162 aa0.38□□□□□ -2.35
TRAPPC11-210ENST00000513600 OTORQ9NRC9 128 aa0.38□□□□□ -2.35
TRAPPC11-210ENST00000513600 RNF11Q9Y3C5 154 aa0.38□□□□□ -2.35
TRAPPC11-210ENST00000513600 ZFC3H1O60293 1989 aaKnown RBP0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 FANCMQ8IYD8 2048 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 MAP1LC3B2A6NCE7 125 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 KPNA4O00629 521 aaPredicted RBP0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 PFDN1O60925 122 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 KLF7O75840 302 aaPredicted RBP0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 IGHV3-33P01772 117 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 EFNA4P52798 201 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 EIF3IQ13347 325 aaKnown RBP0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 CIRBPQ14011 172 aaKnown RBP0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 TMEM78Q5T7P6 136 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 DCUN1D2Q6PH85 259 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 PSMF1Q92530 271 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 CARD19Q96LW7 228 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 MCEEQ96PE7 176 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 PCBD2Q9H0N5 130 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 TCEAL2Q9H3H9 227 aaPredicted RBP0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 CENPHQ9H3R5 247 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 LRTM1Q9HBL6 345 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 MED11Q9P086 117 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 NAT8BQ9UHF3 227 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 ATPIF1Q9UII2 106 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 HSPB8Q9UJY1 196 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 NUP210LQ5VU65 1888 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 CITO14578 2027 aa0.37□□□□□ -2.35
TRAPPC11-210ENST00000513600 SYNMO15061 1565 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 USP24Q9UPU5 2620 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 PEAK1Q9H792 1746 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 TRDV1A0A1B0GX56 115 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 A0A1W2PPM0 123 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 JMJD7-PLA2G4BH0Y9G9 81 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 FABP1P07148 127 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 BCL2P10415 239 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 MRPS36P82909 103 aaKnown RBP0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 LINC00575Q6W349 94 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 ANGPTL5Q86XS5 388 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 STX12Q86Y82 276 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 CCL4L1Q8NHW4 92 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 DYDC1Q8WWB3 177 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 DIRC1Q969H9 104 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 BORCS8Q96FH0 119 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 CCDC32Q9BV29 185 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 SMPXQ9UHP9 88 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 LAMTOR2Q9Y2Q5 125 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 V9GYQ6 96 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 TRAPPC8Q9Y2L5 1435 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 E9PCH4 1651 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 ADGBQ8N7X0 1667 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 SIP14410 1827 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 FRMPD1Q5SYB0 1578 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 ASH1LQ9NR48 2969 aaKnown RBP0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 MYO7AQ13402 2215 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 TANC2Q9HCD6 1990 aa0.36□□□□□ -2.35
TRAPPC11-210ENST00000513600 MGAMO43451 1857 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 ABCA4P78363 2273 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 ZCCHC11Q5TAX3 1644 aaKnown RBP0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 MUC5ACP98088 5654 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 A0A096LPI6 279 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 A0A1W2PRE2 83 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 C9orf170A2RU37 121 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 E7EQ34 232 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 C5orf67F2Z3F1 127 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 H7BYZ3 331 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 PPYP01298 95 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 IGLV3-1P01715 115 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 FABP4P15090 132 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 NDUFA6P56556 154 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 TFAMQ00059 246 aaKnown RBP0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 MIR22HGQ0VDD5 57 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 SPATA45Q537H7 98 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 FOXI2Q6ZQN5 318 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 LINC00269Q8N2A0 174 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 OR4B1Q8NGF8 309 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 OR10AC1Q8NH08 325 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 OR4C12Q96R67 309 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 CST11Q9H112 138 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 TPRKBQ9Y3C4 175 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 KIAA0100Q14667 2235 aaKnown RBP0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 TECPR2O15040 1411 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 KIAA1107Q9UPP5 1409 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 COL24A1Q17RW2 1714 aa0.35□□□□□ -2.35
TRAPPC11-210ENST00000513600 PIK3C2AO00443 1686 aa0.34□□□□□ -2.35
TRAPPC11-210ENST00000513600 A0A0J9YY99 117 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 A0A1B0GV72 72 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 GABARAPH6UMI1 98 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 FAM107AO95990 144 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 TRACP01848 142 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 MT-ND6P03923 174 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 FABP2P12104 132 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 S100A11P31949 105 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms