RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 IGKV1D-39P04432 117 aa2.53□□□□□ -2
NUP54-212ENST00000513248 CD5P06127 495 aa2.53□□□□□ -2
NUP54-212ENST00000513248 FABP1P07148 127 aa2.53□□□□□ -2
NUP54-212ENST00000513248 RBMY1DP0C7P1 496 aaKnown RBP2.53□□□□□ -2
NUP54-212ENST00000513248 RNASE2P10153 161 aaKnown RBP2.53□□□□□ -2
NUP54-212ENST00000513248 NPY1RP25929 384 aa2.53□□□□□ -2
NUP54-212ENST00000513248 CCR6P51684 374 aa2.53□□□□□ -2
NUP54-212ENST00000513248 RND2P52198 227 aa2.53□□□□□ -2
NUP54-212ENST00000513248 RAB11AP62491 216 aa2.53□□□□□ -2
NUP54-212ENST00000513248 SMCO1Q147U7 214 aa2.53□□□□□ -2
NUP54-212ENST00000513248 SPANXN2Q5MJ10 180 aa2.53□□□□□ -2
NUP54-212ENST00000513248 LHFPL1Q86WI0 220 aa2.53□□□□□ -2
NUP54-212ENST00000513248 SELENOHQ8IZQ5 122 aaKnown RBP2.53□□□□□ -2
NUP54-212ENST00000513248 CEND1Q8N111 149 aa2.53□□□□□ -2
NUP54-212ENST00000513248 STXBP6Q8NFX7 210 aa2.53□□□□□ -2
NUP54-212ENST00000513248 DYNC2LI1Q8TCX1 351 aa2.53□□□□□ -2
NUP54-212ENST00000513248 GPR146Q96CH1 333 aa2.53□□□□□ -2
NUP54-212ENST00000513248 ACY3Q96HD9 319 aa2.53□□□□□ -2
NUP54-212ENST00000513248 SLC35E1Q96K37 410 aa2.53□□□□□ -2
NUP54-212ENST00000513248 METTL26Q96S19 204 aa2.53□□□□□ -2
NUP54-212ENST00000513248 KIR2DL4Q99706 377 aa2.53□□□□□ -2
NUP54-212ENST00000513248 PBDC1Q9BVG4 233 aa2.53□□□□□ -2
NUP54-212ENST00000513248 NXF2Q9GZY0 626 aaKnown RBP2.53□□□□□ -2
NUP54-212ENST00000513248 SMPXQ9UHP9 88 aa2.53□□□□□ -2
NUP54-212ENST00000513248 PUS1Q9Y606 427 aaKnown RBP eCLIP2.53□□□□□ -2
NUP54-212ENST00000513248 TENM3Q9P273 2699 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 A0A0G2JRQ6 117 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 SMCO3A2RU48 225 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 ZFP92A6NM28 416 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 I3L2K1 104 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 RTL8CO15255 209 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 GSTZ1O43708 216 aaPredicted RBP2.52□□□□□ -2.01
NUP54-212ENST00000513248 MED6O75586 246 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 CDS2O95674 445 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 TMEM50AO95807 157 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 CA1P00915 261 aaPredicted RBP2.52□□□□□ -2.01
NUP54-212ENST00000513248 IFNA21P01568 189 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 CTSGP08311 255 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 C8orf88P0DMB2 117 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 IAPPP10997 89 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 SLC25A4P12235 298 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 OR10J1P30954 320 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 P2RY1P47900 373 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 AP2S1P53680 142 aaPredicted RBP2.52□□□□□ -2.01
NUP54-212ENST00000513248 DEFB131AP59861 70 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 DHRS2Q13268 280 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 DEFB135Q30KP9 77 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 TIGITQ495A1 244 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 CASC10Q5T4H9 136 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 TOMM20LQ6UXN7 152 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 APRG1Q8IVJ8 170 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 OR1S2Q8NGQ3 325 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 OR52E5Q8NH55 327 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 COQ8AQ8NI60 647 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 RNASEH2CQ8TDP1 164 aaKnown RBP2.52□□□□□ -2.01
NUP54-212ENST00000513248 DTD1Q8TEA8 209 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 GLYATL2Q8WU03 294 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 IL22RA2Q969J5 263 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 GALNT14Q96FL9 552 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 RNF2Q99496 336 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 RTBDNQ9BSG5 229 aaPredicted RBP2.52□□□□□ -2.01
NUP54-212ENST00000513248 RBKSQ9H477 322 aa2.52□□□□□ -2.01
NUP54-212ENST00000513248 A0A0B4J2A0 478 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 KIR2DL5BA0A0G2JN68 375 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 KIR2DL5BA0A0G2JPC4 375 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 HELTA6NFD8 242 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 SNRPGP15A8MWD9 76 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 L7N2F9 121 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 SERF1AO75920 110 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 IL4P05112 153 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 ZNF688P0C7X2 276 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 RD3LP0DJH9 198 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 S100A7P31151 101 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 NUP62P37198 522 aaPredicted RBP2.51□□□□□ -2.01
NUP54-212ENST00000513248 KRTAP10-1P60331 282 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 SNRPD3P62318 126 aaKnown RBP2.51□□□□□ -2.01
NUP54-212ENST00000513248 AKR1C1Q04828 323 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 TNFRSF9Q07011 255 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 OR2F1Q13607 317 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 ZNF846Q147U1 533 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 ZNF79Q15937 498 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 KLK9Q2XQG4 91 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 C2orf83Q53S99 150 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 TMEM128Q5BJH2 165 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 PSMG4Q5JS54 123 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 SPANXN5Q5MJ07 72 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 LYZL2Q7Z4W2 148 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 LYG2Q86SG7 212 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 KIR2DL5AQ8N109 375 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 OR4X1Q8NH49 305 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 KIR2DL5BQ8NHK3 375 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 LHFPL5Q8TAF8 219 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 CIB3Q96Q77 187 aaPredicted RBP2.51□□□□□ -2.01
NUP54-212ENST00000513248 RARRES2Q99969 163 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 SLC25A21Q9BQT8 299 aaPredicted RBP2.51□□□□□ -2.01
NUP54-212ENST00000513248 SLIRPQ9GZT3 109 aaKnown RBP2.51□□□□□ -2.01
NUP54-212ENST00000513248 MS4A6AQ9H2W1 248 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 SHPKQ9UHJ6 478 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 KLK9Q9UKQ9 250 aa2.51□□□□□ -2.01
NUP54-212ENST00000513248 TP53TG1Q9Y2A0 90 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms