RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 NBASA2RRP1 2371 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 NUP155O75694 1391 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 ABCA1O95477 2261 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 hCG_1818297A0A087WSY0 165 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 A0A0A6YYH2 397 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 ODAMA1E959 279 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 A6NJ64 397 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 A8MT66 165 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 A8MWV9 139 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 B4DSR2 109 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 NDUFB3O43676 98 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 DCTN3O75935 186 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 DEXIO95424 95 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 CALB1P05937 261 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 IFITM1P13164 125 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 ASIPP42127 132 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 ROMO1P60602 79 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 EIF3IQ13347 325 aaKnown RBP-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 MED21Q13503 144 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 C1orf134Q5TEV5 83 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 Q5VSD8 79 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 CD200R1LQ6Q8B3 271 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 FAM151BQ6UXP7 276 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 ANGPTL5Q86XS5 388 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 PDZD9Q8IXQ8 264 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 TMEM86BQ8N661 226 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 SLC25A40Q8TBP6 338 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 STAG3L4Q8TBR4 150 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 RMND5BQ96G75 393 aaPredicted RBP-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 LINC00467Q9BRT7 94 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 KIFC1Q9BW19 673 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 MRPS26Q9BYN8 205 aaKnown RBP-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 PROK2Q9HC23 129 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 HSPB8Q9UJY1 196 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 CDH23Q9H251 3354 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 RANBP2P49792 3224 aaKnown RBP-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 FRYLO94915 3013 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 KDM6BO15054 1643 aa-0.27□□□□□ -2.45
PDGFC-208ENST00000512711 UTRNP46939 3433 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 MYO5AQ9Y4I1 1855 aaKnown RBP-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 A0A096LPI6 279 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 TRGV10A0A0A0MS01 117 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 LOC107984156A0A0G2JMH3 177 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 FAM236DA0A1B0GTK5 79 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 PRORSD1PA6NEY8 169 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 J3QRK9 145 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 TGOLN2O43493 480 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 MT1BP07438 61 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 FAM236CP0DP71 79 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 PPIBP23284 216 aaKnown RBP-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 SRIP30626 198 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 RNASE4P34096 147 aaKnown RBP-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 CAV3P56539 151 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 AP3S2P59780 193 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 RPL37AP61513 92 aaKnown RBP-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 TMED1Q13445 227 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 KRR1Q13601 381 aaKnown RBP-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 HIST3H3Q16695 136 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 ACOT6Q3I5F7 207 aaPredicted RBP-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 ASB16-AS1Q495Z4 193 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 LYRM7Q5U5X0 104 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 ARL17AQ8IVW1 177 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 OR5AS1Q8N127 324 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 OR51A2Q8NGJ7 313 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 OR10AG1Q8NH19 301 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 CT55Q8WUE5 264 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 C8orf76Q96K31 380 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 C2orf50Q96LR7 162 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 CMSS1Q9BQ75 279 aaKnown RBP-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 LIMD2Q9BT23 127 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 C20orf27Q9GZN8 174 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 USE1Q9NZ43 259 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 MRPL27Q9P0M9 148 aaKnown RBP-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 DNAH12Q6ZR08 3092 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 ESPL1Q14674 2120 aa-0.28□□□□□ -2.45
PDGFC-208ENST00000512711 PTPRDP23468 1912 aa-0.28□□□□□ -2.46
PDGFC-208ENST00000512711 PLCE1Q9P212 2302 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 C9orf84Q5VXU9 1444 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 RBBP6Q7Z6E9 1792 aaKnown RBP-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 ROBO3Q96MS0 1386 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 ASPMQ8IZT6 3477 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 C10orf142B7Z368 130 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 C17orf112F2Z3M2 114 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 FXYD1O00168 92 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 CHP2O43745 196 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 CST8O60676 142 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 OR10J4P0C629 311 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 HIST1H1EP10412 219 aaKnown RBP-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 SULT1A1P50225 295 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 MYL5Q02045 173 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 SPINK13Q1W4C9 94 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 BCL2L15Q5TBC7 163 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 EIF5AL1Q6IS14 154 aaKnown RBP-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 S100A7AQ86SG5 101 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 OR4K15Q8NH41 348 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 POP5Q969H6 163 aaKnown RBP-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 PTH2Q96A98 100 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 PLEKHB2Q96CS7 222 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 ATP6V1G3Q96LB4 118 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms