RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 DEFB119Q8N690 84 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 C3orf56Q8N813 242 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 ZNF439Q8NDP4 499 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 MNS1Q8NEH6 495 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 TSPAN32Q96QS1 320 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 NAA38Q9BRA0 125 aaKnown RBP0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 DERL1Q9BUN8 251 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 UCK1Q9HA47 277 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 UBAP1Q9NZ09 502 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 MRPL27Q9P0M9 148 aaKnown RBP0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 Q9Y3F1 56 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 MYO18AQ92614 2054 aaKnown RBP0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 NUP210LQ5VU65 1888 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 MACF1Q9UPN3 7388 aaKnown RBP0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 MYH10P35580 1976 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 MYH2Q9UKX2 1941 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 KMT2DO14686 5537 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 TRBV6-5A0A0K0K1A5 114 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 CLDN24A6NM45 220 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 FABP5P3A8MUU1 101 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 SLC22A1O15245 554 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 HLA-DRB1P01911 266 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 TRGC1P0CF51 173 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 HIST1H2BOP23527 126 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 HIST1H2BBP33778 126 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 ANP32AP39687 249 aaKnown RBP0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 MAGEA12P43365 314 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 RPL5P46777 297 aaKnown RBP0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 HIST1H2BDP58876 126 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 PSME3P61289 254 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 LSM6P62312 80 aaKnown RBP0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 HIST1H2BCP62807 126 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 ELOBQ15370 118 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 KISS1Q15726 138 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 HIST2H2BEQ16778 126 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 DEFB113Q30KQ7 82 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 AADACL3Q5VUY0 350 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 LPCAT3Q6P1A2 487 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 UNQ6190/PRO20217Q6UXQ8 127 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 FP248Q71RG6 208 aaPredicted RBP0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 C20orf196Q8IYI0 205 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 CLDN22Q8N7P3 220 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 ZNF676Q8N7Q3 588 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 OR13C4Q8NGS5 318 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 PFN4Q8NHR9 129 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 RASSF5Q8WWW0 418 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 ANP32BQ92688 251 aaKnown RBP0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 HIST1H2BHQ93079 126 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 Q96M85 177 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 HIST1H2BNQ99877 126 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 HIST1H2BMQ99879 126 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 RETNLBQ9BQ08 111 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 MRPL32Q9BYC8 188 aaKnown RBP0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 FAM96AQ9H5X1 160 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 PRTFDC1Q9NRG1 225 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 FBXL12Q9NXK8 326 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 VPS29Q9UBQ0 182 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 PLECQ15149 4684 aaKnown RBP0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 MED12Q93074 2177 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 FAT1Q14517 4588 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 DNAH10Q8IVF4 4471 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 APOBP04114 4563 aaKnown RBP0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 MYH8P13535 1937 aa0.74□□□□□ -2.29
SCAMP1-204ENST00000511551 NUP210Q8TEM1 1887 aaPredicted RBP0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 DNAJC13O75165 2243 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 FAAHO00519 579 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 MRPS14O60783 128 aaKnown RBP0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 E2F6O75461 281 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 LYPLA2O95372 231 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 TNNC2P02585 160 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 TTRP02766 147 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 KRTAP2-3P0C7H8 128 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 RPS4Y1P22090 263 aaKnown RBP0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 RUNX1Q01196 453 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 NDUFA5Q16718 116 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 HIST2H3PS2Q5TEC6 136 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 RPL22L1Q6P5R6 122 aaKnown RBP0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 Q6ZSA8 131 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 Q8N2B8 174 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 C11orf40Q8WZ69 217 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 CCDC42Q96M95 316 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 PPP1R2P1Q96PQ5 205 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 NIPSNAP1Q9BPW8 284 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 KRTAP2-4Q9BYR9 128 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 CST9LQ9H4G1 147 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 BAIAP2Q9UQB8 552 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 PKIGQ9Y2B9 76 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 TMEM56-RWDD3S4R434 201 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 DNAH3Q8TD57 4116 aa0.73□□□□□ -2.29
SCAMP1-204ENST00000511551 PLXNA2O75051 1894 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 TRAV26-2A0A0B4J265 109 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 IGKV2-29A2NJV5 120 aaPredicted RBP0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 DPRXA6NFQ7 191 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 GOLGA6L19H0YKK7 550 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 ORC5O43913 435 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 TNFSF15O95150 251 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 SHBGP04278 402 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 TCRBP04435 133 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 RPS17P08708 135 aaKnown RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms