RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 MPDU1O75352 247 aa9.48□□□□□ -0.89
RNF4-215ENST00000511843 AMBPP02760 352 aa9.48□□□□□ -0.89
RNF4-215ENST00000511843 AZU1P20160 251 aa9.48□□□□□ -0.89
RNF4-215ENST00000511843 LGALS9CQ6DKI2 356 aa9.48□□□□□ -0.89
RNF4-215ENST00000511843 MIR17HGQ75NE6 70 aa9.48□□□□□ -0.89
RNF4-215ENST00000511843 MBD2Q9UBB5 411 aa9.48□□□□□ -0.89
RNF4-215ENST00000511843 VPS13DQ5THJ4 4388 aa9.47□□□□□ -0.89
RNF4-215ENST00000511843 HTN3P15516 51 aa9.47□□□□□ -0.89
RNF4-215ENST00000511843 BLNKQ8WV28 456 aa9.47□□□□□ -0.89
RNF4-215ENST00000511843 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
RNF4-215ENST00000511843 WDR61Q9GZS3 305 aaKnown RBP9.47□□□□□ -0.89
RNF4-215ENST00000511843 HSPB11Q9Y547 144 aa9.47□□□□□ -0.89
RNF4-215ENST00000511843 TRBV19A0A075B6N1 114 aa9.46□□□□□ -0.9
RNF4-215ENST00000511843 J3KRW8 73 aa9.46□□□□□ -0.9
RNF4-215ENST00000511843 M0R3E3 92 aa9.46□□□□□ -0.9
RNF4-215ENST00000511843 NDUFB4O95168 129 aa9.46□□□□□ -0.9
RNF4-215ENST00000511843 HTN1P15515 57 aa9.46□□□□□ -0.9
RNF4-215ENST00000511843 OR10J6PQ8NGY7 276 aa9.46□□□□□ -0.9
RNF4-215ENST00000511843 FAM167A-AS1Q96KT0 104 aa9.46□□□□□ -0.9
RNF4-215ENST00000511843 ATP5SQ99766 215 aa9.46□□□□□ -0.9
RNF4-215ENST00000511843 NIPSNAP3BQ9BS92 247 aa9.46□□□□□ -0.9
RNF4-215ENST00000511843 KMT2AQ03164 3969 aa9.46□□□□□ -0.9
RNF4-215ENST00000511843 EIF3GO75821 320 aaKnown RBP eCLIP9.45□□□□□ -0.9
RNF4-215ENST00000511843 PET100P0DJ07 73 aa9.45□□□□□ -0.9
RNF4-215ENST00000511843 RPL12P30050 165 aaKnown RBP9.45□□□□□ -0.9
RNF4-215ENST00000511843 CDKN1BP46527 198 aa9.45□□□□□ -0.9
RNF4-215ENST00000511843 ERCC8Q13216 396 aa9.45□□□□□ -0.9
RNF4-215ENST00000511843 FCN2Q15485 313 aa9.45□□□□□ -0.9
RNF4-215ENST00000511843 GUK1Q16774 197 aa9.45□□□□□ -0.9
RNF4-215ENST00000511843 EXOC3-AS1Q8N2X6 119 aa9.45□□□□□ -0.9
RNF4-215ENST00000511843 LINC01587Q99440 93 aa9.45□□□□□ -0.9
RNF4-215ENST00000511843 WFDC1Q9HC57 220 aa9.45□□□□□ -0.9
RNF4-215ENST00000511843 TMEM14CQ9P0S9 112 aa9.45□□□□□ -0.9
RNF4-215ENST00000511843 PLAC8L1A1L4L8 177 aa9.44□□□□□ -0.9
RNF4-215ENST00000511843 PTTG1O95997 202 aa9.44□□□□□ -0.9
RNF4-215ENST00000511843 OR10J4P0C629 311 aa9.44□□□□□ -0.9
RNF4-215ENST00000511843 CT45A10P0DMU9 189 aa9.44□□□□□ -0.9
RNF4-215ENST00000511843 HIST1H1EP10412 219 aaKnown RBP9.44□□□□□ -0.9
RNF4-215ENST00000511843 TCTAP57738 103 aa9.44□□□□□ -0.9
RNF4-215ENST00000511843 TIMM9Q9Y5J7 89 aa9.44□□□□□ -0.9
RNF4-215ENST00000511843 BIRC6Q9NR09 4857 aa9.44□□□□□ -0.9
RNF4-215ENST00000511843 NPIPB6E9PJ23 425 aa9.43□□□□□ -0.9
RNF4-215ENST00000511843 ZNF253O75346 499 aa9.43□□□□□ -0.9
RNF4-215ENST00000511843 DAD1P61803 113 aa9.43□□□□□ -0.9
RNF4-215ENST00000511843 FFAR4Q5NUL3 377 aa9.43□□□□□ -0.9
RNF4-215ENST00000511843 GFI1BQ5VTD9 330 aa9.43□□□□□ -0.9
RNF4-215ENST00000511843 IGKV2-40A0A087WW87 121 aaPredicted RBP9.42□□□□□ -0.9
RNF4-215ENST00000511843 TRAV12-3A0A0B4J271 114 aa9.42□□□□□ -0.9
RNF4-215ENST00000511843 C17orf112F2Z3M2 114 aa9.42□□□□□ -0.9
RNF4-215ENST00000511843 IGKV2D-40P01614 121 aaPredicted RBP9.42□□□□□ -0.9
RNF4-215ENST00000511843 DEFB130BP0DP73 79 aa9.42□□□□□ -0.9
RNF4-215ENST00000511843 DEFB130AP0DP74 79 aa9.42□□□□□ -0.9
RNF4-215ENST00000511843 ICAM4Q14773 271 aa9.42□□□□□ -0.9
RNF4-215ENST00000511843 FAM122CQ6P4D5 195 aa9.42□□□□□ -0.9
RNF4-215ENST00000511843 FXYD5Q96DB9 178 aa9.42□□□□□ -0.9
RNF4-215ENST00000511843 ZNF503Q96F45 646 aa9.42□□□□□ -0.9
RNF4-215ENST00000511843 PHYHIPLQ96FC7 376 aa9.42□□□□□ -0.9
RNF4-215ENST00000511843 NDUFAF3Q9BU61 184 aa9.42□□□□□ -0.9
RNF4-215ENST00000511843 KCNIP2Q9NS61 270 aa9.42□□□□□ -0.9
RNF4-215ENST00000511843 TEX48A0A1B0GUV7 120 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 OR7C2O60412 319 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 IFNA5P01569 189 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 NBEAP1P0C6P0 100 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 TSPOP30536 169 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 TAS2R60P59551 318 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 Q5BKY6 102 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 TMEM256Q8N2U0 113 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 SCGB1C1Q8TD33 95 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 PAXXQ9BUH6 204 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 MRPL32Q9BYC8 188 aaKnown RBP9.41□□□□□ -0.9
RNF4-215ENST00000511843 MED28Q9H204 178 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 OR51M1Q9H341 326 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 FUT9Q9Y231 359 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 NACAE9PAV3 2078 aa9.41□□□□□ -0.9
RNF4-215ENST00000511843 LEPP41159 167 aa9.4□□□□□ -0.9
RNF4-215ENST00000511843 PDE6HQ13956 83 aa9.4□□□□□ -0.9
RNF4-215ENST00000511843 OXA1LQ15070 435 aa9.4□□□□□ -0.9
RNF4-215ENST00000511843 TMEM88Q6PEY1 159 aa9.4□□□□□ -0.9
RNF4-215ENST00000511843 RNF141Q8WVD5 230 aa9.4□□□□□ -0.9
RNF4-215ENST00000511843 MRPL53Q96EL3 112 aaKnown RBP9.4□□□□□ -0.9
RNF4-215ENST00000511843 VGLL1Q99990 258 aa9.4□□□□□ -0.9
RNF4-215ENST00000511843 AGPAT4-IT1Q9H0P7 198 aa9.4□□□□□ -0.9
RNF4-215ENST00000511843 DNAH6Q9C0G6 4158 aa9.4□□□□□ -0.9
RNF4-215ENST00000511843 LYRM9A8MSI8 78 aa9.39□□□□□ -0.91
RNF4-215ENST00000511843 H7BYZ3 331 aa9.39□□□□□ -0.91
RNF4-215ENST00000511843 UBE2L3P68036 154 aaKnown RBP9.39□□□□□ -0.91
RNF4-215ENST00000511843 CD300CQ08708 224 aa9.39□□□□□ -0.91
RNF4-215ENST00000511843 BTN1A1Q13410 526 aa9.39□□□□□ -0.91
RNF4-215ENST00000511843 RNASE8Q8TDE3 154 aaKnown RBP9.39□□□□□ -0.91
RNF4-215ENST00000511843 C16orf74Q96GX8 76 aa9.39□□□□□ -0.91
RNF4-215ENST00000511843 AAMDCQ9H7C9 122 aa9.39□□□□□ -0.91
RNF4-215ENST00000511843 NOP10Q9NPE3 64 aaKnown RBP9.39□□□□□ -0.91
RNF4-215ENST00000511843 PRELID1Q9Y255 219 aa9.39□□□□□ -0.91
RNF4-215ENST00000511843 FRAS1Q86XX4 4008 aa9.39□□□□□ -0.91
RNF4-215ENST00000511843 RAB2AP61019 212 aa9.38□□□□□ -0.91
RNF4-215ENST00000511843 RANP62826 216 aaKnown RBP9.38□□□□□ -0.91
RNF4-215ENST00000511843 PRR9Q5T870 116 aa9.38□□□□□ -0.91
RNF4-215ENST00000511843 Q6ZQT7 251 aa9.38□□□□□ -0.91
RNF4-215ENST00000511843 Q8TAT8 98 aa9.38□□□□□ -0.91
RNF4-215ENST00000511843 TMEM263Q8WUH6 116 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms