RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 SMIM9A6NGZ8 99 aa11.47□□□□□ -0.57
DDX41-214ENST00000512334 OR7C2O60412 319 aa11.47□□□□□ -0.57
DDX41-214ENST00000512334 HBE1P02100 147 aa11.47□□□□□ -0.57
DDX41-214ENST00000512334 OR10J4P0C629 311 aa11.47□□□□□ -0.57
DDX41-214ENST00000512334 EMP1P54849 157 aa11.47□□□□□ -0.57
DDX41-214ENST00000512334 PDE6HQ13956 83 aa11.47□□□□□ -0.57
DDX41-214ENST00000512334 ACOT6Q3I5F7 207 aaPredicted RBP11.47□□□□□ -0.57
DDX41-214ENST00000512334 LCE6AA0A183 80 aa11.46□□□□□ -0.57
DDX41-214ENST00000512334 CRXO43186 299 aaPredicted RBP11.46□□□□□ -0.57
DDX41-214ENST00000512334 JTBO76095 146 aa11.46□□□□□ -0.57
DDX41-214ENST00000512334 NDUFB4O95168 129 aa11.46□□□□□ -0.57
DDX41-214ENST00000512334 NBEAP1P0C6P0 100 aa11.46□□□□□ -0.57
DDX41-214ENST00000512334 TAS2R45P59539 299 aa11.46□□□□□ -0.57
DDX41-214ENST00000512334 EXOC3-AS1Q8N2X6 119 aa11.46□□□□□ -0.57
DDX41-214ENST00000512334 HSD17B11Q8NBQ5 300 aa11.46□□□□□ -0.57
DDX41-214ENST00000512334 RNF141Q8WVD5 230 aa11.46□□□□□ -0.57
DDX41-214ENST00000512334 AAMDCQ9H7C9 122 aa11.46□□□□□ -0.57
DDX41-214ENST00000512334 TMEM189A5PLL7 270 aa11.45□□□□□ -0.58
DDX41-214ENST00000512334 M0R3E3 92 aa11.45□□□□□ -0.58
DDX41-214ENST00000512334 M6PRP20645 277 aa11.45□□□□□ -0.58
DDX41-214ENST00000512334 CDKN1BP46527 198 aa11.45□□□□□ -0.58
DDX41-214ENST00000512334 RRN3P1Q2M238 152 aa11.45□□□□□ -0.58
DDX41-214ENST00000512334 KHDC3LQ587J8 217 aa11.45□□□□□ -0.58
DDX41-214ENST00000512334 FXYD5Q96DB9 178 aa11.45□□□□□ -0.58
DDX41-214ENST00000512334 MRPL53Q96EL3 112 aaKnown RBP11.45□□□□□ -0.58
DDX41-214ENST00000512334 CELA1Q9UNI1 258 aa11.45□□□□□ -0.58
DDX41-214ENST00000512334 PRELID1Q9Y255 219 aa11.45□□□□□ -0.58
DDX41-214ENST00000512334 LOC102723971A0A1B0GUV8 181 aa11.44□□□□□ -0.58
DDX41-214ENST00000512334 A0A1W2PPV4 95 aa11.44□□□□□ -0.58
DDX41-214ENST00000512334 EIF3GO75821 320 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDX41-214ENST00000512334 RAB2AP61019 212 aa11.44□□□□□ -0.58
DDX41-214ENST00000512334 UBE2L3P68036 154 aaKnown RBP11.44□□□□□ -0.58
DDX41-214ENST00000512334 ICAM4Q14773 271 aa11.44□□□□□ -0.58
DDX41-214ENST00000512334 FAM122CQ6P4D5 195 aa11.44□□□□□ -0.58
DDX41-214ENST00000512334 ZNF767PQ75MW2 155 aa11.44□□□□□ -0.58
DDX41-214ENST00000512334 RPP25LQ8N5L8 163 aaKnown RBP11.44□□□□□ -0.58
DDX41-214ENST00000512334 TNFSF18Q9UNG2 199 aa11.44□□□□□ -0.58
DDX41-214ENST00000512334 DYNC2H1Q8NCM8 4307 aaKnown RBP11.44□□□□□ -0.58
DDX41-214ENST00000512334 RNF222A6NCQ9 220 aa11.43□□□□□ -0.58
DDX41-214ENST00000512334 ZNF705GA8MUZ8 300 aaPredicted RBP11.43□□□□□ -0.58
DDX41-214ENST00000512334 TSPOP30536 169 aa11.43□□□□□ -0.58
DDX41-214ENST00000512334 Q6ZTC4 211 aa11.43□□□□□ -0.58
DDX41-214ENST00000512334 OR10G4Q8NGN3 311 aa11.43□□□□□ -0.58
DDX41-214ENST00000512334 OR10G9Q8NGN4 311 aa11.43□□□□□ -0.58
DDX41-214ENST00000512334 OR10G7Q8NGN6 311 aa11.43□□□□□ -0.58
DDX41-214ENST00000512334 ZNF503Q96F45 646 aa11.43□□□□□ -0.58
DDX41-214ENST00000512334 PHYHIPLQ96FC7 376 aa11.43□□□□□ -0.58
DDX41-214ENST00000512334 LINC01587Q99440 93 aa11.43□□□□□ -0.58
DDX41-214ENST00000512334 TENM2Q9NT68 2774 aa11.42□□□□□ -0.58
DDX41-214ENST00000512334 C11orf94C9JXX5 98 aa11.42□□□□□ -0.58
DDX41-214ENST00000512334 NPIPB6E9PJ23 425 aa11.42□□□□□ -0.58
DDX41-214ENST00000512334 SMLR1H3BR10 107 aa11.42□□□□□ -0.58
DDX41-214ENST00000512334 J3KRW8 73 aa11.42□□□□□ -0.58
DDX41-214ENST00000512334 SPART-AS1P0CW21 52 aa11.42□□□□□ -0.58
DDX41-214ENST00000512334 CT45A10P0DMU9 189 aa11.42□□□□□ -0.58
DDX41-214ENST00000512334 ATP6V0CP27449 155 aa11.42□□□□□ -0.58
DDX41-214ENST00000512334 ERCC8Q13216 396 aa11.42□□□□□ -0.58
DDX41-214ENST00000512334 RYR3Q15413 4870 aa11.42□□□□□ -0.58
DDX41-214ENST00000512334 SACSQ9NZJ4 4579 aa11.42□□□□□ -0.58
DDX41-214ENST00000512334 BORCS7-ASMTA0A0B4J1R7 106 aa11.41□□□□□ -0.58
DDX41-214ENST00000512334 G3V3Q6 166 aa11.41□□□□□ -0.58
DDX41-214ENST00000512334 HMGB3O15347 200 aaKnown RBP11.41□□□□□ -0.58
DDX41-214ENST00000512334 ARPC5O15511 151 aa11.41□□□□□ -0.58
DDX41-214ENST00000512334 PRM2P04554 102 aa11.41□□□□□ -0.58
DDX41-214ENST00000512334 HTN1P15515 57 aa11.41□□□□□ -0.58
DDX41-214ENST00000512334 LEPP41159 167 aa11.41□□□□□ -0.58
DDX41-214ENST00000512334 RANP62826 216 aaKnown RBP11.41□□□□□ -0.58
DDX41-214ENST00000512334 KIR3DS1Q14943 382 aa11.41□□□□□ -0.58
DDX41-214ENST00000512334 C12orf74Q32Q52 190 aa11.41□□□□□ -0.58
DDX41-214ENST00000512334 RPL7L1Q6DKI1 246 aaKnown RBP11.41□□□□□ -0.58
DDX41-214ENST00000512334 TMEM256Q8N2U0 113 aa11.41□□□□□ -0.58
DDX41-214ENST00000512334 C2CD4CQ8TF44 421 aa11.41□□□□□ -0.58
DDX41-214ENST00000512334 PSMG3Q9BT73 122 aaPredicted RBP11.41□□□□□ -0.58
DDX41-214ENST00000512334 YTHDF2Q9Y5A9 579 aaKnown RBP11.41□□□□□ -0.58
DDX41-214ENST00000512334 IGKV2-40A0A087WW87 121 aaPredicted RBP11.4□□□□□ -0.58
DDX41-214ENST00000512334 TRAV10A0A0B4J240 114 aa11.4□□□□□ -0.58
DDX41-214ENST00000512334 IGKV2D-40P01614 121 aaPredicted RBP11.4□□□□□ -0.58
DDX41-214ENST00000512334 CSN1S1P47710 185 aa11.4□□□□□ -0.58
DDX41-214ENST00000512334 CDC34P49427 236 aaPredicted RBP11.4□□□□□ -0.58
DDX41-214ENST00000512334 FAM222AQ5U5X8 452 aa11.4□□□□□ -0.58
DDX41-214ENST00000512334 OR2G3Q8NGZ4 309 aa11.4□□□□□ -0.58
DDX41-214ENST00000512334 ODF3Q96PU9 254 aa11.4□□□□□ -0.58
DDX41-214ENST00000512334 SH3BGRL3Q9H299 93 aa11.4□□□□□ -0.58
DDX41-214ENST00000512334 Q9H3A6 140 aa11.4□□□□□ -0.58
DDX41-214ENST00000512334 TEX48A0A1B0GUV7 120 aa11.39□□□□□ -0.59
DDX41-214ENST00000512334 IGLL5B9A064 214 aa11.39□□□□□ -0.59
DDX41-214ENST00000512334 MBP02144 154 aa11.39□□□□□ -0.59
DDX41-214ENST00000512334 TAS2R60P59551 318 aa11.39□□□□□ -0.59
DDX41-214ENST00000512334 GFI1BQ5VTD9 330 aa11.39□□□□□ -0.59
DDX41-214ENST00000512334 PQLC2Q6ZP29 291 aa11.39□□□□□ -0.59
DDX41-214ENST00000512334 LINC00477Q96M19 166 aa11.39□□□□□ -0.59
DDX41-214ENST00000512334 AGPAT4-IT1Q9H0P7 198 aa11.39□□□□□ -0.59
DDX41-214ENST00000512334 DKK2Q9UBU2 259 aa11.39□□□□□ -0.59
DDX41-214ENST00000512334 PLECQ15149 4684 aaKnown RBP11.39□□□□□ -0.59
DDX41-214ENST00000512334 H7BYZ3 331 aa11.38□□□□□ -0.59
DDX41-214ENST00000512334 LY6G6CO95867 125 aa11.38□□□□□ -0.59
DDX41-214ENST00000512334 SERF2P84101 59 aa11.38□□□□□ -0.59
DDX41-214ENST00000512334 TMEM78Q5T7P6 136 aa11.38□□□□□ -0.59
DDX41-214ENST00000512334 LYPD1Q8N2G4 141 aa11.38□□□□□ -0.59
DDX41-214ENST00000512334 GNPNAT1Q96EK6 184 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms