RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 CDKN1BP46527 198 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 GFI1BQ5VTD9 330 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 PATE2Q6UY27 113 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 ZNF493Q6ZR52 646 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 CYP2G1PQ6ZSU1 146 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 LYPD1Q8N2G4 141 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 VSIG2Q96IQ7 327 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 TMPRSS5Q9H3S3 457 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 NPVFQ9HCQ7 196 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 HIGD1AQ9Y241 93 aa6.62□□□□□ -1.35
TCOF1-212ENST00000513538 TRAV6A0A075B6T7 132 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 A0A096LPF7 62 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 GAGE12BA1L429 117 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 PRAC2D3DTV9 90 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 H7BYZ3 331 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 GAGE7O76087 117 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 IL5P05113 134 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 SNRPCP09234 159 aaKnown RBP6.61□□□□□ -1.35
TCOF1-212ENST00000513538 METTL15P1P0C7V9 234 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 LINC00869P0C866 280 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 GAGE12FP0CL80 117 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 GAGE12GP0CL81 117 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 GAGE12IP0CL82 117 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 Q5VSD8 79 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 OR10J6PQ8NGY7 276 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 ZNF431Q8TF32 576 aaPredicted RBP6.61□□□□□ -1.35
TCOF1-212ENST00000513538 RPUSD4Q96CM3 377 aaKnown RBP6.61□□□□□ -1.35
TCOF1-212ENST00000513538 SEC22CQ9BRL7 303 aa6.61□□□□□ -1.35
TCOF1-212ENST00000513538 SMCO3A2RU48 225 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 SLC17A3O00476 420 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 CCSO14618 274 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 HYPMO75409 117 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 OR5G3P0C626 314 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 KRTAP10-1P60331 282 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 RAP2BP61225 183 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 SELENOTP62341 195 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 Q6ZTI0 123 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 OR10P1Q8NGE3 313 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 GGACTQ9BVM4 153 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 NUDT15Q9NV35 164 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 PPP1R14DQ9NXH3 145 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 GSKIPQ9P0R6 139 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 TNFRSF18Q9Y5U5 241 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 FAT1Q14517 4588 aa6.6□□□□□ -1.35
TCOF1-212ENST00000513538 H3BNG1 76 aa6.59□□□□□ -1.35
TCOF1-212ENST00000513538 H3BTX0 84 aa6.59□□□□□ -1.35
TCOF1-212ENST00000513538 SCGB1D2O95969 90 aa6.59□□□□□ -1.35
TCOF1-212ENST00000513538 RLN2P04090 185 aa6.59□□□□□ -1.35
TCOF1-212ENST00000513538 H2AFB2P0C5Z0 115 aa6.59□□□□□ -1.35
TCOF1-212ENST00000513538 DNAH10OSP0CZ25 163 aa6.59□□□□□ -1.35
TCOF1-212ENST00000513538 RRAS2P62070 204 aaPredicted RBP6.59□□□□□ -1.35
TCOF1-212ENST00000513538 IFITM3Q01628 133 aa6.59□□□□□ -1.35
TCOF1-212ENST00000513538 ASAH1Q13510 395 aa6.59□□□□□ -1.35
TCOF1-212ENST00000513538 MORN5Q5VZ52 161 aa6.59□□□□□ -1.35
TCOF1-212ENST00000513538 TEPPQ6URK8 271 aa6.59□□□□□ -1.35
TCOF1-212ENST00000513538 S100A7AQ86SG5 101 aa6.59□□□□□ -1.35
TCOF1-212ENST00000513538 C12orf45Q8N5I9 185 aaPredicted RBP6.59□□□□□ -1.35
TCOF1-212ENST00000513538 C2orf50Q96LR7 162 aa6.59□□□□□ -1.35
TCOF1-212ENST00000513538 C20orf144Q9BQM9 153 aa6.59□□□□□ -1.35
TCOF1-212ENST00000513538 ZNF331Q9NQX6 463 aaPredicted RBP6.59□□□□□ -1.35
TCOF1-212ENST00000513538 J3KRW8 73 aa6.58□□□□□ -1.36
TCOF1-212ENST00000513538 SLC38A11Q08AI6 406 aa6.58□□□□□ -1.36
TCOF1-212ENST00000513538 VWC2Q2TAL6 325 aa6.58□□□□□ -1.36
TCOF1-212ENST00000513538 PXDC1Q5TGL8 231 aa6.58□□□□□ -1.36
TCOF1-212ENST00000513538 C11orf72Q8NBR9 251 aa6.58□□□□□ -1.36
TCOF1-212ENST00000513538 LRRC20Q8TCA0 184 aa6.58□□□□□ -1.36
TCOF1-212ENST00000513538 S100ZQ8WXG8 99 aa6.58□□□□□ -1.36
TCOF1-212ENST00000513538 TMEM37Q8WXS4 190 aa6.58□□□□□ -1.36
TCOF1-212ENST00000513538 MGST2Q99735 147 aa6.58□□□□□ -1.36
TCOF1-212ENST00000513538 ARL6Q9H0F7 186 aa6.58□□□□□ -1.36
TCOF1-212ENST00000513538 ARV1Q9H2C2 271 aa6.58□□□□□ -1.36
TCOF1-212ENST00000513538 TRAV12-3A0A0B4J271 114 aa6.57□□□□□ -1.36
TCOF1-212ENST00000513538 FAM240BA0A1B0GVZ2 78 aa6.57□□□□□ -1.36
TCOF1-212ENST00000513538 FAM24AA6NFZ4 105 aa6.57□□□□□ -1.36
TCOF1-212ENST00000513538 SNURFLB1AK76 121 aa6.57□□□□□ -1.36
TCOF1-212ENST00000513538 AGPAT2O15120 278 aa6.57□□□□□ -1.36
TCOF1-212ENST00000513538 CT45A10P0DMU9 189 aa6.57□□□□□ -1.36
TCOF1-212ENST00000513538 CXCL2P19875 107 aa6.57□□□□□ -1.36
TCOF1-212ENST00000513538 LCN15Q6UWW0 184 aa6.57□□□□□ -1.36
TCOF1-212ENST00000513538 CCDC28AQ8IWP9 274 aa6.57□□□□□ -1.36
TCOF1-212ENST00000513538 SLC50A1Q9BRV3 221 aa6.57□□□□□ -1.36
TCOF1-212ENST00000513538 MDFICQ9P1T7 246 aa6.57□□□□□ -1.36
TCOF1-212ENST00000513538 MGAT4CQ9UBM8 478 aa6.57□□□□□ -1.36
TCOF1-212ENST00000513538 RNF24Q9Y225 148 aa6.57□□□□□ -1.36
TCOF1-212ENST00000513538 LSM5Q9Y4Y9 91 aaKnown RBP6.57□□□□□ -1.36
TCOF1-212ENST00000513538 A0A087WTM6 91 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 H3BQ15 152 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 SIVA1O15304 175 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 UPK1BO75841 260 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 NXPH4O95158 308 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 IGLC2P0DOY2 106 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 HAMPP81172 84 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 DAZ2Q13117 558 aaKnown RBP6.56□□□□□ -1.36
TCOF1-212ENST00000513538 RAB32Q13637 225 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 ZNF846Q147U1 533 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 CDPF1Q6NVV7 123 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 LINC00305Q7Z4B0 112 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 ZNF546Q86UE3 836 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 TMEM252Q8N6L7 170 aa6.56□□□□□ -1.36
TCOF1-212ENST00000513538 CHAC2Q8WUX2 184 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms