RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 NISCHQ9Y2I1 1504 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 MED12Q93074 2177 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 MAP1LC3B2A6NCE7 125 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 H3BQV1 296 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 CST7O76096 145 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 COX7CP15954 63 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 RPL35P42766 123 aaKnown RBP0.65□□□□□ -2.31
CHD1-207ENST00000511628 TEN1Q86WV5 123 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 LRRC18Q8N456 261 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 FAM216BQ8N7L0 139 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 SELENOSQ9BQE4 189 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 TMEM138Q9NPI0 162 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 NAT8BQ9UHF3 227 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 LAMTOR2Q9Y2Q5 125 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 NOTCH1P46531 2555 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 CITO14578 2027 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 NCAPD3P42695 1498 aa0.65□□□□□ -2.31
CHD1-207ENST00000511628 AHNAK2Q8IVF2 5795 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 IGLV3-32A0A0A0MS00 114 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 TRDV1A0A1B0GX56 115 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 A0A1W2PRE2 83 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 E7EQ34 232 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 LYRM1O43325 122 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 FAM107AO95990 144 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 PPYP01298 95 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 HAGHLQ6PII5 290 aaPredicted RBP0.64□□□□□ -2.31
CHD1-207ENST00000511628 PLPP5Q8NEB5 264 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 PSMF1Q92530 271 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 RMND5BQ96G75 393 aaPredicted RBP0.64□□□□□ -2.31
CHD1-207ENST00000511628 MCEEQ96PE7 176 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 CCDC32Q9BV29 185 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 WFDC10AQ9H1F0 79 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 TCEAL2Q9H3H9 227 aaPredicted RBP0.64□□□□□ -2.31
CHD1-207ENST00000511628 NIT2Q9NQR4 276 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 SPANXA1Q9NS26 97 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 TNFSF18Q9UNG2 199 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 NUBP2Q9Y5Y2 271 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 ANKRD31Q8N7Z5 1873 aa0.64□□□□□ -2.31
CHD1-207ENST00000511628 NUP210Q8TEM1 1887 aaPredicted RBP0.63□□□□□ -2.31
CHD1-207ENST00000511628 PIK3C2AO00443 1686 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 PBRM1Q86U86 1689 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 RTL9Q8NET4 1388 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 A0A1B0GV72 72 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 GABARAPH6UMI1 98 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 MT-ND6P03923 174 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 S100A11P31949 105 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 NDUFA6P56556 154 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 TFAMQ00059 246 aaKnown RBP0.63□□□□□ -2.31
CHD1-207ENST00000511628 MIR22HGQ0VDD5 57 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 HRCT1Q6UXD1 115 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 FOXI2Q6ZQN5 318 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 LINC00269Q8N2A0 174 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 SMPXQ9UHP9 88 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 FANCMQ8IYD8 2048 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 CNTRLQ7Z7A1 2325 aa0.63□□□□□ -2.31
CHD1-207ENST00000511628 JMJD7-PLA2G4BH0Y9G9 81 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 KPNA4O00629 521 aaPredicted RBP0.62□□□□□ -2.31
CHD1-207ENST00000511628 IFNA21P01568 189 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 PRB4P10163 310 aaPredicted RBP0.62□□□□□ -2.31
CHD1-207ENST00000511628 BCL2P10415 239 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 FABP2P12104 132 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 MRPS36P82909 103 aaKnown RBP0.62□□□□□ -2.31
CHD1-207ENST00000511628 CIRBPQ14011 172 aaKnown RBP0.62□□□□□ -2.31
CHD1-207ENST00000511628 GLIPR1L1Q6UWM5 242 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 TOMM20LQ6UXN7 152 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 ZCCHC23Q6ZST2 131 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 SMIM15Q7Z3B0 74 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 SBSPONQ8IVN8 264 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 OR10AG1Q8NH19 301 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 LIMD2Q9BT23 127 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 SPANXCQ9NY87 97 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 HSPB8Q9UJY1 196 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 ZFC3H1O60293 1989 aaKnown RBP0.62□□□□□ -2.31
CHD1-207ENST00000511628 FBN2P35556 2912 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 PTPRDP23468 1912 aa0.62□□□□□ -2.31
CHD1-207ENST00000511628 PGRMC1O00264 195 aaKnown RBP0.61□□□□□ -2.31
CHD1-207ENST00000511628 CD14P08571 375 aa0.61□□□□□ -2.31
CHD1-207ENST00000511628 SRP9P49458 86 aaKnown RBP0.61□□□□□ -2.31
CHD1-207ENST00000511628 LSM3P62310 102 aaKnown RBP0.61□□□□□ -2.31
CHD1-207ENST00000511628 OR4B1Q8NGF8 309 aa0.61□□□□□ -2.31
CHD1-207ENST00000511628 OR9Q1Q8NGQ5 310 aa0.61□□□□□ -2.31
CHD1-207ENST00000511628 CCL4L1Q8NHW4 92 aa0.61□□□□□ -2.31
CHD1-207ENST00000511628 SKA2Q8WVK7 121 aaPredicted RBP0.61□□□□□ -2.31
CHD1-207ENST00000511628 DIRC1Q969H9 104 aa0.61□□□□□ -2.31
CHD1-207ENST00000511628 DDA1Q9BW61 102 aa0.61□□□□□ -2.31
CHD1-207ENST00000511628 TRAPPC8Q9Y2L5 1435 aa0.61□□□□□ -2.31
CHD1-207ENST00000511628 TANC2Q9HCD6 1990 aa0.61□□□□□ -2.31
CHD1-207ENST00000511628 ASCC3Q8N3C0 2202 aaKnown RBP0.6□□□□□ -2.31
CHD1-207ENST00000511628 TRAV23DV6A0A075B6W5 121 aa0.6□□□□□ -2.31
CHD1-207ENST00000511628 A0A096LPI6 279 aa0.6□□□□□ -2.31
CHD1-207ENST00000511628 IGLV3-1P01715 115 aa0.6□□□□□ -2.31
CHD1-207ENST00000511628 FABP4P15090 132 aa0.6□□□□□ -2.31
CHD1-207ENST00000511628 RPL7P18124 248 aaKnown RBP0.6□□□□□ -2.31
CHD1-207ENST00000511628 DR1Q01658 176 aa0.6□□□□□ -2.31
CHD1-207ENST00000511628 DIAPH2-AS1Q14236 149 aa0.6□□□□□ -2.31
CHD1-207ENST00000511628 VMA21Q3ZAQ7 101 aa0.6□□□□□ -2.31
CHD1-207ENST00000511628 TEX29Q8N6K0 151 aa0.6□□□□□ -2.31
CHD1-207ENST00000511628 LXNQ9BS40 222 aa0.6□□□□□ -2.31
CHD1-207ENST00000511628 HSPB11Q9Y547 144 aa0.6□□□□□ -2.31
CHD1-207ENST00000511628 ERBINQ96RT1 1412 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms