RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 HBG1P69891 147 aa12.68□□□□□ -0.38
TPM3-220ENST00000509601 HBG2P69892 147 aa12.68□□□□□ -0.38
TPM3-220ENST00000509601 BAXQ07812 192 aa12.68□□□□□ -0.38
TPM3-220ENST00000509601 PXMP4Q9Y6I8 212 aa12.68□□□□□ -0.38
TPM3-220ENST00000509601 LYRM9A8MSI8 78 aa12.67□□□□□ -0.38
TPM3-220ENST00000509601 INMT-MINDY4F8WBC2 141 aa12.67□□□□□ -0.38
TPM3-220ENST00000509601 FGF7P21781 194 aa12.67□□□□□ -0.38
TPM3-220ENST00000509601 TAS2R60P59551 318 aa12.67□□□□□ -0.38
TPM3-220ENST00000509601 TMEM256Q8N2U0 113 aa12.67□□□□□ -0.38
TPM3-220ENST00000509601 PFDN5Q99471 154 aa12.67□□□□□ -0.38
TPM3-220ENST00000509601 PARD6GQ9BYG4 376 aaPredicted RBP12.67□□□□□ -0.38
TPM3-220ENST00000509601 NMES1Q9C002 83 aa12.67□□□□□ -0.38
TPM3-220ENST00000509601 PTTG2Q9NZH5 202 aa12.67□□□□□ -0.38
TPM3-220ENST00000509601 OR5AC2Q9NZP5 309 aa12.67□□□□□ -0.38
TPM3-220ENST00000509601 PKD1P98161 4303 aa12.67□□□□□ -0.38
TPM3-220ENST00000509601 GUK1Q16774 197 aa12.66□□□□□ -0.38
TPM3-220ENST00000509601 GCSAMLQ5JQS6 135 aa12.66□□□□□ -0.38
TPM3-220ENST00000509601 MARVELD1Q9BSK0 173 aa12.66□□□□□ -0.38
TPM3-220ENST00000509601 E5RGE8 158 aa12.65□□□□□ -0.38
TPM3-220ENST00000509601 PRAF2O60831 178 aa12.65□□□□□ -0.38
TPM3-220ENST00000509601 RLN2P04090 185 aa12.65□□□□□ -0.38
TPM3-220ENST00000509601 CT45A10P0DMU9 189 aa12.65□□□□□ -0.38
TPM3-220ENST00000509601 TMEM88Q6PEY1 159 aa12.65□□□□□ -0.38
TPM3-220ENST00000509601 OR5C1Q8NGR4 320 aa12.65□□□□□ -0.38
TPM3-220ENST00000509601 OR10J6PQ8NGY7 276 aa12.65□□□□□ -0.38
TPM3-220ENST00000509601 NPCDR1Q9BY65 106 aa12.65□□□□□ -0.38
TPM3-220ENST00000509601 TMEM14CQ9P0S9 112 aa12.65□□□□□ -0.38
TPM3-220ENST00000509601 KIAA1109Q2LD37 5005 aa12.65□□□□□ -0.38
TPM3-220ENST00000509601 TRBV19A0A075B6N1 114 aa12.64□□□□□ -0.39
TPM3-220ENST00000509601 ZNF253O75346 499 aa12.64□□□□□ -0.39
TPM3-220ENST00000509601 MPDU1O75352 247 aa12.64□□□□□ -0.39
TPM3-220ENST00000509601 NDUFB4O95168 129 aa12.64□□□□□ -0.39
TPM3-220ENST00000509601 DEFB130BP0DP73 79 aa12.64□□□□□ -0.39
TPM3-220ENST00000509601 DEFB130AP0DP74 79 aa12.64□□□□□ -0.39
TPM3-220ENST00000509601 HTN1P15515 57 aa12.64□□□□□ -0.39
TPM3-220ENST00000509601 H7BYZ3 331 aa12.63□□□□□ -0.39
TPM3-220ENST00000509601 HIST1H1EP10412 219 aaKnown RBP12.63□□□□□ -0.39
TPM3-220ENST00000509601 H2BFSP57053 126 aa12.63□□□□□ -0.39
TPM3-220ENST00000509601 LRRC37A5PQ49AS3 106 aa12.63□□□□□ -0.39
TPM3-220ENST00000509601 GFI1BQ5VTD9 330 aa12.63□□□□□ -0.39
TPM3-220ENST00000509601 THAP6Q8TBB0 222 aa12.63□□□□□ -0.39
TPM3-220ENST00000509601 C20orf144Q9BQM9 153 aa12.63□□□□□ -0.39
TPM3-220ENST00000509601 SLC25A31Q9H0C2 315 aa12.63□□□□□ -0.39
TPM3-220ENST00000509601 PKHD1P08F94 4074 aa12.62□□□□□ -0.39
TPM3-220ENST00000509601 NPIPB6E9PJ23 425 aa12.62□□□□□ -0.39
TPM3-220ENST00000509601 M0R2N4 97 aa12.62□□□□□ -0.39
TPM3-220ENST00000509601 M0R3E3 92 aa12.62□□□□□ -0.39
TPM3-220ENST00000509601 PYYP10082 97 aa12.62□□□□□ -0.39
TPM3-220ENST00000509601 CYCSP99999 105 aaKnown RBP12.62□□□□□ -0.39
TPM3-220ENST00000509601 ZNF493Q6ZR52 646 aa12.62□□□□□ -0.39
TPM3-220ENST00000509601 RNASE8Q8TDE3 154 aaKnown RBP12.62□□□□□ -0.39
TPM3-220ENST00000509601 C16orf74Q96GX8 76 aa12.62□□□□□ -0.39
TPM3-220ENST00000509601 FAM167A-AS1Q96KT0 104 aa12.62□□□□□ -0.39
TPM3-220ENST00000509601 CBY3A6NI87 242 aa12.61□□□□□ -0.39
TPM3-220ENST00000509601 RNF212Q495C1 297 aa12.61□□□□□ -0.39
TPM3-220ENST00000509601 MRPL53Q96EL3 112 aaKnown RBP12.61□□□□□ -0.39
TPM3-220ENST00000509601 ODF3Q96PU9 254 aa12.61□□□□□ -0.39
TPM3-220ENST00000509601 SLC25A2Q9BXI2 301 aa12.61□□□□□ -0.39
TPM3-220ENST00000509601 WDR61Q9GZS3 305 aaKnown RBP12.61□□□□□ -0.39
TPM3-220ENST00000509601 TIMM8BQ9Y5J9 83 aaPredicted RBP12.61□□□□□ -0.39
TPM3-220ENST00000509601 CLINT1Q14677 625 aa12.6□□□□□ -0.39
TPM3-220ENST00000509601 LGALS9BQ3B8N2 356 aa12.6□□□□□ -0.39
TPM3-220ENST00000509601 MIR17HGQ75NE6 70 aa12.6□□□□□ -0.39
TPM3-220ENST00000509601 TMEM263Q8WUH6 116 aaKnown RBP12.6□□□□□ -0.39
TPM3-220ENST00000509601 PPP1R1CQ8WVI7 109 aa12.6□□□□□ -0.39
TPM3-220ENST00000509601 NOP10Q9NPE3 64 aaKnown RBP12.6□□□□□ -0.39
TPM3-220ENST00000509601 NACAE9PAV3 2078 aa12.59□□□□□ -0.39
TPM3-220ENST00000509601 J3KRW8 73 aa12.59□□□□□ -0.39
TPM3-220ENST00000509601 RTL8CO15255 209 aa12.59□□□□□ -0.39
TPM3-220ENST00000509601 ERCC8Q13216 396 aa12.59□□□□□ -0.39
TPM3-220ENST00000509601 PDE6HQ13956 83 aa12.59□□□□□ -0.39
TPM3-220ENST00000509601 Q6ZR54 194 aa12.59□□□□□ -0.39
TPM3-220ENST00000509601 EXOC3-AS1Q8N2X6 119 aa12.59□□□□□ -0.39
TPM3-220ENST00000509601 BLNKQ8WV28 456 aa12.59□□□□□ -0.39
TPM3-220ENST00000509601 FAM19A4Q96LR4 140 aa12.59□□□□□ -0.39
TPM3-220ENST00000509601 AGPAT4-IT1Q9H0P7 198 aa12.59□□□□□ -0.39
TPM3-220ENST00000509601 TIMM9Q9Y5J7 89 aa12.59□□□□□ -0.39
TPM3-220ENST00000509601 TRAV12-3A0A0B4J271 114 aa12.58□□□□□ -0.4
TPM3-220ENST00000509601 F5H768 121 aa12.58□□□□□ -0.4
TPM3-220ENST00000509601 MPC2O95563 127 aa12.58□□□□□ -0.4
TPM3-220ENST00000509601 ATP5G1P05496 136 aa12.58□□□□□ -0.4
TPM3-220ENST00000509601 LEPP41159 167 aa12.58□□□□□ -0.4
TPM3-220ENST00000509601 ATP5G3P48201 142 aa12.58□□□□□ -0.4
TPM3-220ENST00000509601 LINC00336Q6ZUF6 198 aa12.58□□□□□ -0.4
TPM3-220ENST00000509601 UBE2DNLQ8IWF7 75 aa12.58□□□□□ -0.4
TPM3-220ENST00000509601 LINC00612Q8N6U2 182 aa12.58□□□□□ -0.4
TPM3-220ENST00000509601 C15orf53Q8NAA6 179 aa12.58□□□□□ -0.4
TPM3-220ENST00000509601 PRELID1Q9Y255 219 aa12.58□□□□□ -0.4
TPM3-220ENST00000509601 IGLV2-18A0A075B6J9 118 aa12.57□□□□□ -0.4
TPM3-220ENST00000509601 A0A1B0GVY2 172 aa12.57□□□□□ -0.4
TPM3-220ENST00000509601 NBEAP1P0C6P0 100 aa12.57□□□□□ -0.4
TPM3-220ENST00000509601 LINC00477Q96M19 166 aa12.57□□□□□ -0.4
TPM3-220ENST00000509601 OR51M1Q9H341 326 aa12.57□□□□□ -0.4
TPM3-220ENST00000509601 SSNA1O43805 119 aa12.56□□□□□ -0.4
TPM3-220ENST00000509601 ZNF324O75467 553 aaPredicted RBP12.56□□□□□ -0.4
TPM3-220ENST00000509601 DEFA1P59665 94 aa12.56□□□□□ -0.4
TPM3-220ENST00000509601 DEFA3P59666 94 aa12.56□□□□□ -0.4
TPM3-220ENST00000509601 CCDC28AQ8IWP9 274 aa12.56□□□□□ -0.4
TPM3-220ENST00000509601 KLLNB2CW77 178 aa12.55□□□□□ -0.4
TPM3-220ENST00000509601 SLC25A5P05141 298 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms