RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 HAMPP81172 84 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 CLPSL2Q6UWE3 100 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 GAFA1Q96PS6 74 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 CHAC1Q9BUX1 264 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 HEATR1Q9H583 2144 aaKnown RBP4.69□□□□□ -1.66
USP38-203ENST00000511739 THADAQ6YHU6 1953 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 CHKB-CPT1BH3BT56 60 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 MPZP25189 248 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 FOXG1P55316 489 aaPredicted RBP4.68□□□□□ -1.66
USP38-203ENST00000511739 HSD52Q0P140 79 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 OCC1Q8TAD7 63 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 FGFBP3Q8TAT2 258 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 WDR83OSQ9Y284 106 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 ARMS2P0C7Q2 107 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 DSCR8Q96T75 97 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 RIF1Q5UIP0 2472 aaKnown RBP4.68□□□□□ -1.66
USP38-203ENST00000511739 MST1P26927 711 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 RPL18AQ02543 176 aaKnown RBP4.68□□□□□ -1.66
USP38-203ENST00000511739 SAMD5Q5TGI4 173 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 CD177Q8N6Q3 437 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 OBSL1O75147 1896 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 GOLGB1Q14789 3259 aaKnown RBP4.68□□□□□ -1.66
USP38-203ENST00000511739 TIRAPP58753 221 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 LYPD1Q8N2G4 141 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 C15orf53Q8NAA6 179 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 PIFOQ8TCI5 191 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 UBL5Q9BZL1 73 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 ZNF319Q9P2F9 582 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 IGHV1OR15-1A0A075B7D0 117 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 DEFB105AQ8NG35 78 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 C18orf12Q96KH6 178 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 LYZL4Q96KX0 146 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 LAMTOR2Q9Y2Q5 125 aa4.68□□□□□ -1.66
USP38-203ENST00000511739 IGHV2-70DA0A0C4DH43 119 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 TREML4Q6UXN2 200 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 GNB1LQ9BYB4 327 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 SPTAN1Q13813 2472 aaKnown RBP4.67□□□□□ -1.66
USP38-203ENST00000511739 IGHV3-38A0A0C4DH36 116 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 A0A1B0GUS0 222 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 ETDCA0A1B0GVM5 59 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 IGKV1-39P01597 117 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 IGKV1D-39P04432 117 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 IL17DQ8TAD2 202 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 CFPP27918 469 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 RPP25LQ8N5L8 163 aaKnown RBP4.67□□□□□ -1.66
USP38-203ENST00000511739 SRSF8Q9BRL6 282 aaKnown RBP4.67□□□□□ -1.66
USP38-203ENST00000511739 FANCMQ8IYD8 2048 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 I3L3M4 83 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 WISP1O95388 367 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 PFN1P07737 140 aaKnown RBP4.67□□□□□ -1.66
USP38-203ENST00000511739 ZFAND6Q6FIF0 208 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 GGNQ86UU5 652 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 PAQR4Q8N4S7 273 aaPredicted RBP4.67□□□□□ -1.66
USP38-203ENST00000511739 DMRT1Q9Y5R6 373 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 COX11Q9Y6N1 276 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 BUB3O43684 328 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 ELANEP08246 267 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 CDKN1BP46527 198 aa4.67□□□□□ -1.66
USP38-203ENST00000511739 NEGR1Q7Z3B1 354 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 BCL6BQ8N143 479 aaPredicted RBP4.66□□□□□ -1.66
USP38-203ENST00000511739 FANCD2OSQ96PS1 177 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 MRPL27Q9P0M9 148 aaKnown RBP4.66□□□□□ -1.66
USP38-203ENST00000511739 ETV2O00321 342 aaPredicted RBP4.66□□□□□ -1.66
USP38-203ENST00000511739 IGKV1D-12P01611 117 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 CFHR2P36980 270 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 FREM3P0C091 2139 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 A0A087WWC5 75 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 G3V318 75 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 CCL24O00175 119 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 C1QL4Q86Z23 238 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 SIGMAR1Q99720 223 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 TRAV12-2A0A075B6T6 113 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 NDUFB1O75438 58 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 UBE2AP49459 152 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 RHOHQ15669 191 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 CT83Q5H943 113 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 SPATA31B1PQ5VZV4 182 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 TMEM242Q9NWH2 141 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 F8W735 103 aaPredicted RBP4.66□□□□□ -1.66
USP38-203ENST00000511739 HLA-DRB4P13762 266 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 BTCP35070 178 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 Q8NFD4 153 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 TMEM170AQ8WVE7 144 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 HLA-DRB4X5D2U9 266 aa4.66□□□□□ -1.66
USP38-203ENST00000511739 USF3Q68DE3 2245 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 IGKV1-9A0A0C4DH69 117 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 SPART-AS1P0CW21 52 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 GP9P14770 177 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 DEFB113Q30KQ7 82 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 NHLRC3Q5JS37 347 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 RPRMLQ8N4K4 120 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 TP53TG1Q9Y2A0 90 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 TRAV3A0A0B4J244 114 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 IGHV1-24A0A0C4DH33 117 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 NDUFB8O95169 186 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 PCP4P48539 62 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 Q6ZQT7 251 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 TM2D2Q9BX73 214 aa4.65□□□□□ -1.66
USP38-203ENST00000511739 SMKR1H3BMG3 65 aa4.65□□□□□ -1.67
USP38-203ENST00000511739 NDUFA4O00483 81 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms